Conservation of cofitness between CSW01_03920 and CSW01_11920 in Vibrio cholerae E7946 ATCC 55056

22 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_03920 peptidase B 1.0 CSW01_11920 NupC/NupG family nucleoside CNT transporter 0.90 8
Serratia liquefaciens MT49 0.63 IAI46_19320 aminopeptidase PepB 0.69 IAI46_02905 NupC/NupG family nucleoside CNT transporter low > 87
Escherichia coli ECRC101 0.62 MCAODC_12185 pepB aminopeptidase PepB 0.47 MCAODC_14525 nupX Putative nucleoside permease NupX low > 87
Escherichia coli ECRC62 0.62 BNILDI_12125 pepB aminopeptidase PepB 0.47 BNILDI_13970 nupX Putative nucleoside permease NupX low > 75
Escherichia coli ECRC100 0.62 OKFHMN_21655 pepB aminopeptidase PepB 0.47 OKFHMN_23475 nupX Putative nucleoside permease NupX 0.56 25
Escherichia coli ECRC99 0.62 KEDOAH_06565 pepB aminopeptidase PepB 0.47 KEDOAH_04710 nupX Putative nucleoside permease NupX — —
Escherichia coli ECRC98 0.62 JDDGAC_25330 pepB aminopeptidase PepB 0.47 JDDGAC_27435 nupX Putative nucleoside permease NupX low > 87
Escherichia coli ECRC102 0.62 NIAGMN_19425 pepB aminopeptidase PepB 0.47 NIAGMN_21240 nupX Putative nucleoside permease NupX 0.50 51
Escherichia coli BL21 0.62 ECD_02415 aminopeptidase B 0.46 ECD_02090 nucleoside permease low > 61
Escherichia coli ECOR27 0.62 NOLOHH_13325 pepB aminopeptidase PepB 0.47 NOLOHH_15035 psuT Putative pseudouridine transporter low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.62 OHPLBJKB_01186 Peptidase B 0.47 OHPLBJKB_01550 Putative nucleoside permease NupX low > 74
Escherichia coli BW25113 0.61 b2523 pepB putative peptidase (VIMSS) 0.47 b2161 yeiJ predicted nucleoside transporter (NCBI) low > 76
Escherichia coli Nissle 1917 0.61 ECOLIN_RS14330 aminopeptidase PepB 0.47 ECOLIN_RS12660 NupC/NupG family nucleoside CNT transporter low > 55
Escherichia fergusonii Becca 0.61 EFB2_01367 Peptidase B 0.47 EFB2_01693 Putative pseudouridine transporter low > 86
Klebsiella pneumoniae MKP103 0.61 KDGMDA_28250 aminopeptidase PepB 0.70 KDGMDA_12395 NupC/NupG family nucleoside CNT transporter low > 95
Klebsiella michiganensis M5al 0.61 BWI76_RS21125 aminopeptidase PepB 0.69 BWI76_RS04125 NupC/NupG family nucleoside CNT transporter low > 92
Escherichia coli ECOR38 0.60 HEPCGN_20795 pepB aminopeptidase PepB 0.47 HEPCGN_22740 nupX Putative nucleoside permease NupX low > 88
Pectobacterium carotovorum WPP14 0.58 HER17_RS06050 aminopeptidase PepB 0.67 HER17_RS19040 NupC/NupG family nucleoside CNT transporter low > 75
Alteromonas macleodii MIT1002 0.45 MIT1002_03688 Peptidase B 0.57 MIT1002_03499 Nucleoside permease NupX low > 70
Shewanella amazonensis SB2B 0.44 Sama_0782 aminopeptidase B (RefSeq) 0.66 Sama_0971 nucleoside transporter (RefSeq) low > 62
Shewanella oneidensis MR-1 0.43 SO0876 pepB peptidase B (NCBI ptt file) 0.65 SO1214 NupC family protein (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.42 Shew_3127 aminopeptidase B (RefSeq) 0.66 Shew_2817 nucleoside transporter (RefSeq) — —
Shewanella sp. ANA-3 0.42 Shewana3_3402 aminopeptidase B (RefSeq) 0.65 Shewana3_1039 nucleoside permease (cytidine, inosine, uridine, or thymidine) (from data) low > 73

Not shown: 14 genomes with orthologs for CSW01_03920 only; 4 genomes with orthologs for CSW01_11920 only