Conservation of cofitness between CSW01_18795 and CSW01_10125 in Vibrio cholerae E7946 ATCC 55056

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_18795 cold-shock protein CspV 1.0 CSW01_10125 maf-like protein 0.47 12
Klebsiella michiganensis M5al 0.73 BWI76_RS10395 cold-shock protein 0.50 BWI76_RS11060 septum formation inhibitor Maf low > 92
Enterobacter sp. TBS_079 0.73 MPMX20_00176 Cold shock protein CspA 0.54 MPMX20_01767 7-methyl-GTP pyrophosphatase low > 85
Dickeya dadantii 3937 0.72 DDA3937_RS19755 cold-shock protein 0.49 DDA3937_RS13150 septum formation inhibitor Maf low > 74
Enterobacter asburiae PDN3 0.72 EX28DRAFT_3819 Cold shock proteins 0.52 EX28DRAFT_1843 MAF protein — —
Alteromonas macleodii MIT1002 0.72 MIT1002_01248 Cold shock-like protein CspG 0.41 MIT1002_01727 Maf-like protein YceF low > 70
Dickeya dianthicola ME23 0.71 DZA65_RS20940 cold-shock protein 0.50 DZA65_RS13685 septum formation inhibitor Maf low > 75
Dickeya dianthicola 67-19 0.71 HGI48_RS19865 cold-shock protein 0.50 HGI48_RS13215 septum formation inhibitor Maf — —
Pectobacterium carotovorum WPP14 0.70 HER17_RS11745 RNA chaperone/antiterminator CspA 0.56 HER17_RS08620 Maf-like protein — —
Escherichia coli BL21 0.70 ECD_03406 RNA chaperone and antiterminator, cold-inducible 0.54 ECD_01083 m(7)GTP pyrophosphatase — —
Escherichia coli ECRC98 0.70 JDDGAC_19635 cspA Major cold shock protein 0.54 JDDGAC_07270 yceF 7-methyl-GTP pyrophosphatase low > 87
Escherichia coli Nissle 1917 0.70 ECOLIN_RS20345 RNA chaperone/antiterminator CspA 0.54 ECOLIN_RS06285 7-methyl-GTP pyrophosphatase low > 55
Escherichia coli ECOR38 0.70 HEPCGN_14895 cspA Major cold shock protein 0.55 HEPCGN_23870 yceF 7-methyl-GTP pyrophosphatase low > 88
Escherichia coli ECRC102 0.70 NIAGMN_13765 cspA Major cold shock protein 0.54 NIAGMN_24220 yceF 7-methyl-GTP pyrophosphatase low > 80
Escherichia coli ECRC99 0.70 KEDOAH_12145 cspA Major cold shock protein 0.54 KEDOAH_24145 yceF 7-methyl-GTP pyrophosphatase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.70 GFF454 Cold shock protein CspA 0.58 GFF3369 FIG146278: Maf/YceF/YhdE family protein low > 78
Escherichia coli ECRC100 0.70 OKFHMN_16005 cspA Major cold shock protein 0.54 OKFHMN_03610 yceF 7-methyl-GTP pyrophosphatase — —
Klebsiella pneumoniae MKP103 0.70 KDGMDA_16340 transcription antiterminator/RNA stability regulator CspE 0.53 KDGMDA_18665 septum formation inhibitor Maf low > 95
Escherichia coli ECRC62 0.70 BNILDI_03595 cspA Major cold shock protein 0.55 BNILDI_19300 yceF 7-methyl-GTP pyrophosphatase low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.70 OHPLBJKB_00150 Cold shock protein CspA 0.55 OHPLBJKB_02579 Maf-like protein YceF low > 74
Escherichia coli BW25113 0.70 b3556 cspA major cold shock protein (NCBI) 0.54 b1087 yceF orf, hypothetical protein (VIMSS) — —
Escherichia coli ECRC101 0.70 MCAODC_06520 cspA Major cold shock protein 0.54 MCAODC_22970 yceF 7-methyl-GTP pyrophosphatase low > 87
Escherichia coli ECOR27 0.70 NOLOHH_07950 cspA Major cold shock protein 0.55 NOLOHH_21140 yceF 7-methyl-GTP pyrophosphatase low > 76
Escherichia fergusonii Becca 0.70 EFB2_00251 Cold shock protein CspA 0.55 EFB2_02888 7-methyl-GTP pyrophosphatase low > 86
Erwinia tracheiphila SCR3 0.70 LU632_RS16440 cspE transcription antiterminator/RNA stability regulator CspE 0.51 LU632_RS14850 Maf-like protein — —
Erwinia amylovora T8 0.70 OLJFJH_17275 transcription antiterminator/RNA stability regulator CspE 0.54 OLJFJH_15560 septum formation inhibitor Maf — —
Pantoea agglomerans CFBP13505 P0401 0.70 PagCFBP13505_RS20805 RNA chaperone/antiterminator CspA 0.54 PagCFBP13505_RS05235 septum formation inhibitor Maf low > 74
Rahnella sp. WP5 0.69 EX31_RS23030 transcription antiterminator/RNA stability regulator CspE 0.45 EX31_RS24405 septum formation inhibitor Maf low > 89
Pantoea sp. MT58 0.69 IAI47_14075 transcription antiterminator/RNA stability regulator CspE 0.55 IAI47_12100 septum formation inhibitor Maf low > 76
Pseudomonas lactucae CFBP13502 0.68 GEMAOFIL_04142 putative cold shock protein A 0.49 GEMAOFIL_04437 7-methyl-GTP pyrophosphatase — —
Dechlorosoma suillum PS 0.67 Dsui_2659 cold shock protein 0.47 Dsui_2442 MAF protein low > 51
Methylophilus sp. DMC18 0.66 GFF958 Cold shock protein CspV 0.45 GFF1259 7-methyl-GTP pyrophosphatase low > 43
Paraburkholderia sabiae LMG 24235 0.65 QEN71_RS39145 cold-shock protein 0.39 QEN71_RS04525 Maf-like protein — —
Cupriavidus basilensis FW507-4G11 0.64 RR42_RS20855 cold-shock protein 0.39 RR42_RS14130 septum formation inhibitor Maf low > 128
Pseudomonas syringae pv. syringae B728a 0.63 Psyr_2160 cold-shock DNA-binding protein family 0.43 Psyr_1642 Maf-like protein low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.63 Psyr_2160 cold-shock DNA-binding protein family 0.43 Psyr_1642 Maf-like protein — —
Pseudomonas stutzeri RCH2 0.62 Psest_3977 Cold shock proteins 0.51 Psest_1683 MAF protein low > 67

Not shown: 7 genomes with orthologs for CSW01_18795 only; 56 genomes with orthologs for CSW01_10125 only