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  • Conservation of cofitness between CSW01_04550 and CSW01_09650 in Vibrio cholerae E7946 ATCC 55056

    6 genomes with putative orthologs of both genes

    Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
    Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_04550 pseudouridine synthase 1.0 CSW01_09650 C4-dicarboxylate ABC transporter 0.36 19
    Shewanella loihica PV-4 0.38 Shew_2644 hypothetical protein (RefSeq) 0.47 Shew_1446 dicarboxylate TRAP transporter (succinate, fumarate, L-malate, and alpha-ketoglutarate), solute receptor component (from data) low > 60
    Pseudomonas sp. S08-1 0.34 OH686_08140 Uncharacterized protein YqcC 0.40 OH686_16140 TRAP-type transporter, substrate-binding protein low > 80
    Pseudomonas segetis P6 0.30 MPMX49_01272 putative protein YqcC 0.54 MPMX49_04379 C4-dicarboxylate-binding periplasmic protein DctP low > 75
    Shewanella oneidensis MR-1 0.29 SO1619 conserved hypothetical protein (NCBI ptt file) 0.48 SO3134 dctP C4-dicarboxylate-binding periplasmic protein (NCBI ptt file) low > 76
    Shewanella sp. ANA-3 0.29 Shewana3_2825 dTDP-4-dehydrorhamnose 3,5-epimerase (RefSeq) 0.49 Shewana3_1416 TRAP dicarboxylate transporter, DctP subunit (RefSeq) low > 73
    Pseudomonas stutzeri RCH2 0.27 Psest_1034 Uncharacterized protein conserved in bacteria 0.53 Psest_4268 tripartite ATP-independent periplasmic transporter solute receptor, DctP family — —

    Not shown: 23 genomes with orthologs for CSW01_04550 only; 31 genomes with orthologs for CSW01_09650 only