Conservation of cofitness between CSW01_09950 and CSW01_11225 in Vibrio cholerae E7946 ATCC 55056

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_09950 signal peptide peptidase SppA 1.0 CSW01_11225 flagellar basal body rod protein FlgB 0.66 10
Dickeya dadantii 3937 0.46 DDA3937_RS10290 signal peptide peptidase SppA 0.40 DDA3937_RS13480 flagellar basal body rod protein FlgB low > 74
Dickeya dianthicola 67-19 0.46 HGI48_RS10300 signal peptide peptidase SppA 0.40 HGI48_RS13525 flagellar basal body rod protein FlgB low > 71
Dickeya dianthicola ME23 0.46 DZA65_RS10775 signal peptide peptidase SppA 0.40 DZA65_RS14010 flagellar basal body rod protein FlgB low > 75
Serratia liquefaciens MT49 0.45 IAI46_14325 signal peptide peptidase SppA 0.35 IAI46_15960 flagellar basal body rod protein FlgB low > 87
Pectobacterium carotovorum WPP14 0.44 HER17_RS11105 signal peptide peptidase SppA 0.36 HER17_RS08165 flagellar basal body rod protein FlgB low > 75
Escherichia fergusonii Becca 0.44 EFB2_02228 Protease 4 0.34 EFB2_02901 Flagellar basal body rod protein FlgB low > 86
Escherichia coli ECOR38 0.44 HEPCGN_05185 sppA signal peptide peptidase SppA 0.34 HEPCGN_23815 flgB flagellar basal body rod protein FlgB low > 88
Escherichia coli Nissle 1917 0.44 ECOLIN_RS09855 signal peptide peptidase SppA 0.34 ECOLIN_RS06215 flagellar basal body rod protein FlgB low > 55
Escherichia coli ECOR27 0.43 NOLOHH_17325 sppA signal peptide peptidase SppA 0.34 NOLOHH_21205 flgB flagellar basal body rod protein FlgB low > 76
Escherichia coli ECRC62 0.43 BNILDI_16110 sppA signal peptide peptidase SppA 0.34 BNILDI_19365 flgB flagellar basal body rod protein FlgB low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.43 OHPLBJKB_01966 Protease 4 0.34 OHPLBJKB_02592 Flagellar basal body rod protein FlgB low > 74
Enterobacter sp. TBS_079 0.43 MPMX20_01850 Protease 4 0.37 MPMX20_01752 Flagellar basal body rod protein FlgB low > 85
Rahnella sp. WP5 0.43 EX31_RS06305 signal peptide peptidase SppA 0.39 EX31_RS11315 flagellar basal body rod protein FlgB low > 89
Escherichia coli BL21 0.43 ECD_01735 protease IV (signal peptide peptidase) 0.34 ECD_01069 flagellar component of cell-proximal portion of basal-body rod low > 61
Escherichia coli BW25113 0.43 b1766 sppA protease IV (signal peptide peptidase) (NCBI) 0.34 b1073 flgB flagellar basal-body rod protein B (NCBI) low > 76
Enterobacter asburiae PDN3 0.43 EX28DRAFT_1767 signal peptide peptidase SppA, 67K type 0.37 EX28DRAFT_1859 flagellar basal-body rod protein FlgB low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.43 GFF3483 Signal peptide peptidase SppA (EC 3.4.21.-) 0.36 GFF3354 Flagellar basal-body rod protein FlgB low > 78
Shewanella sp. ANA-3 0.43 Shewana3_1964 signal peptide peptidase SppA, 67K type (RefSeq) 0.47 Shewana3_1321 flgB flagellar basal body rod protein FlgB (RefSeq) — —
Escherichia coli ECRC101 0.42 MCAODC_18595 sppA signal peptide peptidase SppA 0.34 MCAODC_23035 flgB flagellar basal body rod protein FlgB low > 87
Escherichia coli ECRC99 0.42 KEDOAH_01295 sppA signal peptide peptidase SppA 0.34 KEDOAH_24080 flgB flagellar basal body rod protein FlgB — —
Escherichia coli ECRC102 0.42 NIAGMN_01250 sppA signal peptide peptidase SppA 0.34 NIAGMN_24155 flgB flagellar basal body rod protein FlgB — —
Escherichia coli ECRC100 0.42 OKFHMN_26815 sppA signal peptide peptidase SppA 0.34 OKFHMN_03675 flgB flagellar basal body rod protein FlgB low > 79
Escherichia coli ECRC98 0.42 JDDGAC_01390 sppA signal peptide peptidase SppA 0.34 JDDGAC_07335 flgB flagellar basal body rod protein FlgB — —
Shewanella oneidensis MR-1 0.42 SO2420 sppA signal peptide peptidase SppA, 67K type (NCBI ptt file) 0.48 SO3250 flgB flagellar basal-body rod protein FlgB (NCBI ptt file) low > 76
Erwinia amylovora T8 0.42 OLJFJH_13245 signal peptide peptidase SppA 0.37 OLJFJH_15625 flagellar basal body rod protein FlgB low > 58
Pantoea agglomerans CFBP13505 P0401 0.42 PagCFBP13505_RS02805 signal peptide peptidase SppA 0.35 PagCFBP13505_RS05170 flagellar basal body rod protein FlgB low > 74
Pantoea sp. MT58 0.42 IAI47_08970 signal peptide peptidase SppA 0.35 IAI47_12165 flagellar basal body rod protein FlgB low > 76
Erwinia tracheiphila SCR3 0.42 LU632_RS12970 sppA signal peptide peptidase SppA 0.36 LU632_RS10395 flgB flagellar basal body rod protein FlgB low > 73
Erwinia tracheiphila HP pepo 2.2 0.42 IJEDHG_22640 sppA signal peptide peptidase SppA 0.36 IJEDHG_21045 flgB flagellar basal body rod protein FlgB low > 61
Shewanella loihica PV-4 0.41 Shew_1941 signal peptide peptidase SppA, 67K type (RefSeq) 0.56 Shew_1345 flgB flagellar basal body rod protein FlgB (RefSeq) — —
Alteromonas macleodii MIT1002 0.40 MIT1002_01840 Protease 4 0.48 MIT1002_01039 Putative proximal rod protein — —
Shewanella amazonensis SB2B 0.40 Sama_1723 signal peptide peptidase SppA, 67K type (RefSeq) 0.49 Sama_2318 flgB flagellar basal body rod protein FlgB (RefSeq) low > 62
Lysobacter sp. OAE881 0.30 ABIE51_RS02175 signal peptide peptidase SppA 0.27 ABIE51_RS16670 flagellar basal body rod protein FlgB — —
Rhodanobacter sp000427505 FW510-R12 0.30 LRK53_RS03985 signal peptide peptidase SppA 0.31 LRK53_RS15175 flagellar basal body rod protein FlgB low > 59
Dyella japonica UNC79MFTsu3.2 0.29 ABZR86_RS12520 signal peptide peptidase SppA 0.37 ABZR86_RS20075 flagellar basal body rod protein FlgB low > 74
Rhodanobacter denitrificans MT42 0.28 LRK55_RS10795 signal peptide peptidase SppA 0.34 LRK55_RS13145 flagellar basal body rod protein FlgB low > 63
Rhodanobacter denitrificans FW104-10B01 0.28 LRK54_RS11090 signal peptide peptidase SppA 0.34 LRK54_RS13405 flagellar basal body rod protein FlgB low > 59
Rhodanobacter sp. FW510-T8 0.28 OKGIIK_12785 sppA signal peptide peptidase SppA 0.34 OKGIIK_02650 flgB flagellar basal body rod protein FlgB low > 53
Sphingobium sp. HT1-2 0.28 GFF1301 Signal peptide peptidase SppA (protease 4) 0.30 GFF3714 Flagellar basal-body rod protein FlgB low > 95
Sphingomonas koreensis DSMZ 15582 0.27 Ga0059261_1351 signal peptide peptidase SppA, 67K type 0.31 Ga0059261_2089 flagellar basal-body rod protein FlgB low > 68

Not shown: 24 genomes with orthologs for CSW01_09950 only; 41 genomes with orthologs for CSW01_11225 only