Conservation of cofitness between CSW01_14665 and CSW01_10280 in Vibrio cholerae E7946 ATCC 55056

67 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_14665 ribokinase 1.0 CSW01_10280 heme exporter protein C 0.79 15
Serratia liquefaciens MT49 0.53 IAI46_25055 ribokinase 0.61 IAI46_18100 heme ABC transporter permease low > 87
Escherichia fergusonii Becca 0.52 EFB2_04881 Ribokinase 0.63 EFB2_01657 Heme exporter protein C low > 86
Escherichia coli BL21 0.52 ECD_03638 ribokinase 0.63 ECD_02126 heme export ABC transporter permease; CcmE-interacting protein low > 61
Escherichia coli Nissle 1917 0.52 ECOLIN_RS21570 ribokinase 0.63 ECOLIN_RS12850 heme exporter protein CcmC low > 55
Escherichia coli ECRC99 0.52 KEDOAH_13420 rbsK ribokinase 0.63 KEDOAH_04895 ccmC heme exporter protein CcmC — —
Escherichia coli ECRC102 0.52 NIAGMN_12485 rbsK ribokinase 0.63 NIAGMN_21055 ccmC heme exporter protein CcmC low > 80
Escherichia coli ECRC101 0.52 MCAODC_05235 rbsK ribokinase 0.63 MCAODC_14340 ccmC heme exporter protein CcmC low > 87
Escherichia coli ECRC100 0.52 OKFHMN_14730 rbsK ribokinase 0.63 OKFHMN_23290 ccmC heme exporter protein CcmC low > 79
Escherichia coli ECOR27 0.52 NOLOHH_06865 rbsK ribokinase 0.63 NOLOHH_14865 ccmC heme exporter protein CcmC low > 76
Escherichia coli BW25113 0.52 b3752 rbsK ribokinase (NCBI) 0.63 b2199 ccmC heme exporter subunit (NCBI) 0.34 49
Escherichia coli ECRC98 0.52 JDDGAC_18350 rbsK ribokinase 0.63 JDDGAC_27250 ccmC heme exporter protein CcmC low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.52 OHPLBJKB_04301 Ribokinase 0.63 OHPLBJKB_01512 Heme exporter protein C low > 74
Escherichia coli ECRC62 0.52 BNILDI_04660 rbsK ribokinase 0.63 BNILDI_13785 ccmC heme exporter protein CcmC low > 75
Escherichia coli ECOR38 0.52 HEPCGN_13440 rbsK ribokinase 0.63 HEPCGN_22555 ccmC heme exporter protein CcmC low > 88
Pantoea sp. MT58 0.52 IAI47_00370 ribokinase 0.64 IAI47_06075 heme ABC transporter permease low > 76
Pectobacterium carotovorum WPP14 0.52 HER17_RS21530 ribokinase 0.59 HER17_RS09040 heme ABC transporter permease low > 75
Rahnella sp. WP5 0.52 EX31_RS06190 ribokinase 0.66 EX31_RS19760 heme ABC transporter permease low > 89
Pantoea agglomerans CFBP13505 P0401 0.51 PagCFBP13505_RS18965 ribokinase 0.64 PagCFBP13505_RS00030 heme ABC transporter permease low > 74
Erwinia amylovora T8 0.51 OLJFJH_05410 ribokinase 0.64 OLJFJH_11085 heme ABC transporter permease low > 58
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.51 GFF1705 Ribokinase (EC 2.7.1.15) 0.64 GFF4880 Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE — —
Klebsiella pneumoniae MKP103 0.50 KDGMDA_08895 ribokinase 0.59 KDGMDA_23860 heme ABC transporter permease low > 95
Shewanella sp. ANA-3 0.43 Shewana3_3477 ribokinase (RefSeq) 0.67 Shewana3_0229 heme exporter protein CcmC (RefSeq) — —
Shewanella loihica PV-4 0.42 Shew_0696 ribokinase (RefSeq) 0.64 Shew_0188 heme exporter protein CcmC (RefSeq) — —
Shewanella oneidensis MR-1 0.41 SO0810 rbsK ribokinase (NCBI ptt file) 0.66 SO0261 ccmC heme exporter protein CcmC (NCBI ptt file) low > 76
Pseudomonas aeruginosa MRSN321 0.39 DY961_RS28765 rbsK;go_function=ribokinase ribokinase 0.55 DY961_RS05525 heme ABC transporter permease — —
Pseudomonas aeruginosa PA14 0.39 IKLFDK_09520 ribokinase 0.55 IKLFDK_07025 Heme exporter protein C — —
Pseudomonas aeruginosa PUPa3 0.39 DQ20_RS38250 rbsK;go_function=ribokinase ribokinase 0.55 DQ20_RS47265 heme ABC transporter permease — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.37 Psyr_2155 Carbohydrate kinase, PfkB 0.54 Psyr_3391 Cytochrome c-type biogenesis protein CcmC — —
Pseudomonas syringae pv. syringae B728a 0.37 Psyr_2155 Carbohydrate kinase, PfkB 0.54 Psyr_3391 Cytochrome c-type biogenesis protein CcmC — —
Pseudomonas simiae WCS417 0.36 PS417_18385 ribokinase 0.55 PS417_08700 heme ABC transporter permease — —
Dyella japonica UNC79MFTsu3.2 0.35 ABZR86_RS15070 ribokinase 0.52 ABZR86_RS06430 heme ABC transporter permease — —
Pseudomonas sp. DMC3 0.35 GFF901 Ribokinase 0.56 GFF2487 Heme exporter protein C — —
Pseudomonas fluorescens FW300-N2E2 0.35 Pf6N2E2_165 Ribokinase (EC 2.7.1.15) 0.55 Pf6N2E2_2558 Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE — —
Pseudomonas fluorescens GW456-L13 0.35 PfGW456L13_3908 Ribokinase (EC 2.7.1.15) 0.55 PfGW456L13_4314 Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE — —
Pseudomonas fluorescens FW300-N2C3 0.35 AO356_00950 Ribokinase (EC 2.7.1.15) (from data) 0.55 AO356_03650 heme ABC transporter permease — —
Pseudomonas fluorescens FW300-N1B4 0.35 Pf1N1B4_6031 Ribokinase (EC 2.7.1.15) (from data) 0.55 Pf1N1B4_3641 Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE — —
Pseudomonas sp. RS175 0.34 PFR28_02733 Ribokinase 0.54 PFR28_00867 Heme exporter protein C — —
Pseudomonas lactucae CFBP13502 0.34 GEMAOFIL_03907 Ribokinase 0.55 GEMAOFIL_01872 Heme exporter protein C — —
Pseudomonas putida KT2440 0.34 PP_2458 ribokinase 0.53 PP_4325 protoheme IX reservoir complex subunit — —
Pseudomonas orientalis W4I3 0.34 QF045_RS20535 ribokinase 0.54 QF045_RS11415 heme ABC transporter permease low > 93
Pseudomonas sp. SVBP6 0.34 COO64_RS10345 rbsK ribokinase 0.57 COO64_RS25700 heme ABC transporter permease — —
Pseudomonas sp. BP01 0.33 JOY50_RS04290 rbsK ribokinase 0.52 JOY50_RS00495 heme ABC transporter permease — —
Pseudomonas fluorescens SBW25-INTG 0.33 PFLU_RS20360 ribokinase 0.54 PFLU_RS08655 heme ABC transporter permease 0.26 32
Pseudomonas fluorescens SBW25 0.33 PFLU_RS20360 ribokinase 0.54 PFLU_RS08655 heme ABC transporter permease low > 109
Pseudomonas fluorescens FW300-N2E3 0.32 AO353_20835 Ribokinase (EC 2.7.1.15) (from data) 0.55 AO353_18860 heme ABC transporter permease — —
Rhodospirillum rubrum S1H 0.32 Rru_A2297 Ribokinase (NCBI) 0.43 Rru_A0038 Cytochrome c-type biogenesis protein CcmC (NCBI) — —
Rhodanobacter denitrificans MT42 0.32 LRK55_RS08275 ribokinase 0.49 LRK55_RS15830 heme ABC transporter permease — —
Rhodanobacter denitrificans FW104-10B01 0.32 LRK54_RS08510 ribokinase 0.49 LRK54_RS16080 heme ABC transporter permease — —
Azospirillum sp. SherDot2 0.31 MPMX19_02769 Ribokinase 0.47 MPMX19_02530 Heme exporter protein C — —
Rhodanobacter sp. FW510-T8 0.30 OKGIIK_15305 rbsK ribokinase 0.50 OKGIIK_08570 ccmC heme ABC transporter permease — —
Dinoroseobacter shibae DFL-12 0.30 Dshi_1976 PfkB domain protein (RefSeq) 0.34 Dshi_1853 heme exporter protein CcmC (RefSeq) — —
Alteromonas macleodii MIT1002 0.30 MIT1002_02988 Ribokinase 0.73 MIT1002_00962 Cytochrome c-type biogenesis protein CcmC — —
Rhodanobacter sp000427505 FW510-R12 0.29 LRK53_RS02295 ribokinase 0.50 LRK53_RS12715 heme ABC transporter permease — —
Agrobacterium fabrum C58 0.27 Atu4847 ribokinase 0.44 Atu2688 ABC transporter, membrane spanning protein (heme) — —
Sinorhizobium meliloti 1021 0.26 SMc01103 Ribokinase (EC 2.7.1.15) (from data) 0.45 SMc03849 heme exporter C (cytochrome C-type biogenesis protein) transmembrane low > 103
Lysobacter sp. OAE881 0.25 ABIE51_RS16435 ribokinase 0.44 ABIE51_RS08715 heme ABC transporter permease CcmC low > 62
Rhizobium sp. OAE497 0.23 ABIE40_RS01880 ribokinase 0.42 ABIE40_RS18290 heme ABC transporter permease low > 107
Xanthomonas campestris pv. campestris strain 8004 0.23 Xcc-8004.4302.1 Ribokinase (EC 2.7.1.15) 0.48 Xcc-8004.2345.1 Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE — —
Brevundimonas sp. GW460-12-10-14-LB2 0.23 A4249_RS15765 ribokinase 0.36 A4249_RS12785 heme ABC transporter permease — —
Caulobacter crescentus NA1000 Δfur 0.23 CCNA_01001 ribokinase 0.40 CCNA_03786 heme chaperone heme-lyase low > 67
Caulobacter crescentus NA1000 0.23 CCNA_01001 ribokinase 0.40 CCNA_03786 heme chaperone heme-lyase low > 66
Sphingomonas koreensis DSMZ 15582 0.23 Ga0059261_0568 Sugar kinases, ribokinase family 0.36 Ga0059261_0175 heme exporter protein CcmC — —
Bosea sp. OAE506 0.22 ABIE41_RS03745 ribokinase 0.42 ABIE41_RS04985 heme ABC transporter permease — —
Phaeobacter inhibens DSM 17395 0.17 PGA1_c34980 putative pfkB family carbohydrate kinase 0.34 PGA1_c18870 heme exporter protein C — —
Kangiella aquimarina DSM 16071 0.12 B158DRAFT_1294 Sugar kinases, ribokinase family 0.45 B158DRAFT_1325 heme exporter protein CcmC low > 40
Rhodopseudomonas palustris CGA009 0.12 TX73_003165 sugar kinase 0.40 TX73_001060 heme ABC transporter permease — —
Magnetospirillum magneticum AMB-1 0.09 AMB_RS16380 carbohydrate kinase family protein 0.45 AMB_RS21235 heme transporter HemC — —

Not shown: 28 genomes with orthologs for CSW01_14665 only; 10 genomes with orthologs for CSW01_10280 only