Conservation of cofitness between CSW01_06530 and CSW01_11930 in Vibrio cholerae E7946 ATCC 55056

71 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_06530 aromatic amino acid aminotransferase 1.0 CSW01_11930 peroxide stress protein YaaA 0.61 13
Shewanella sp. ANA-3 0.66 Shewana3_2121 aromatic amino acid aminotransferase (RefSeq) 0.65 Shewana3_3143 hypothetical protein (RefSeq) low > 73
Enterobacter sp. TBS_079 0.66 MPMX20_01586 Aspartate aminotransferase 0.68 MPMX20_00714 Peroxide stress resistance protein YaaA low > 85
Shewanella loihica PV-4 0.66 Shew_1999 aromatic amino acid aminotransferase (RefSeq) 0.71 Shew_1093 hypothetical protein (RefSeq) low > 60
Enterobacter asburiae PDN3 0.66 EX28DRAFT_2008 Aspartate/tyrosine/aromatic aminotransferase 0.68 EX28DRAFT_3618 Uncharacterized protein conserved in bacteria low > 76
Shewanella amazonensis SB2B 0.65 Sama_1805 aromatic amino acid aminotransferase (RefSeq) 0.71 Sama_0917 hypothetical protein (RefSeq) low > 62
Shewanella oneidensis MR-1 0.65 SO2350 aspC-1 aspartate aminotransferase (NCBI ptt file) 0.63 SO3540 conserved hypothetical protein (NCBI ptt file) low > 76
Pantoea agglomerans CFBP13505 P0401 0.65 PagCFBP13505_RS04565 aspartate/tyrosine/aromatic aminotransferase 0.66 PagCFBP13505_RS21905 peroxide stress protein YaaA low > 74
Escherichia coli ECRC62 0.65 BNILDI_20195 aspC aspartate transaminase 0.69 BNILDI_08185 yaaA peroxide stress protein YaaA low > 75
Escherichia coli Nissle 1917 0.65 ECOLIN_RS04910 aspartate transaminase 0.69 ECOLIN_RS00035 peroxide stress protein YaaA — —
Klebsiella michiganensis M5al 0.65 BWI76_RS09870 aromatic amino acid aminotransferase 0.69 BWI76_RS04260 peroxide stress protein YaaA low > 92
Erwinia amylovora T8 0.65 OLJFJH_16045 aromatic amino acid aminotransferase 0.64 OLJFJH_01480 peroxide stress protein YaaA low > 58
Escherichia fergusonii Becca 0.65 EFB2_03136 Aspartate aminotransferase 0.69 EFB2_04037 Peroxide stress resistance protein YaaA low > 86
Escherichia coli ECOR38 0.65 HEPCGN_23140 aspC aspartate transaminase 0.69 HEPCGN_09095 yaaA peroxide stress protein YaaA low > 88
Escherichia coli HS(pFamp)R (ATCC 700891) 0.65 OHPLBJKB_02738 Aspartate aminotransferase 0.69 OHPLBJKB_03654 hypothetical protein low > 74
Escherichia coli BL21 0.65 ECD_00932 aspartate aminotransferase, PLP-dependent 0.69 ECD_00006 peroxide resistance protein, lowers intracellular iron — —
Escherichia coli BW25113 0.65 b0928 aspC aspartate aminotransferase, PLP-dependent (NCBI) 0.69 b0006 yaaA hypothetical protein (NCBI) low > 76
Escherichia coli ECOR27 0.65 NOLOHH_21940 aspC aspartate transaminase 0.69 NOLOHH_03420 yaaA peroxide stress protein YaaA low > 76
Klebsiella pneumoniae MKP103 0.64 KDGMDA_18070 Aspartate aminotransferase 0.68 KDGMDA_12530 peroxide stress protein YaaA low > 95
Erwinia tracheiphila HP pepo 2.2 0.64 IJEDHG_20410 aromatic amino acid aminotransferase 0.65 IJEDHG_06285 yaaA peroxide stress protein YaaA low > 61
Escherichia coli ECRC99 0.64 KEDOAH_22350 aspC aspartate transaminase 0.69 KEDOAH_17065 yaaA peroxide stress protein YaaA — —
Escherichia coli ECRC101 0.64 MCAODC_24775 aspC aspartate transaminase 0.69 MCAODC_01605 yaaA peroxide stress protein YaaA low > 88
Escherichia coli ECRC98 0.64 JDDGAC_08995 aspC aspartate transaminase 0.69 JDDGAC_14685 yaaA peroxide stress protein YaaA low > 87
Escherichia coli ECRC100 0.64 OKFHMN_05385 aspC aspartate transaminase 0.69 OKFHMN_11090 yaaA peroxide stress protein YaaA low > 79
Erwinia tracheiphila SCR3 0.64 LU632_RS09905 aspartate/tyrosine/aromatic aminotransferase 0.65 LU632_RS02625 yaaA peroxide stress protein YaaA low > 74
Escherichia coli ECRC102 0.64 NIAGMN_03105 aspC aspartate transaminase 0.69 NIAGMN_08940 yaaA peroxide stress protein YaaA low > 80
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.64 GFF3685 Aspartate aminotransferase (EC 2.6.1.1) 0.69 GFF1081 UPF0246 protein YaaA low > 78
Rahnella sp. WP5 0.64 EX31_RS18145 aspartate/tyrosine/aromatic aminotransferase 0.64 EX31_RS03930 peroxide stress protein YaaA low > 89
Pantoea sp. MT58 0.64 IAI47_12765 aspartate/tyrosine/aromatic aminotransferase 0.66 IAI47_16200 peroxide stress protein YaaA low > 76
Dickeya dianthicola 67-19 0.64 HGI48_RS12990 aspartate/tyrosine/aromatic aminotransferase 0.66 HGI48_RS18330 peroxide stress protein YaaA low > 71
Serratia liquefaciens MT49 0.63 IAI46_08750 aspartate/tyrosine/aromatic aminotransferase 0.68 IAI46_03045 peroxide stress protein YaaA low > 86
Dickeya dadantii 3937 0.63 DDA3937_RS12915 aspartate/tyrosine/aromatic aminotransferase 0.66 DDA3937_RS18400 peroxide stress protein YaaA low > 74
Dickeya dianthicola ME23 0.63 DZA65_RS13450 aspartate/tyrosine/aromatic aminotransferase 0.66 DZA65_RS19470 peroxide stress protein YaaA low > 75
Pectobacterium carotovorum WPP14 0.63 HER17_RS12030 aspartate/tyrosine/aromatic aminotransferase 0.68 HER17_RS02810 peroxide stress protein YaaA low > 75
Pseudomonas segetis P6 0.49 MPMX49_03092 Aromatic-amino-acid aminotransferase 0.63 MPMX49_03565 Peroxide stress resistance protein YaaA low > 75
Pseudomonas sp. BP01 0.47 JOY50_RS16720 amino acid aminotransferase 0.62 JOY50_RS15345 yaaA peroxide stress protein YaaA low > 84
Pseudomonas putida KT2440 0.47 PP_1972 aromatic-amino-acid aminotransferase 0.62 PP_1289 conserved protein of unknown function, DUF328 family low > 96
Pseudomonas fluorescens FW300-N2E2 0.47 Pf6N2E2_50 Biosynthetic Aromatic amino acid aminotransferase alpha (EC 2.6.1.57) @ Aromatic-amino-acid aminotransferase (EC 2.6.1.57) 0.62 Pf6N2E2_5389 UPF0246 protein YaaA low > 103
Pseudomonas simiae WCS417 0.46 PS417_18690 aromatic amino acid aminotransferase 0.62 PS417_04850 hypothetical protein low > 88
Cupriavidus basilensis FW507-4G11 0.46 RR42_RS05990 aromatic amino acid aminotransferase 0.53 RR42_RS05780 hypothetical protein low > 128
Hydrogenophaga sp. GW460-11-11-14-LB1 0.46 GFF4777 Biosynthetic Aromatic amino acid aminotransferase alpha (EC 2.6.1.57) @ Aromatic-amino-acid aminotransferase (EC 2.6.1.57) @ Aspartate aminotransferase (EC 2.6.1.1) 0.55 GFF720 UPF0246 protein YaaA — —
Pseudomonas sp. DMC3 0.46 GFF773 Aromatic-amino-acid aminotransferase 0.64 GFF1922 Peroxide stress resistance protein YaaA low > 89
Paraburkholderia graminis OAS925 0.46 ABIE53_001644 aromatic-amino-acid transaminase 0.58 ABIE53_001622 cytoplasmic iron level regulating protein YaaA (DUF328/UPF0246 family) low > 113
Acidovorax sp. GW101-3H11 0.46 Ac3H11_4115 Aromatic-amino-acid aminotransferase (EC 2.6.1.57) 0.56 Ac3H11_1593 UPF0246 protein YaaA — —
Burkholderia phytofirmans PsJN 0.46 BPHYT_RS06900 aspartate aminotransferase 0.56 BPHYT_RS06780 hypothetical protein low > 109
Pseudomonas fluorescens GW456-L13 0.46 PfGW456L13_3960 Biosynthetic Aromatic amino acid aminotransferase alpha (EC 2.6.1.57) @ Aromatic-amino-acid aminotransferase (EC 2.6.1.57) 0.64 PfGW456L13_1686 UPF0246 protein YaaA low > 87
Pseudomonas sp. SVBP6 0.46 COO64_RS05735 amino acid aminotransferase 0.61 COO64_RS11605 yaaA peroxide stress protein YaaA low > 93
Pseudomonas fluorescens SBW25 0.46 PFLU_RS20660 aspartate/tyrosine/aromatic aminotransferase 0.62 PFLU_RS04920 peroxide stress protein YaaA low > 109
Pseudomonas fluorescens SBW25-INTG 0.46 PFLU_RS20660 aspartate/tyrosine/aromatic aminotransferase 0.62 PFLU_RS04920 peroxide stress protein YaaA low > 109
Pseudomonas stutzeri RCH2 0.46 Psest_1295 Aspartate/tyrosine/aromatic aminotransferase 0.62 Psest_3173 Uncharacterized protein conserved in bacteria low > 67
Pseudomonas sp. S08-1 0.46 OH686_04585 Biosynthetic Aromatic amino acid aminotransferase alpha or Aromatic-amino-acid aminotransferase 0.63 OH686_07085 UPF0246 protein YaaA low > 80
Pseudomonas fluorescens FW300-N2E3 0.46 AO353_20540 aromatic amino acid aminotransferase 0.64 AO353_04675 hypothetical protein low > 101
Castellaniella sp019104865 MT123 0.46 ABCV34_RS05115 amino acid aminotransferase 0.50 ABCV34_RS01170 peroxide stress protein YaaA — —
Paraburkholderia sabiae LMG 24235 0.46 QEN71_RS23875 amino acid aminotransferase 0.56 QEN71_RS24000 peroxide stress protein YaaA low > 153
Ralstonia solanacearum PSI07 0.46 RPSI07_RS19245 aspartate/tyrosine/aromatic aminotransferase 0.57 RPSI07_RS14595 peroxide stress protein YaaA low > 81
Pseudomonas sp. RS175 0.46 PFR28_02838 Aromatic-amino-acid aminotransferase 0.64 PFR28_03554 Peroxide stress resistance protein YaaA low > 88
Variovorax sp. SCN45 0.46 GFF944 Aromatic-amino-acid aminotransferase (EC 2.6.1.57) 0.50 GFF6020 UPF0246 protein YaaA low > 127
Pseudomonas fluorescens FW300-N2C3 0.46 AO356_21330 aromatic amino acid aminotransferase 0.62 AO356_17320 hypothetical protein low > 104
Ralstonia solanacearum GMI1000 0.46 RS_RS05000 aspartate/tyrosine/aromatic aminotransferase 0.58 RS_RS10095 peroxide stress protein YaaA — —
Pseudomonas fluorescens FW300-N1B4 0.46 Pf1N1B4_27 Biosynthetic Aromatic amino acid aminotransferase alpha (EC 2.6.1.57) @ Aromatic-amino-acid aminotransferase (EC 2.6.1.57) 0.64 Pf1N1B4_981 UPF0246 protein YaaA low > 87
Paraburkholderia bryophila 376MFSha3.1 0.46 H281DRAFT_04974 aromatic-amino-acid transaminase 0.57 H281DRAFT_04599 hypothetical protein low > 103
Variovorax sp. OAS795 0.46 ABID97_RS13990 amino acid aminotransferase 0.50 ABID97_RS07905 peroxide stress protein YaaA low > 91
Dechlorosoma suillum PS 0.46 Dsui_2433 aspartate/tyrosine/aromatic aminotransferase 0.55 Dsui_2322 hypothetical protein low > 51
Pseudomonas lactucae CFBP13502 0.46 GEMAOFIL_03965 Aromatic-amino-acid aminotransferase 0.62 GEMAOFIL_01173 Peroxide stress resistance protein YaaA low > 93
Ralstonia sp. UNC404CL21Col 0.45 ABZR87_RS09935 amino acid aminotransferase 0.59 ABZR87_RS14635 peroxide stress protein YaaA low > 80
Pseudomonas aeruginosa PA14 0.45 IKLFDK_15990 Aspartate aminotransferase 0.64 IKLFDK_18065 peroxide stress protein YaaA low > 100
Ralstonia solanacearum IBSBF1503 0.45 RALBFv3_RS14220 aspartate/tyrosine/aromatic aminotransferase 0.57 RALBFv3_RS02720 peroxide stress protein YaaA — —
Ralstonia solanacearum UW163 0.45 UW163_RS11685 aspartate/tyrosine/aromatic aminotransferase 0.57 UW163_RS11005 peroxide stress protein YaaA — —
Pseudomonas syringae pv. syringae B728a 0.44 Psyr_1973 Aspartate transaminase 0.64 Psyr_1064 Protein of unknown function DUF328 low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.44 Psyr_1973 Aspartate transaminase 0.64 Psyr_1064 Protein of unknown function DUF328 low > 86
Acinetobacter radioresistens SK82 0.43 MPMX26_01473 Aromatic-amino-acid aminotransferase 0.65 MPMX26_02017 Peroxide stress resistance protein YaaA low > 36
Acinetobacter baumannii LAC-4 0.43 RR41_RS18495 aspartate/tyrosine/aromatic aminotransferase 0.67 RR41_RS06265 peroxide stress protein YaaA low > 55

Not shown: 7 genomes with orthologs for CSW01_06530 only; 16 genomes with orthologs for CSW01_11930 only