Conservation of cofitness between CSW01_01465 and CSW01_11920 in Vibrio cholerae E7946 ATCC 55056

26 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_01465 ketohydroxyglutarate aldolase 1.0 CSW01_11920 NupC/NupG family nucleoside CNT transporter 0.68 8
Serratia liquefaciens MT49 0.44 IAI46_23180 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase 0.69 IAI46_02905 NupC/NupG family nucleoside CNT transporter low > 87
Shewanella oneidensis MR-1 0.44 SO2486 eda 2-deydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase (NCBI ptt file) 0.65 SO1214 NupC family protein (NCBI ptt file) — —
Pectobacterium carotovorum WPP14 0.43 HER17_RS11775 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase 0.67 HER17_RS19040 NupC/NupG family nucleoside CNT transporter low > 75
Shewanella loihica PV-4 0.43 Shew_2045 keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase (RefSeq) 0.66 Shew_2817 nucleoside transporter (RefSeq) — —
Shewanella sp. ANA-3 0.43 Shewana3_2148 keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase (RefSeq) 0.65 Shewana3_1039 nucleoside permease (cytidine, inosine, uridine, or thymidine) (from data) — —
Shewanella amazonensis SB2B 0.42 Sama_1809 keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase (RefSeq) 0.66 Sama_0971 nucleoside transporter (RefSeq) — —
Alteromonas macleodii MIT1002 0.42 MIT1002_02403 KHG/KDPG aldolase 0.57 MIT1002_03499 Nucleoside permease NupX — —
Escherichia coli BL21 0.40 ECD_01821 KHG/KDPG aldolase; 2-dehydro-3-deoxy-phosphogluconate/4-hydroxy-2- oxoglutarate aldolase 0.46 ECD_02090 nucleoside permease — —
Escherichia coli ECRC62 0.40 BNILDI_15650 kdgA bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase 0.47 BNILDI_13970 nupX Putative nucleoside permease NupX low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.40 OHPLBJKB_01879 KHG/KDPG aldolase 0.47 OHPLBJKB_01550 Putative nucleoside permease NupX low > 74
Escherichia coli ECRC102 0.40 NIAGMN_01715 kdgA bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase 0.47 NIAGMN_21240 nupX Putative nucleoside permease NupX — —
Escherichia coli ECRC99 0.40 KEDOAH_01760 kdgA bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase 0.47 KEDOAH_04710 nupX Putative nucleoside permease NupX — —
Escherichia coli ECOR38 0.40 HEPCGN_04750 kdgA bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase 0.47 HEPCGN_22740 nupX Putative nucleoside permease NupX low > 88
Escherichia coli ECRC98 0.40 JDDGAC_00920 kdgA bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase 0.47 JDDGAC_27435 nupX Putative nucleoside permease NupX low > 87
Escherichia coli Nissle 1917 0.40 ECOLIN_RS10305 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase 0.47 ECOLIN_RS12660 NupC/NupG family nucleoside CNT transporter — —
Escherichia fergusonii Becca 0.40 EFB2_02093 KHG/KDPG aldolase 0.47 EFB2_01693 Putative pseudouridine transporter low > 86
Escherichia coli ECRC100 0.40 OKFHMN_26345 kdgA bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase 0.47 OKFHMN_23475 nupX Putative nucleoside permease NupX low > 79
Escherichia coli BW25113 0.40 b1850 eda keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase (NCBI) 0.47 b2161 yeiJ predicted nucleoside transporter (NCBI) low > 76
Escherichia coli ECRC101 0.40 MCAODC_19060 kdgA bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase 0.47 MCAODC_14525 nupX Putative nucleoside permease NupX low > 87
Escherichia coli ECOR27 0.39 NOLOHH_16855 kdgA bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase 0.47 NOLOHH_15035 psuT Putative pseudouridine transporter low > 76
Klebsiella michiganensis M5al 0.38 BWI76_RS18095 ketohydroxyglutarate aldolase 0.69 BWI76_RS04125 NupC/NupG family nucleoside CNT transporter — —
Klebsiella pneumoniae MKP103 0.38 KDGMDA_25360 keto-deoxy-phosphogluconate aldolase 0.70 KDGMDA_12395 NupC/NupG family nucleoside CNT transporter low > 95
Sphingomonas koreensis DSMZ 15582 0.37 Ga0059261_0356 Entner-Doudoroff aldolase 0.48 Ga0059261_2532 Nucleoside permease — —
Sphingobium sp. HT1-2 0.37 GFF1595 4-hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16) @ 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) 0.45 GFF508 Nucleoside permease NupC — —
Burkholderia phytofirmans PsJN 0.33 BPHYT_RS16730 2-dehydro-3-deoxyphosphogluconate aldolase 0.61 BPHYT_RS21960 nucleoside transporter — —
Paraburkholderia bryophila 376MFSha3.1 0.32 H281DRAFT_04277 2-keto-3-deoxy-phosphogluconate aldolase 0.60 H281DRAFT_03110 concentrative nucleoside transporter, CNT family — —

Not shown: 81 genomes with orthologs for CSW01_01465 only; 0 genomes with orthologs for CSW01_11920 only