Conservation of cofitness between CSW01_04945 and CSW01_10415 in Vibrio cholerae E7946 ATCC 55056

88 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_04945 cysteine synthase A 1.0 CSW01_10415 succinate--CoA ligase subunit alpha 0.53 4
Escherichia coli ECOR38 0.79 HEPCGN_21380 cysK cysteine synthase A 0.88 HEPCGN_01320 sucD succinate--CoA ligase subunit alpha low > 88
Pectobacterium carotovorum WPP14 0.79 HER17_RS17170 cysteine synthase A 0.87 HER17_RS14915 succinate--CoA ligase subunit alpha low > 75
Escherichia coli ECRC62 0.79 BNILDI_12745 cysK cysteine synthase A 0.88 BNILDI_21295 sucD succinate--CoA ligase subunit alpha low > 75
Dickeya dadantii 3937 0.79 DDA3937_RS04490 cysteine synthase A 0.87 DDA3937_RS06475 succinate--CoA ligase subunit alpha low > 74
Escherichia coli ECRC99 0.79 KEDOAH_06020 cysK cysteine synthase A 0.88 KEDOAH_21055 sucD succinate--CoA ligase subunit alpha
Escherichia fergusonii Becca 0.79 EFB2_01462 Cysteine synthase A 0.88 EFB2_03377 Succinate--CoA ligase [ADP-forming] subunit alpha low > 86
Escherichia coli Nissle 1917 0.79 ECOLIN_RS13870 cysteine synthase A 0.88 ECOLIN_RS03885 succinate--CoA ligase subunit alpha
Escherichia coli ECRC102 0.79 NIAGMN_19970 cysK cysteine synthase A 0.88 NIAGMN_04960 sucD succinate--CoA ligase subunit alpha low > 80
Escherichia coli BL21 0.79 ECD_02314 cysteine synthase A, O-acetylserine sulfhydrolase A subunit 0.88 ECD_00688 succinyl-CoA synthetase, NAD(P)-binding, alpha subunit low > 61
Escherichia coli BW25113 0.79 b2414 cysK cysteine synthase A, O-acetylserine sulfhydrolase A subunit (NCBI) 0.88 b0729 sucD succinyl-CoA synthetase subunit alpha (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.79 OHPLBJKB_01309 Cysteine synthase A 0.88 OHPLBJKB_02988 Succinate--CoA ligase [ADP-forming] subunit alpha low > 74
Escherichia coli ECOR27 0.79 NOLOHH_13880 cysK cysteine synthase A 0.88 NOLOHH_23300 sucD succinate--CoA ligase subunit alpha low > 76
Escherichia coli ECRC100 0.79 OKFHMN_22200 cysK cysteine synthase A 0.88 OKFHMN_06910 sucD succinate--CoA ligase subunit alpha low > 79
Escherichia coli ECRC98 0.79 JDDGAC_26150 cysK cysteine synthase A 0.87 JDDGAC_10565 sucD succinate--CoA ligase subunit alpha low > 87
Escherichia coli ECRC101 0.79 MCAODC_12730 cysK cysteine synthase A 0.88 MCAODC_26130 sucD succinate--CoA ligase subunit alpha low > 87
Enterobacter sp. TBS_079 0.78 MPMX20_03308 Cysteine synthase A 0.90 MPMX20_01357 Succinate--CoA ligase [ADP-forming] subunit alpha low > 85
Enterobacter asburiae PDN3 0.78 EX28DRAFT_0214 cysteine synthase A 0.90 EX28DRAFT_2263 succinyl-CoA synthetase, alpha subunit low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.78 GFF2044 Cysteine synthase (EC 2.5.1.47) 0.90 GFF4642 Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5) low > 78
Dickeya dianthicola ME23 0.78 DZA65_RS04370 cysteine synthase A 0.86 DZA65_RS06860 succinate--CoA ligase subunit alpha low > 75
Dickeya dianthicola 67-19 0.78 HGI48_RS04450 cysteine synthase A 0.87 HGI48_RS06515 succinate--CoA ligase subunit alpha low > 71
Serratia liquefaciens MT49 0.78 IAI46_18445 cysteine synthase A 0.88 IAI46_06290 succinate--CoA ligase subunit alpha low > 87
Klebsiella michiganensis M5al 0.78 BWI76_RS20640 cysteine synthase A 0.89 BWI76_RS08430 succinate--CoA ligase subunit alpha low > 92
Shewanella oneidensis MR-1 0.78 SO2903 cysK cysteine synthase A (NCBI ptt file) 0.90 SO1933 sucD succinyl-CoA synthase, alpha subunit (NCBI ptt file)
Shewanella sp. ANA-3 0.78 Shewana3_1561 cysteine synthase (RefSeq) 0.90 Shewana3_1713 succinyl-CoA synthetase (ADP-forming) alpha subunit (RefSeq)
Klebsiella pneumoniae MKP103 0.78 KDGMDA_27485 cysteine synthase A 0.90 KDGMDA_16745 succinate--CoA ligase subunit alpha low > 95
Pantoea agglomerans CFBP13505 P0401 0.77 PagCFBP13505_RS19985 cysteine synthase A 0.88 PagCFBP13505_RS03575 succinate--CoA ligase subunit alpha
Pantoea sp. MT58 0.77 IAI47_05440 cysteine synthase A 0.88 IAI47_13730 succinate--CoA ligase subunit alpha
Erwinia tracheiphila HP pepo 2.2 0.77 IJEDHG_17655 cysK cysteine synthase A 0.87 IJEDHG_02130 sucD succinate--CoA ligase subunit alpha
Erwinia tracheiphila SCR3 0.77 LU632_RS06625 cysK cysteine synthase A 0.87 LU632_RS16080 sucD succinate--CoA ligase subunit alpha
Erwinia amylovora T8 0.77 OLJFJH_10865 cysteine synthase A 0.86 OLJFJH_16935 succinate--CoA ligase subunit alpha low > 58
Rahnella sp. WP5 0.76 EX31_RS20175 cysteine synthase A 0.86 EX31_RS23455 succinate--CoA ligase subunit alpha low > 89
Shewanella loihica PV-4 0.75 Shew_2382 cysteine synthase A (RefSeq) 0.91 Shew_1658 succinyl-CoA synthetase, alpha subunit (RefSeq)
Shewanella amazonensis SB2B 0.75 Sama_1508 cysteine synthase A (RefSeq) 0.92 Sama_1430 succinyl-CoA synthetase alpha chain (RefSeq)
Alteromonas macleodii MIT1002 0.73 MIT1002_02237 Cysteine synthase A 0.91 MIT1002_01951 Succinyl-CoA ligase [ADP-forming] subunit alpha
Marinobacter adhaerens HP15 0.72 HP15_3453 cysteine synthase A 0.88 HP15_1525 succinyl-CoA synthetase, alpha subunit
Pseudomonas sp. DMC3 0.71 GFF2334 Cysteine synthase A 0.87 GFF2524 Succinate--CoA ligase [ADP-forming] subunit alpha
Pseudomonas sp. RS175 0.71 PFR28_00734 Cysteine synthase A 0.87 PFR28_03092 Succinate--CoA ligase [ADP-forming] subunit alpha
Pseudomonas fluorescens FW300-N2C3 0.71 AO356_04305 cysteine synthase 0.86 AO356_19715 succinyl-CoA synthetase subunit alpha
Pseudomonas lactucae CFBP13502 0.70 GEMAOFIL_01633 Cysteine synthase A 0.86 GEMAOFIL_01913 Succinate--CoA ligase [ADP-forming] subunit alpha
Pseudomonas fluorescens FW300-N1B4 0.70 Pf1N1B4_3374 Cysteine synthase (EC 2.5.1.47) 0.87 Pf1N1B4_3685 Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5) low > 87
Pseudomonas fluorescens FW300-N2E2 0.70 Pf6N2E2_2700 Cysteine synthase (EC 2.5.1.47) 0.87 Pf6N2E2_5859 Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)
Pseudomonas fluorescens FW300-N2E3 0.70 AO353_18020 cysteine synthase 0.86 AO353_01815 succinyl-CoA synthetase subunit alpha
Pseudomonas fluorescens GW456-L13 0.70 PfGW456L13_4472 Cysteine synthase (EC 2.5.1.47) 0.87 PfGW456L13_4265 Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)
Pseudomonas syringae pv. syringae B728a ΔmexB 0.70 Psyr_1583 cysteine synthase 0.88 Psyr_2013 succinyl-CoA synthetase (ADP-forming) alpha subunit
Pseudomonas syringae pv. syringae B728a 0.70 Psyr_1583 cysteine synthase 0.88 Psyr_2013 succinyl-CoA synthetase (ADP-forming) alpha subunit
Pseudomonas simiae WCS417 0.70 PS417_07505 cysteine synthase 0.86 PS417_08915 succinyl-CoA synthetase subunit alpha
Pseudomonas fluorescens SBW25-INTG 0.70 PFLU_RS07585 cysteine synthase A 0.86 PFLU_RS08975 succinate--CoA ligase subunit alpha
Pseudomonas fluorescens SBW25 0.70 PFLU_RS07585 cysteine synthase A 0.86 PFLU_RS08975 succinate--CoA ligase subunit alpha
Pseudomonas sp. S08-1 0.69 OH686_05215 cysteine synthase A 0.90 OH686_01950 Succinyl-CoA ligase [ADP-forming] alpha chain
Pseudomonas orientalis W4I3 0.69 QF045_RS10150 cysteine synthase A 0.86 QF045_RS11610 succinate--CoA ligase subunit alpha
Pseudomonas putida KT2440 0.69 PP_4571 cysteine synthase A 0.88 PP_4185 succinyl-CoA synthetase alpha subunit
Pseudomonas sp. BP01 0.69 JOY50_RS01420 cysK cysteine synthase A 0.88 JOY50_RS19095 sucD succinate--CoA ligase subunit alpha
Pseudomonas sp. SVBP6 0.69 COO64_RS22165 cysK cysteine synthase A 0.89 COO64_RS18915 sucD succinate--CoA ligase subunit alpha
Pseudomonas aeruginosa MRSN321 0.68 DY961_RS03660 cysK;go_function=cysteine cysteine synthase A 0.90 DY961_RS19595 sucD;go_function=catalytic succinate--CoA ligase subunit alpha
Pseudomonas aeruginosa PUPa3 0.68 DQ20_RS34700 cysK;go_function=cysteine cysteine synthase A 0.90 DQ20_RS53710 sucD;go_function=catalytic succinate--CoA ligase subunit alpha
Pseudomonas aeruginosa PA14 0.68 IKLFDK_13610 cysteine synthase A 0.90 IKLFDK_07610 succinate--CoA ligase subunit alpha
Pseudomonas segetis P6 0.67 MPMX49_02972 Cysteine synthase A 0.88 MPMX49_02349 Succinate--CoA ligase [ADP-forming] subunit alpha
Pseudomonas stutzeri RCH2 0.65 Psest_1855 cysteine synthase A 0.88 Psest_2490 succinyl-CoA synthetase, alpha subunit low > 67
Methylophilus sp. DMC18 0.63 GFF399 Cysteine synthase 0.72 GFF786 Succinate--CoA ligase [ADP-forming] subunit alpha
Dechlorosoma suillum PS 0.61 Dsui_2521 cysteine synthase A 0.55 Dsui_1446 succinyl-CoA synthetase, alpha subunit low > 51
Acinetobacter baumannii LAC-4 0.59 RR41_RS18015 cysteine synthase A 0.73 RR41_RS04065 succinate--CoA ligase subunit alpha low > 55
Bacteroides thetaiotaomicron VPI-5482 0.51 BT3080 cysteine synthase A (NCBI ptt file) 0.59 BT0787 succinyl-CoA synthetase alpha chain (NCBI ptt file) low > 81
Rhodospirillum rubrum S1H 0.48 Rru_A3794 Cysteine synthase (NCBI) 0.67 Rru_A1212 Succinyl-CoA ligase, alpha subunit (NCBI)
Brevundimonas sp. GW460-12-10-14-LB2 0.48 A4249_RS10255 cysteine synthase A 0.53 A4249_RS14425 succinate--CoA ligase subunit alpha
Mycobacterium tuberculosis H37Rv 0.47 Rv2334 Cysteine synthase a CysK1 (O-acetylserine sulfhydrylase A) (O-acetylserine (thiol)-lyase A) (CSASE A) 0.49 Rv0952 Probable succinyl-CoA synthetase (alpha chain) SucD (SCS-alpha)
Bacteroides ovatus ATCC 8483 0.46 BACOVA_02771 cysteine synthase A 0.59 BACOVA_02526 succinate-CoA ligase, alpha subunit low > 96
Azospirillum brasilense Sp245 0.46 AZOBR_RS01080 cysteine synthase 0.65 AZOBR_RS14070 succinyl-CoA synthetase subsunit alpha
Synechocystis sp000284455 PCC 6803 0.45 SGL_RS06370 cysteine synthase A 0.25 SGL_RS11225 CoA-binding protein low > 52
Rhodopseudomonas palustris CGA009 0.45 TX73_002885 cysteine synthase A 0.66 TX73_000985 succinate--CoA ligase subunit alpha
Sinorhizobium meliloti 1021 0.45 SMc00421 O-acetylserine sulfhydrylase A 0.60 SMc02481 succinyl-CoA synthetase subunit alpha
Rhizobium sp. OAE497 0.44 ABIE40_RS01415 cysteine synthase A 0.62 ABIE40_RS17990 succinate--CoA ligase subunit alpha
Azospirillum sp. SherDot2 0.43 MPMX19_00237 Cysteine synthase 0.65 MPMX19_00105 Succinate--CoA ligase [ADP-forming] subunit alpha
Agrobacterium fabrum C58 0.43 Atu0312 cysteine synthase 0.59 Atu2637 succinyl-CoA synthetase alpha chain
Xanthobacter sp. DMC5 0.43 GFF4579 O-acetylserine sulfhydrylase 0.65 GFF4409 Succinate--CoA ligase [ADP-forming] subunit alpha
Bosea sp. OAE506 0.42 ABIE41_RS03545 cysteine synthase A 0.66 ABIE41_RS08970 succinate--CoA ligase subunit alpha
Hydrogenophaga sp. GW460-11-11-14-LB1 0.42 GFF4578 Cysteine synthase (EC 2.5.1.47) 0.55 GFF2505 Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)
Variovorax sp. SCN45 0.42 GFF4549 Cysteine synthase (EC 2.5.1.47) 0.55 GFF5406 Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)
Caulobacter crescentus NA1000 Δfur 0.42 CCNA_03740 cysteine synthase 0.66 CCNA_00341 succinyl-CoA synthetase alpha chain
Caulobacter crescentus NA1000 0.42 CCNA_03740 cysteine synthase 0.66 CCNA_00341 succinyl-CoA synthetase alpha chain
Magnetospirillum magneticum AMB-1 0.41 AMB_RS01005 cysteine synthase A 0.68 AMB_RS20035 succinate--CoA ligase subunit alpha
Variovorax sp. OAS795 0.41 ABID97_RS06080 cysteine synthase A 0.58 ABID97_RS24470 succinate--CoA ligase subunit alpha low > 91
Sphingobium sp. HT1-2 0.40 GFF2905 Cysteine synthase (EC 2.5.1.47) 0.67 GFF2449 Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)
Pontibacter actiniarum KMM 6156, DSM 19842 0.39 CA264_13470 cysteine synthase A 0.50 CA264_13760 succinate--CoA ligase subunit alpha
Sphingomonas koreensis DSMZ 15582 0.39 Ga0059261_3644 cysteine synthase A 0.66 Ga0059261_1340 succinyl-CoA synthetase, alpha subunit
Acidovorax sp. GW101-3H11 0.38 Ac3H11_1975 Cysteine synthase (EC 2.5.1.47) 0.55 Ac3H11_1251 Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)
Cupriavidus basilensis FW507-4G11 0.38 RR42_RS21960 cysteine synthase 0.66 RR42_RS31380 succinate--CoA ligase low > 128
Dinoroseobacter shibae DFL-12 0.29 Dshi_0891 cysteine synthase A (RefSeq) 0.69 Dshi_2882 succinyl-CoA synthetase, alpha subunit (RefSeq)
Bifidobacterium breve UCC2003 0.29 BBR_RS13140 cysteine synthase 0.46 BBR_RS15680 succinate--CoA ligase subunit alpha low > 34

Not shown: 7 genomes with orthologs for CSW01_04945 only; 27 genomes with orthologs for CSW01_10415 only