Conservation of cofitness between CSW01_01030 and CSW01_10360 in Vibrio cholerae E7946 ATCC 55056

22 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_01030 AraC family transcriptional regulator 1.0 CSW01_10360 peptidase M16 0.59 12
Shewanella oneidensis MR-1 0.31 SO0766 transcriptional regulator, AraC/XylS family (NCBI ptt file) 0.45 SO3083 peptidase, M16 family (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.31 Shewana3_3537 AraC family transcriptional regulator (RefSeq) 0.45 Shewana3_1465 peptidase M16 domain-containing protein (RefSeq) low > 73
Pseudomonas aeruginosa PA14 0.30 IKLFDK_07760 AraC family transcriptional regulator 0.06 IKLFDK_09635 pyrroloquinoline quinone biosynthesis protein PqqF low > 100
Shewanella loihica PV-4 0.29 Shew_1463 AraC family transcriptional regulator (RefSeq) 0.46 Shew_2420 peptidase M16 domain-containing protein (RefSeq) low > 60
Shewanella amazonensis SB2B 0.26 Sama_1551 AraC/XylS family transcriptional regulator (RefSeq) 0.45 Sama_2163 M16 family peptidase (RefSeq) low > 62
Pseudomonas fluorescens FW300-N2C3 0.20 AO356_24435 AraC family transcriptional regulator 0.08 AO356_14220 pyrroloquinoline quinone biosynthesis protein PqqF low > 104
Erwinia tracheiphila SCR3 0.13 LU632_RS11690 rhaS HTH-type transcriptional activator RhaS 0.18 LU632_RS06185 ptrA pitrilysin low > 74
Escherichia coli ECOR27 0.13 NOLOHH_06020 rhaS HTH-type transcriptional activator RhaS 0.17 NOLOHH_11930 ptrA pitrilysin low > 76
Erwinia tracheiphila HP pepo 2.2 0.13 IJEDHG_22880 rhaS HTH-type transcriptional activator RhaS 0.18 IJEDHG_17200 ptrA pitrilysin — —
Escherichia coli BW25113 0.13 b3905 rhaS DNA-binding transcriptional activator, L-rhamnose-binding (NCBI) 0.17 b2821 ptr protease III (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.13 OHPLBJKB_04145 HTH-type transcriptional activator RhaS 0.17 OHPLBJKB_00909 Protease 3 low > 74
Escherichia coli ECRC62 0.13 BNILDI_05505 rhaS HTH-type transcriptional activator RhaS 0.17 BNILDI_10410 ptrA pitrilysin low > 75
Escherichia coli ECRC99 0.13 KEDOAH_14265 rhaS HTH-type transcriptional activator RhaS 0.17 KEDOAH_08085 ptrA pitrilysin — —
Escherichia coli ECRC101 0.13 MCAODC_04390 rhaS HTH-type transcriptional activator RhaS 0.17 MCAODC_10570 ptrA pitrilysin low > 88
Escherichia coli ECRC102 0.13 NIAGMN_11645 rhaS HTH-type transcriptional activator RhaS 0.17 NIAGMN_17815 ptrA pitrilysin low > 80
Escherichia coli ECRC100 0.13 OKFHMN_13890 rhaS HTH-type transcriptional activator RhaS 0.17 OKFHMN_20045 ptrA pitrilysin low > 79
Escherichia coli ECRC98 0.13 JDDGAC_17515 rhaS HTH-type transcriptional activator RhaS 0.17 JDDGAC_23710 ptrA pitrilysin low > 87
Escherichia coli BL21 0.13 ECD_03791 transcriptional activator of rhaBAD and rhaT 0.17 ECD_02669 protease III low > 61
Escherichia fergusonii Becca 0.13 EFB2_04712 HTH-type transcriptional activator RhaS 0.17 EFB2_01063 Protease 3 low > 86
Escherichia coli Nissle 1917 0.12 ECOLIN_RS22500 HTH-type transcriptional activator RhaS 0.17 ECOLIN_RS15835 pitrilysin low > 55
Escherichia coli ECOR38 0.12 HEPCGN_12530 rhaS HTH-type transcriptional activator RhaS 0.17 HEPCGN_19300 ptrA pitrilysin low > 88
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.11 GFF2266 L-rhamnose operon regulatory protein RhaS 0.18 GFF1302 Protease III precursor (EC 3.4.24.55) low > 78

Not shown: 12 genomes with orthologs for CSW01_01030 only; 15 genomes with orthologs for CSW01_10360 only