Conservation of cofitness between CSW01_00560 and CSW01_09750 in Vibrio cholerae E7946 ATCC 55056

48 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_00560 DNA polymerase I 1.0 CSW01_09750 molybdopterin guanine dinucleotide-containing S/N-oxide reductase 0.88 9
Serratia liquefaciens MT49 0.66 IAI46_24985 DNA polymerase I 0.48 IAI46_17255 trimethylamine-N-oxide reductase TorA low > 86
Rahnella sp. WP5 0.65 EX31_RS15905 DNA polymerase I 0.30 EX31_RS13235 molybdopterin-dependent oxidoreductase low > 89
Pectobacterium carotovorum WPP14 0.65 HER17_RS21470 DNA polymerase I 0.27 HER17_RS16440 molybdopterin-dependent oxidoreductase — —
Pantoea sp. MT58 0.65 IAI47_00430 DNA polymerase I 0.30 IAI47_16910 molybdopterin guanine dinucleotide-containing S/N-oxide reductase low > 76
Erwinia amylovora T8 0.64 OLJFJH_05470 DNA polymerase I 0.30 OLJFJH_08890 Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit C low > 58
Pantoea agglomerans CFBP13505 P0401 0.64 PagCFBP13505_RS18920 DNA polymerase I 0.31 PagCFBP13505_RS09005 Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit C low > 74
Escherichia coli ECOR38 0.64 HEPCGN_12785 polA DNA polymerase I 0.70 HEPCGN_04625 torZ trimethylamine N-oxide reductase TorZ — —
Enterobacter asburiae PDN3 0.64 EX28DRAFT_4343 DNA polymerase I (EC 2.7.7.7) 0.61 EX28DRAFT_3811 molybdopterin guanine dinucleotide-containing S/N-oxide reductases — —
Escherichia fergusonii Becca 0.64 EFB2_04753 DNA polymerase I 0.70 EFB2_02070 Trimethylamine-N-oxide reductase 2 — —
Escherichia coli ECRC100 0.64 OKFHMN_14150 polA DNA polymerase I 0.70 OKFHMN_26210 torZ trimethylamine N-oxide reductase TorZ — —
Escherichia coli ECRC102 0.64 NIAGMN_11905 polA DNA polymerase I 0.70 NIAGMN_01850 torZ trimethylamine N-oxide reductase TorZ — —
Escherichia coli BL21 0.64 ECD_03749 5 0.70 ECD_01843 trimethylamine N-oxide reductase system III, catalytic subunit — —
Escherichia coli ECOR27 0.64 NOLOHH_06280 polA DNA polymerase I 0.70 NOLOHH_16655 torZ trimethylamine N-oxide reductase TorZ — —
Escherichia coli BW25113 0.64 b3863 polA DNA polymerase I (NCBI) 0.70 b1872 bisZ biotin sulfoxide reductase 2 (VIMSS) low > 76
Escherichia coli ECRC101 0.64 MCAODC_04650 polA DNA polymerase I 0.70 MCAODC_19195 torZ trimethylamine N-oxide reductase TorZ low > 88
Escherichia coli ECRC98 0.64 JDDGAC_17775 polA DNA polymerase I 0.70 JDDGAC_00785 torZ trimethylamine N-oxide reductase TorZ — —
Escherichia coli Nissle 1917 0.64 ECOLIN_RS22270 DNA polymerase I 0.70 ECOLIN_RS10705 trimethylamine N-oxide reductase TorZ — —
Escherichia coli ECRC99 0.64 KEDOAH_14000 polA DNA polymerase I 0.70 KEDOAH_01895 torZ trimethylamine N-oxide reductase TorZ — —
Escherichia coli ECRC62 0.64 BNILDI_05250 polA DNA polymerase I 0.70 BNILDI_15445 torZ trimethylamine N-oxide reductase TorZ — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.64 OHPLBJKB_04189 DNA polymerase I 0.70 OHPLBJKB_01856 Trimethylamine-N-oxide reductase 2 — —
Enterobacter sp. TBS_079 0.64 MPMX20_04601 DNA polymerase I 0.62 MPMX20_00183 Biotin sulfoxide reductase low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.63 GFF2216 DNA polymerase I (EC 2.7.7.7) 0.62 GFF461 Anaerobic dimethyl sulfoxide reductase chain A (EC 1.8.5.3) low > 78
Klebsiella michiganensis M5al 0.63 BWI76_RS00355 DNA polymerase I 0.62 BWI76_RS26930 biotin sulfoxide reductase low > 92
Klebsiella pneumoniae MKP103 0.63 KDGMDA_08970 DNA polymerase I 0.62 KDGMDA_07660 trimethylamine-N-oxide reductase TorA — —
Dickeya dianthicola 67-19 0.63 HGI48_RS21260 DNA polymerase I 0.28 HGI48_RS04640 molybdopterin-dependent oxidoreductase — —
Dickeya dianthicola ME23 0.62 DZA65_RS22235 DNA polymerase I 0.27 DZA65_RS04560 molybdopterin-dependent oxidoreductase — —
Pseudomonas sp. S08-1 0.57 OH686_12215 DNA polymerase I 0.06 OH686_20410 Formate dehydrogenase-O, major subunit low > 80
Pseudomonas syringae pv. syringae B728a ΔmexB 0.55 Psyr_0270 DNA polymerase I 0.31 Psyr_3605 Trimethylamine-N-oxide reductase (cytochrome c) low > 86
Pseudomonas syringae pv. syringae B728a 0.55 Psyr_0270 DNA polymerase I 0.31 Psyr_3605 Trimethylamine-N-oxide reductase (cytochrome c) low > 86
Herbaspirillum seropedicae SmR1 0.53 HSERO_RS02260 DNA polymerase I 0.09 HSERO_RS19290 molybdopterin oxidoreductase low > 78
Paraburkholderia sabiae LMG 24235 0.52 QEN71_RS17885 DNA polymerase I 0.09 QEN71_RS27460 molybdopterin oxidoreductase family protein — —
Methylophilus sp. DMC18 0.52 GFF1658 DNA polymerase I 0.08 GFF2678 Dimethyl sulfoxide reductase DmsA low > 43
Burkholderia phytofirmans PsJN 0.51 BPHYT_RS33610 DNA polymerase I 0.08 BPHYT_RS17300 molybdopterin oxidoreductase low > 109
Paraburkholderia graminis OAS925 0.51 ABIE53_004852 DNA polymerase-1 0.08 ABIE53_003626 anaerobic selenocysteine-containing dehydrogenase low > 113
Paraburkholderia bryophila 376MFSha3.1 0.51 H281DRAFT_06022 DNA polymerase I 0.11 H281DRAFT_00707 trimethylamine-N-oxide reductase (cytochrome c) low > 103
Acidovorax sp. GW101-3H11 0.48 Ac3H11_1648 DNA polymerase I (EC 2.7.7.7) 0.09 Ac3H11_4517 Anaerobic dehydrogenases, typically selenocysteine-containing — —
Variovorax sp. SCN45 0.48 GFF4006 DNA polymerase I (EC 2.7.7.7) 0.08 GFF5001 Oxidoreductase, molybdopterin-binding low > 127
Castellaniella sp019104865 MT123 0.47 ABCV34_RS02195 DNA polymerase I 0.39 ABCV34_RS13645 trimethylamine-N-oxide reductase TorA low > 48
Hydrogenophaga sp. GW460-11-11-14-LB1 0.45 GFF5584 DNA polymerase I (EC 2.7.7.7) 0.07 GFF400 Anaerobic dehydrogenases, typically selenocysteine-containing low > 90
Dinoroseobacter shibae DFL-12 0.39 Dshi_2909 DNA polymerase I (RefSeq) 0.32 Dshi_2278 molybdopterin oxidoreductase (RefSeq) low > 64
Azospirillum sp. SherDot2 0.39 MPMX19_04869 DNA polymerase I 0.33 MPMX19_06512 Dimethyl sulfoxide/trimethylamine N-oxide reductase low > 112
Magnetospirillum magneticum AMB-1 0.39 AMB_RS21305 DNA polymerase I 0.08 AMB_RS19330 molybdopterin oxidoreductase family protein — —
Agrobacterium fabrum C58 0.38 Atu0110 DNA polymerase I 0.07 Atu1136 reductase — —
Rhizobium sp. OAE497 0.38 ABIE40_RS00490 DNA polymerase I 0.08 ABIE40_RS06525 molybdopterin oxidoreductase family protein low > 107
Xanthobacter sp. DMC5 0.37 GFF1973 DNA polymerase I 0.07 GFF1751 Dimethyl sulfoxide reductase DmsA — —
Bosea sp. OAE506 0.34 ABIE41_RS03570 DNA polymerase I 0.07 ABIE41_RS17065 molybdopterin oxidoreductase family protein low > 77
Rhodospirillum rubrum S1H 0.34 Rru_A3514 DNA polymerase A (NCBI) 0.45 Rru_A1287 Trimethylamine-N-oxide reductase (cytochrome c) (NCBI) — —
Mycobacterium tuberculosis H37Rv 0.18 Rv1629 Probable DNA polymerase I PolA 0.30 Rv1442 Probable biotin sulfoxide reductase BisC (BDS reductase) (BSO reductase) — —

Not shown: 67 genomes with orthologs for CSW01_00560 only; 1 genomes with orthologs for CSW01_09750 only