Conservation of cofitness between CSW01_12785 and CSW01_09555 in Vibrio cholerae E7946 ATCC 55056

35 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_12785 calcium/sodium antiporter 1.0 CSW01_09555 tRNA-(ms[2]io[6]A)-hydroxylase 0.48 9
Serratia liquefaciens MT49 0.55 IAI46_22440 calcium/sodium antiporter 0.65 IAI46_02330 tRNA-(ms[2]io[6]A)-hydroxylase low > 86
Shewanella loihica PV-4 0.52 Shew_3305 CaCA family Na(+)/Ca(+) antiporter (RefSeq) 0.62 Shew_2514 tRNA--hydroxylase (RefSeq) low > 60
Alteromonas macleodii MIT1002 0.50 MIT1002_00833 Inner membrane protein YrbG 0.63 MIT1002_02520 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) low > 70
Shewanella amazonensis SB2B 0.50 Sama_3082 K+-dependent Na+/Ca+ exchanger related-protein (RefSeq) 0.59 Sama_1218 tRNA-hydroxylase (RefSeq) low > 62
Rahnella sp. WP5 0.49 EX31_RS12430 calcium/sodium antiporter 0.40 EX31_RS22630 tRNA-(ms[2]io[6]A)-hydroxylase 0.34 24
Dickeya dadantii 3937 0.47 DDA3937_RS01560 calcium/sodium antiporter 0.69 DDA3937_RS05765 tRNA-(ms[2]io[6]A)-hydroxylase low > 74
Pantoea agglomerans CFBP13505 P0401 0.45 PagCFBP13505_RS09320 calcium/sodium antiporter 0.63 PagCFBP13505_RS08940 tRNA hydroxylase low > 74
Pantoea sp. MT58 0.44 IAI47_17155 calcium/sodium antiporter 0.63 IAI47_16820 tRNA-(ms[2]io[6]A)-hydroxylase low > 76
Enterobacter sp. TBS_079 0.43 MPMX20_04102 Inner membrane protein YrbG 0.62 MPMX20_00558 hypothetical protein low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.41 GFF2940 Inner membrane protein YrbG, predicted calcium/sodium:proton antiporter 0.62 GFF942 tRNA-(ms[2]io[6]A)-hydroxylase (EC 1.-.-.-) low > 78
Enterobacter asburiae PDN3 0.41 EX28DRAFT_3250 K+-dependent Na+/Ca+ exchanger related-protein 0.61 EX28DRAFT_3463 Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA low > 76
Klebsiella michiganensis M5al 0.41 BWI76_RS25235 calcium/sodium antiporter 0.58 BWI76_RS03020 tRNA hydroxylase low > 92
Klebsiella pneumoniae MKP103 0.40 KDGMDA_06050 calcium/sodium antiporter 0.58 KDGMDA_11510 tRNA-(ms[2]io[6]A)-hydroxylase low > 95
Kangiella aquimarina DSM 16071 0.40 B158DRAFT_0953 K+-dependent Na+/Ca+ exchanger related-protein 0.33 B158DRAFT_1015 Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA low > 40
Marinobacter adhaerens HP15 0.39 HP15_3123 Na+/Ca+ antiporter, CaCA family 0.35 HP15_2202 tRNA-(ms(2)io(6)a)-hydroxylase low > 73
Pseudomonas stutzeri RCH2 0.38 Psest_3333 K+-dependent Na+/Ca+ exchanger related-protein 0.31 Psest_2306 Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA low > 67
Pseudomonas segetis P6 0.36 MPMX49_03877 hypothetical protein 0.32 MPMX49_02239 hypothetical protein low > 75
Shewanella sp. ANA-3 0.35 Shewana3_3815 CaCA family Na(+)/Ca(+) antiporter (RefSeq) 0.57 Shewana3_2667 tRNA hydroxylase (RefSeq) 0.44 71
Shewanella oneidensis MR-1 0.34 SO0354 sodium/calcium exchanger (NCBI ptt file) 0.57 SO1788 miaE tRNA-(MS[2]IO[6]A)-hydroxylase (NCBI ptt file) low > 76
Pseudomonas fluorescens FW300-N2E2 0.31 Pf6N2E2_3292 K+-dependent Na+/Ca+ exchanger related-protein 0.31 Pf6N2E2_568 tRNA-(ms[2]io[6]A)-hydroxylase (EC 1.-.-.-) low > 103
Pontibacter actiniarum KMM 6156, DSM 19842 0.31 CA264_12520 sodium:proton exchanger 0.16 CA264_05350 tRNA 2-methylthio-N6-isopentenyl adenosine(37) hydroxylase MiaE low > 74
Pseudomonas fluorescens FW300-N2C3 0.30 AO356_07155 conjugal transfer protein TraR 0.31 AO356_24405 tRNA hydroxylase low > 104
Pseudomonas sp. SVBP6 0.30 COO64_RS04165 calcium/sodium antiporter 0.34 COO64_RS09940 tRNA-(ms[2]io[6]A)-hydroxylase low > 93
Pseudomonas fluorescens GW456-L13 0.30 PfGW456L13_5038 K+-dependent Na+/Ca+ exchanger related-protein 0.32 PfGW456L13_3375 tRNA-(ms[2]io[6]A)-hydroxylase (EC 1.-.-.-) low > 87
Synechococcus elongatus PCC 7942 0.29 Synpcc7942_0242 K+-dependent Na+/Ca+ exchanger related-protein 0.20 Synpcc7942_0914 tRNA-(MS(2)IO(6)A)-hydroxylase-like low > 38
Pseudomonas fluorescens FW300-N2E3 0.29 AO353_05275 conjugal transfer protein TraR 0.32 AO353_22955 tRNA hydroxylase low > 101
Pseudomonas fluorescens FW300-N1B4 0.28 Pf1N1B4_1104 K+-dependent Na+/Ca+ exchanger related-protein 0.31 Pf1N1B4_4567 tRNA-(ms[2]io[6]A)-hydroxylase (EC 1.-.-.-) low > 87
Pseudomonas fluorescens SBW25 0.28 PFLU_RS04280 calcium/sodium antiporter 0.31 PFLU_RS17005 tRNA hydroxylase low > 109
Pseudomonas fluorescens SBW25-INTG 0.28 PFLU_RS04280 calcium/sodium antiporter 0.31 PFLU_RS17005 tRNA hydroxylase low > 109
Pseudomonas syringae pv. syringae B728a ΔmexB 0.27 Psyr_4168 K+-dependent Na+/Ca+ exchanger related-protein 0.30 Psyr_1728 tRNA--hydroxylase low > 86
Pseudomonas syringae pv. syringae B728a 0.27 Psyr_4168 K+-dependent Na+/Ca+ exchanger related-protein 0.30 Psyr_1728 tRNA--hydroxylase low > 86
Pseudomonas simiae WCS417 0.27 PS417_04225 conjugal transfer protein TraR 0.32 PS417_14975 tRNA hydroxylase low > 88
Pseudomonas putida KT2440 0.27 PP_0928 K+-dependent Na+/Ca+ exchanger related-protein 0.32 PP_2188 putative tRNA-(Ms(2)io(6)a)-hydroxylase low > 96
Pseudomonas sp. BP01 0.25 JOY50_RS11010 calcium/sodium antiporter 0.33 JOY50_RS12775 tRNA-(ms[2]io[6]A)-hydroxylase low > 84
Pseudomonas lactucae CFBP13502 0.24 GEMAOFIL_01050 Inner membrane protein YrbG 0.32 GEMAOFIL_03299 hypothetical protein low > 93

Not shown: 32 genomes with orthologs for CSW01_12785 only; 8 genomes with orthologs for CSW01_09555 only