Conservation of cofitness between CSW01_08635 and CSW01_09330 in Vibrio cholerae E7946 ATCC 55056

47 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_08635 tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM 1.0 CSW01_09330 ABC transporter substrate-binding protein 0.42 14
Klebsiella michiganensis M5al 0.50 BWI76_RS09830 tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM 0.38 BWI76_RS20340 histidine ABC transporter substrate-binding protein HisJ low > 92
Escherichia coli ECRC101 0.50 MCAODC_24810 cmoM tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM 0.37 MCAODC_13765 argT lysine/arginine/ornithine ABC transporter substrate-binding protein ArgT low > 87
Escherichia coli ECRC98 0.50 JDDGAC_09030 cmoM tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM 0.37 JDDGAC_26685 argT lysine/arginine/ornithine ABC transporter substrate-binding protein ArgT low > 87
Escherichia coli ECRC102 0.50 NIAGMN_03140 cmoM tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM 0.37 NIAGMN_20495 argT lysine/arginine/ornithine ABC transporter substrate-binding protein ArgT low > 80
Klebsiella pneumoniae MKP103 0.50 KDGMDA_18030 tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM 0.38 KDGMDA_27175 lysine/arginine/ornithine ABC transporter substrate-binding protein ArgT low > 95
Escherichia coli HS(pFamp)R (ATCC 700891) 0.50 OHPLBJKB_02746 tRNA 5-carboxymethoxyuridine methyltransferase 0.38 OHPLBJKB_01395 Lysine/arginine/ornithine-binding periplasmic protein low > 74
Escherichia coli ECRC62 0.50 BNILDI_20235 cmoM tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM 0.37 BNILDI_13265 argT lysine/arginine/ornithine ABC transporter substrate-binding protein ArgT low > 75
Escherichia coli ECRC99 0.50 KEDOAH_22315 cmoM tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM 0.37 KEDOAH_05470 argT lysine/arginine/ornithine ABC transporter substrate-binding protein ArgT — —
Escherichia coli BW25113 0.50 b0921 smtA predicted S-adenosyl-L-methionine-dependent methyltransferase (NCBI) 0.38 b2310 argT lysine/arginine/ornithine transporter subunit (NCBI) low > 76
Escherichia coli ECOR27 0.50 NOLOHH_21980 cmoM tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM 0.37 NOLOHH_14345 argT lysine/arginine/ornithine ABC transporter substrate-binding protein ArgT low > 76
Escherichia coli BL21 0.50 ECD_00925 putative S-adenosyl-L-methionine-dependent methyltransferase 0.38 ECD_02235 lysine/arginine/ornithine transporter subunit low > 61
Escherichia coli ECOR38 0.50 HEPCGN_23105 cmoM tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM 0.38 HEPCGN_21920 argT lysine/arginine/ornithine ABC transporter substrate-binding protein ArgT low > 88
Escherichia fergusonii Becca 0.50 EFB2_03143 tRNA 5-carboxymethoxyuridine methyltransferase 0.38 EFB2_01548 Lysine/arginine/ornithine-binding periplasmic protein low > 86
Escherichia coli ECRC100 0.50 OKFHMN_05420 cmoM tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM 0.37 OKFHMN_22725 argT lysine/arginine/ornithine ABC transporter substrate-binding protein ArgT low > 79
Dickeya dadantii 3937 0.50 DDA3937_RS09875 tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM 0.37 DDA3937_RS14425 transporter substrate-binding domain-containing protein low > 74
Dickeya dianthicola 67-19 0.49 HGI48_RS09885 tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM 0.38 HGI48_RS14395 transporter substrate-binding domain-containing protein low > 71
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.49 GFF3678 S-adenosylmethionine-dependent methyltransferase Functionally Coupled to the MukBEF Chromosome Partitioning Mechanism 0.40 GFF1919 Lysine-arginine-ornithine-binding periplasmic protein precursor (TC 3.A.1.3.1) low > 78
Dickeya dianthicola ME23 0.49 DZA65_RS10220 tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM 0.37 DZA65_RS15325 transporter substrate-binding domain-containing protein low > 75
Rahnella sp. WP5 0.49 EX31_RS18180 tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM 0.37 EX31_RS21705 ABC transporter substrate-binding protein low > 89
Pectobacterium carotovorum WPP14 0.49 HER17_RS12065 tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM 0.37 HER17_RS07030 lysine/arginine/ornithine ABC transporter substrate-binding protein low > 75
Serratia liquefaciens MT49 0.48 IAI46_08715 tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM 0.38 IAI46_12270 ABC transporter substrate-binding protein low > 87
Enterobacter sp. TBS_079 0.47 MPMX20_01579 tRNA 5-carboxymethoxyuridine methyltransferase 0.38 MPMX20_03245 Lysine/arginine/ornithine-binding periplasmic protein low > 85
Enterobacter asburiae PDN3 0.46 EX28DRAFT_2015 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase 0.37 EX28DRAFT_0294 lysine-arginine-ornithine-binding periplasmic protein low > 76
Erwinia amylovora T8 0.43 OLJFJH_16080 tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM 0.36 OLJFJH_11290 lysine/arginine/ornithine ABC transporter substrate-binding protein ArgT low > 58
Pseudomonas sp. S08-1 0.29 OH686_07475 tRNA uridine 5-oxyacetic acid(34) methyltransferase 0.49 OH686_21255 Arginine/ornithine ABC transporter, substrate-binding protein AotJ low > 80
Pseudomonas simiae WCS417 0.29 PS417_03035 SAM-dependent methyltransferase 0.43 PS417_21745 ABC transporter for L-Arginine, substrate-binding component (from data) low > 88
Pseudomonas aeruginosa PA14 0.29 IKLFDK_29635 SAM-dependent methyltransferase 0.49 IKLFDK_03950 L-arginine-binding protein low > 98
Pseudomonas aeruginosa MRSN321 0.29 DY961_RS09715 methyltransferase domain-containing protein 0.49 DY961_RS08030 ABC transporter substrate-binding protein low > 100
Pseudomonas fluorescens FW300-N2C3 0.28 AO356_08125 SAM-dependent methyltransferase 0.47 AO356_01470 ABC transporter substrate-binding protein low > 104
Pseudomonas aeruginosa PUPa3 0.28 DQ20_RS52330 methyltransferase domain-containing protein 0.49 DQ20_RS44770 ABC transporter substrate-binding protein low > 101
Pseudomonas orientalis W4I3 0.28 QF045_RS06070 methyltransferase domain-containing protein 0.42 QF045_RS23850 ABC transporter substrate-binding protein low > 93
Pseudomonas lactucae CFBP13502 0.28 GEMAOFIL_00839 tRNA 5-carboxymethoxyuridine methyltransferase 0.42 GEMAOFIL_04491 Lysine/arginine/ornithine-binding periplasmic protein low > 96
Pseudomonas fluorescens SBW25 0.28 PFLU_RS03115 methyltransferase domain-containing protein 0.43 PFLU_RS23350 ABC transporter substrate-binding protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.28 PFLU_RS03115 methyltransferase domain-containing protein 0.43 PFLU_RS23350 ABC transporter substrate-binding protein low > 109
Pseudomonas fluorescens FW300-N2E2 0.28 Pf6N2E2_3497 3-demethylubiquinone-9 3-methyltransferase (EC 2.1.1.64) 0.45 Pf6N2E2_5660 L-Arginine ABC transporter, periplasmic substrate-binding component (from data) low > 103
Pseudomonas fluorescens FW300-N1B4 0.28 Pf1N1B4_1289 3-demethylubiquinone-9 3-methyltransferase (EC 2.1.1.64) 0.47 Pf1N1B4_5844 Arginine/ornithine ABC transporter, periplasmic arginine/ornithine binding protein low > 87
Pseudomonas sp. DMC3 0.27 GFF3328 tRNA 5-carboxymethoxyuridine methyltransferase 0.47 GFF1595 Lysine/arginine/ornithine-binding periplasmic protein low > 89
Pseudomonas sp. RS175 0.27 PFR28_05234 tRNA 5-carboxymethoxyuridine methyltransferase 0.48 PFR28_01280 Lysine/arginine/ornithine-binding periplasmic protein low > 88
Pseudomonas fluorescens GW456-L13 0.27 PfGW456L13_37 3-demethylubiquinone-9 3-methyltransferase (EC 2.1.1.64) 0.45 PfGW456L13_1964 Arginine/ornithine ABC transporter, periplasmic arginine/ornithine binding protein low > 87
Pseudomonas stutzeri RCH2 0.27 Psest_3358 Methyltransferase domain. 0.36 Psest_0138 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain low > 67
Pseudomonas sp. SVBP6 0.26 COO64_RS26300 methyltransferase domain-containing protein 0.45 COO64_RS08395 ABC transporter substrate-binding protein low > 93
Pseudomonas syringae pv. syringae B728a 0.26 Psyr_0641 smtA protein 0.43 Psyr_3571 L-arginine-binding protein / L-ornithine-binding protein low > 86
Pseudomonas segetis P6 0.26 MPMX49_04011 tRNA 5-carboxymethoxyuridine methyltransferase 0.45 MPMX49_01869 Lysine/arginine/ornithine-binding periplasmic protein low > 75
Pseudomonas syringae pv. syringae B728a ΔmexB 0.26 Psyr_0641 smtA protein 0.43 Psyr_3571 L-arginine-binding protein / L-ornithine-binding protein low > 86
Pseudomonas fluorescens FW300-N2E3 0.26 AO353_13750 SAM-dependent methyltransferase 0.47 AO353_27970 ABC transporter substrate-binding protein low > 101
Pseudomonas sp. BP01 0.26 JOY50_RS23225 methyltransferase domain-containing protein 0.46 JOY50_RS01005 ABC transporter substrate-binding protein low > 84
Pseudomonas putida KT2440 0.25 PP_0578 putative Methyltransferase 0.46 PP_4486 lysine / arginine / ornithine ABC transporter - periplasmic binding protein low > 96

Not shown: 10 genomes with orthologs for CSW01_08635 only; 24 genomes with orthologs for CSW01_09330 only