Conservation of cofitness between CSW01_02215 and CSW01_11220 in Vibrio cholerae E7946 ATCC 55056

84 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_02215 carbon-nitrogen hydrolase family protein 1.0 CSW01_11220 flagellar basal body rod protein FlgC 0.67 17
Serratia liquefaciens MT49 0.49 IAI46_22690 carbon-nitrogen hydrolase family protein 0.41 IAI46_15955 flagellar basal body rod protein FlgC low > 87
Pseudomonas sp. S08-1 0.45 OH686_08585 Uncharacterized subgroup of the nitrilase superfamily 0.51 OH686_02970 flagellar basal-body rod protein FlgC low > 80
Shewanella oneidensis MR-1 0.44 SO4092 hydrolase, carbon-nitrogen family (NCBI ptt file) 0.64 SO3249 flgC flagellar basal-body rod protein FlgC (NCBI ptt file) low > 76
Pseudomonas aeruginosa PA14 0.43 IKLFDK_01705 carbon-nitrogen hydrolase 0.50 IKLFDK_04950 flagellar basal-body rod protein FlgC low > 98
Pseudomonas aeruginosa MRSN321 0.43 DY961_RS24100 carbon-nitrogen hydrolase family protein 0.50 DY961_RS07060 flgC;go_component=bacterial-type flagellar basal body rod protein FlgC low > 100
Pseudomonas aeruginosa PUPa3 0.43 DQ20_RS56560 carbon-nitrogen hydrolase family protein 0.50 DQ20_RS45725 flgC;go_component=bacterial-type flagellar basal body rod protein FlgC low > 101
Shewanella loihica PV-4 0.43 Shew_0409 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (RefSeq) 0.70 Shew_1346 flgC flagellar basal body rod protein FlgC (RefSeq) — —
Pseudomonas segetis P6 0.42 MPMX49_03866 Deaminated glutathione amidase 0.51 MPMX49_03166 Flagellar basal-body rod protein FlgC low > 75
Shewanella sp. ANA-3 0.42 Shewana3_3642 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (RefSeq) 0.64 Shewana3_1322 flgC flagellar basal body rod protein FlgC (RefSeq) low > 73
Pseudomonas sp. SVBP6 0.42 COO64_RS04220 carbon-nitrogen hydrolase family protein 0.51 COO64_RS21395 flgC flagellar basal body rod protein FlgC low > 93
Pseudomonas fluorescens GW456-L13 0.42 PfGW456L13_5027 FIG003879: Predicted amidohydrolase / Omega amidase (Nit2 homolog) 0.49 PfGW456L13_2002 Flagellar basal-body rod protein FlgC low > 87
Pseudomonas syringae pv. syringae B728a ΔmexB 0.42 Psyr_4157 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 0.49 Psyr_3480 Flagellar basal-body rod protein FlgC low > 86
Pseudomonas syringae pv. syringae B728a 0.42 Psyr_4157 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 0.49 Psyr_3480 Flagellar basal-body rod protein FlgC 0.38 46
Pseudomonas simiae WCS417 0.42 PS417_04280 carbon-nitrogen hydrolase 0.50 PS417_21565 flagellar basal body rod protein FlgC 0.19 73
Pseudomonas sp. RS175 0.42 PFR28_00160 Deaminated glutathione amidase 0.49 PFR28_03253 Flagellar basal-body rod protein FlgC low > 88
Pseudomonas sp. DMC3 0.42 GFF1815 Deaminated glutathione amidase 0.49 GFF4849 Flagellar basal-body rod protein FlgC low > 89
Pseudomonas fluorescens SBW25-INTG 0.41 PFLU_RS04335 carbon-nitrogen hydrolase family protein 0.50 PFLU_RS23175 flagellar basal body rod protein FlgC low > 109
Pseudomonas fluorescens SBW25 0.41 PFLU_RS04335 carbon-nitrogen hydrolase family protein 0.50 PFLU_RS23175 flagellar basal body rod protein FlgC low > 109
Pseudomonas fluorescens FW300-N2E3 0.41 AO353_05220 carbon-nitrogen hydrolase 0.49 AO353_02855 flagellar basal-body rod protein FlgC low > 101
Pseudomonas stutzeri RCH2 0.41 Psest_3321 Predicted amidohydrolase 0.46 Psest_2967 flagellar basal-body rod protein FlgC low > 67
Pseudomonas fluorescens FW300-N2C3 0.41 AO356_07100 carbon-nitrogen hydrolase 0.49 AO356_18920 flagellar basal-body rod protein FlgC low > 104
Shewanella amazonensis SB2B 0.41 Sama_0473 carbon-nitrogen family hydrolase (RefSeq) 0.67 Sama_2317 flgC flagellar basal body rod protein FlgC (RefSeq) low > 62
Pseudomonas lactucae CFBP13502 0.41 GEMAOFIL_01061 Deaminated glutathione amidase 0.50 GEMAOFIL_04456 Flagellar basal-body rod protein FlgC low > 96
Pseudomonas putida KT2440 0.41 PP_0939 Carbon-nitrogen hydrolase family protein 0.49 PP_4390 flagellar basal-body rod protein FlgC low > 96
Pseudomonas fluorescens FW300-N2E2 0.41 Pf6N2E2_3281 FIG003879: Predicted amidohydrolase / Omega amidase (Nit2 homolog) 0.49 Pf6N2E2_5695 Flagellar basal-body rod protein FlgC low > 103
Pseudomonas fluorescens FW300-N1B4 0.41 Pf1N1B4_1093 FIG003879: Predicted amidohydrolase / Omega amidase (Nit2 homolog) 0.49 Pf1N1B4_3473 Flagellar basal-body rod protein FlgC low > 87
Pseudomonas orientalis W4I3 0.40 QF045_RS07270 carbon-nitrogen hydrolase family protein 0.50 QF045_RS23650 flagellar basal body rod protein FlgC low > 93
Azospirillum brasilense Sp245 0.40 AZOBR_RS02920 amidohydrolase 0.26 AZOBR_RS29935 flagellar basal-body rod protein FlgC low > 97
Pseudomonas sp. BP01 0.40 JOY50_RS11065 carbon-nitrogen hydrolase family protein 0.49 JOY50_RS00790 flgC flagellar basal body rod protein FlgC low > 84
Azospirillum sp. SherDot2 0.40 MPMX19_02429 Deaminated glutathione amidase 0.29 MPMX19_00863 Flagellar basal-body rod protein FlgC low > 112
Phaeobacter inhibens DSM 17395 0.39 PGA1_c34700 putative carbon-nitrogen hydrolase 0.21 PGA1_c35820 flagellar basal-body rod protein FlgC low > 62
Alteromonas macleodii MIT1002 0.38 MIT1002_00226 (R)-stereoselective amidase 0.59 MIT1002_01040 Putative proximal rod protein low > 70
Marinobacter adhaerens HP15 0.38 HP15_2449 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 0.49 HP15_1468 flagellar basal-body rod protein FlgC-like protein low > 73
Paraburkholderia sabiae LMG 24235 0.38 QEN71_RS26550 carbon-nitrogen hydrolase family protein 0.43 QEN71_RS28915 flagellar basal body rod protein FlgC low > 153
Dinoroseobacter shibae DFL-12 0.38 Dshi_3506 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (RefSeq) 0.23 Dshi_3248 flagellar basal-body rod protein FlgC (RefSeq) low > 64
Paraburkholderia graminis OAS925 0.38 ABIE53_000852 putative amidohydrolase 0.40 ABIE53_000101 flagellar basal-body rod protein FlgC low > 113
Burkholderia phytofirmans PsJN 0.38 BPHYT_RS03545 apolipoprotein acyltransferase 0.39 BPHYT_RS18890 flagellar basal body rod protein FlgC low > 109
Paraburkholderia bryophila 376MFSha3.1 0.37 H281DRAFT_04689 nitrilase 0.40 H281DRAFT_05763 flagellar basal-body rod protein FlgC low > 103
Methylophilus sp. DMC18 0.37 GFF381 Deaminated glutathione amidase 0.51 GFF562 Flagellar basal-body rod protein FlgC low > 43
Dechlorosoma suillum PS 0.36 Dsui_3402 putative amidohydrolase 0.45 Dsui_1733 flagellar basal-body rod protein FlgC low > 51
Sphingomonas koreensis DSMZ 15582 0.36 Ga0059261_3603 Predicted amidohydrolase 0.33 Ga0059261_2090 flagellar basal-body rod protein FlgC low > 68
Herbaspirillum seropedicae SmR1 0.36 HSERO_RS07150 apolipoprotein acyltransferase 0.45 HSERO_RS10185 flagellar basal body rod protein FlgC low > 78
Sinorhizobium meliloti 1021 0.36 SMc02442 hydrolase 0.26 SMc03028 flagellar basal body rod protein FlgC low > 103
Cupriavidus basilensis FW507-4G11 0.36 RR42_RS05880 acyltransferase 0.44 RR42_RS35720 flagellar basal body rod protein FlgC low > 128
Rhodopseudomonas palustris CGA009 0.36 TX73_003100 carbon-nitrogen hydrolase family protein 0.22 TX73_020155 flagellar basal body rod protein FlgC low > 86
Ralstonia solanacearum GMI1000 0.36 RS_RS13310 carbon-nitrogen hydrolase family protein 0.38 RS_RS18800 flagellar basal body rod protein FlgC low > 80
Ralstonia solanacearum IBSBF1503 0.35 RALBFv3_RS05450 carbon-nitrogen hydrolase family protein 0.40 RALBFv3_RS21735 flagellar basal body rod protein FlgC low > 76
Ralstonia solanacearum UW163 0.35 UW163_RS08175 carbon-nitrogen hydrolase family protein 0.40 UW163_RS17450 flagellar basal body rod protein FlgC — —
Brevundimonas sp. GW460-12-10-14-LB2 0.35 A4249_RS13565 carbon-nitrogen hydrolase family protein 0.21 A4249_RS16025 flagellar basal body rod protein FlgC low > 48
Ralstonia solanacearum PSI07 0.35 RPSI07_RS11855 carbon-nitrogen hydrolase family protein 0.38 RPSI07_RS01395 flagellar basal body rod protein FlgC low > 81
Variovorax sp. SCN45 0.35 GFF5445 FIG003879: Uncharacterized subgroup of the nitrilase superfamily 0.42 GFF5716 Flagellar basal-body rod protein FlgC low > 127
Caulobacter crescentus NA1000 0.35 CCNA_00871 carbon-nitrogen hydrolase family protein 0.21 CCNA_01005 flagellar basal-body rod protein flgC low > 66
Caulobacter crescentus NA1000 Δfur 0.35 CCNA_00871 carbon-nitrogen hydrolase family protein 0.21 CCNA_01005 flagellar basal-body rod protein flgC low > 67
Ralstonia sp. UNC404CL21Col 0.35 ABZR87_RS01100 carbon-nitrogen hydrolase family protein 0.39 ABZR87_RS22285 flagellar basal body rod protein FlgC low > 80
Rhodospirillum rubrum S1H 0.34 Rru_A0739 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (NCBI) 0.27 Rru_A2825 Flagellar basal-body rod protein FlgC (NCBI) low > 58
Sphingobium sp. HT1-2 0.34 GFF2532 FIG147869: Carbon-nitrogen hydrolase 0.34 GFF3713 Flagellar basal-body rod protein FlgC low > 95
Agrobacterium fabrum C58 0.34 Atu3510 amidohydrolase 0.27 Atu0554 flagellar basal-body rod protein low > 89
Magnetospirillum magneticum AMB-1 0.34 AMB_RS08115 carbon-nitrogen hydrolase family protein 0.27 AMB_RS03170 flagellar basal body rod protein FlgC low > 64
Rhizobium sp. OAE497 0.34 ABIE40_RS17345 carbon-nitrogen hydrolase family protein 0.27 ABIE40_RS02975 flagellar basal body rod protein FlgC low > 107
Xanthobacter sp. DMC5 0.33 GFF102 Deaminated glutathione amidase 0.22 GFF4492 Flagellar basal-body rod protein FlgC — —
Castellaniella sp019104865 MT123 0.33 ABCV34_RS02585 carbon-nitrogen hydrolase family protein 0.42 ABCV34_RS05765 flagellar basal body rod protein FlgC low > 48
Hydrogenophaga sp. GW460-11-11-14-LB1 0.31 GFF2535 FIG003879: Predicted amidohydrolase 0.51 GFF1414 Flagellar basal-body rod protein FlgC low > 90
Acidovorax sp. GW101-3H11 0.29 Ac3H11_1207 FIG003879: Predicted amidohydrolase 0.49 Ac3H11_1376 Flagellar basal-body rod protein FlgC low > 79
Pantoea agglomerans CFBP13505 P0401 0.20 PagCFBP13505_RS03225 deaminated glutathione amidase 0.38 PagCFBP13505_RS05175 flagellar basal body rod protein FlgC low > 74
Dickeya dianthicola 67-19 0.19 HGI48_RS19475 deaminated glutathione amidase 0.42 HGI48_RS13520 flagellar basal body rod protein FlgC low > 71
Erwinia amylovora T8 0.19 OLJFJH_17270 deaminated glutathione amidase 0.44 OLJFJH_10050 flagellar basal body rod protein FlgC low > 58
Pantoea sp. MT58 0.19 IAI47_14065 deaminated glutathione amidase 0.39 IAI47_12160 flagellar basal body rod protein FlgC low > 76
Dickeya dadantii 3937 0.18 DDA3937_RS06130 deaminated glutathione amidase 0.42 DDA3937_RS13475 flagellar basal body rod protein FlgC low > 74
Erwinia tracheiphila SCR3 0.18 LU632_RS16420 deaminated glutathione amidase 0.39 LU632_RS10400 flgC flagellar basal body rod protein FlgC low > 73
Erwinia tracheiphila HP pepo 2.2 0.18 IJEDHG_02515 deaminated glutathione amidase 0.39 IJEDHG_21050 flgC flagellar basal body rod protein FlgC 0.56 51
Dickeya dianthicola ME23 0.18 DZA65_RS06520 deaminated glutathione amidase 0.42 DZA65_RS14005 flagellar basal body rod protein FlgC low > 75
Enterobacter asburiae PDN3 0.18 EX28DRAFT_2337 Predicted amidohydrolase 0.40 EX28DRAFT_1858 flagellar basal-body rod protein FlgC low > 76
Rahnella sp. WP5 0.17 EX31_RS23065 deaminated glutathione amidase 0.41 EX31_RS11310 flagellar basal body rod protein FlgC low > 89
Enterobacter sp. TBS_079 0.17 MPMX20_01285 Deaminated glutathione amidase 0.40 MPMX20_01753 Flagellar basal-body rod protein FlgC low > 85
Pectobacterium carotovorum WPP14 0.17 HER17_RS17575 deaminated glutathione amidase 0.41 HER17_RS08170 flagellar basal body rod protein FlgC low > 75
Xanthomonas campestris pv. campestris strain 8004 0.16 Xcc-8004.2374.1 N-carbamoylputrescine amidase (3.5.1.53) / Aliphatic amidase AmiE (EC 3.5.1.4) 0.41 Xcc-8004.2779.1 Flagellar basal-body rod protein FlgC — —
Rhodanobacter sp000427505 FW510-R12 0.15 LRK53_RS09305 amidohydrolase 0.50 LRK53_RS15170 flagellar basal body rod protein FlgC low > 59
Rhodanobacter denitrificans FW104-10B01 0.14 LRK54_RS00825 amidohydrolase 0.51 LRK54_RS13410 flagellar basal body rod protein FlgC low > 59
Rhodanobacter denitrificans MT42 0.14 LRK55_RS00600 amidohydrolase 0.51 LRK55_RS13150 flagellar basal body rod protein FlgC low > 63
Lysobacter sp. OAE881 0.14 ABIE51_RS09320 carbon-nitrogen hydrolase 0.41 ABIE51_RS16675 flagellar basal body rod protein FlgC — —
Rhodanobacter sp. FW510-T8 0.14 OKGIIK_06395 nit2 amidohydrolase 0.50 OKGIIK_02655 flgC flagellar basal body rod protein FlgC low > 53
Bosea sp. OAE506 0.14 ABIE41_RS12325 N-carbamoyl-D-amino-acid hydrolase 0.27 ABIE41_RS05520 flagellar basal body rod protein FlgC low > 77
Dyella japonica UNC79MFTsu3.2 0.13 ABZR86_RS02765 carbon-nitrogen hydrolase 0.47 ABZR86_RS20080 flagellar basal body rod protein FlgC — —
Desulfovibrio vulgaris Miyazaki F 0.11 DvMF_0653 N-carbamoylputrescine amidase (RefSeq) 0.26 DvMF_2285 flagellar basal-body rod protein FlgC (RefSeq) low > 51

Not shown: 18 genomes with orthologs for CSW01_02215 only; 15 genomes with orthologs for CSW01_11220 only