Conservation of cofitness between CSW01_08925 and CSW01_09120 in Vibrio cholerae E7946 ATCC 55056

44 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_08925 sialic acid-binding protein 1.0 CSW01_09120 aldehyde dehydrogenase 0.61 14
Sinorhizobium meliloti 1021 0.44 SM_b20295 ABC transporter substrate-binding protein 0.68 SMc02689 aldehyde dehydrogenase low > 103
Xanthobacter sp. DMC5 0.26 GFF429 Sialic acid-binding periplasmic protein SiaP 0.67 GFF2064 Aldehyde dehydrogenase
Agrobacterium fabrum C58 0.25 Atu3253 ABC transporter substrate binding protein 0.67 Atu2224 aldehyde dehydrogenase low > 89
Variovorax sp. OAS795 0.25 ABID97_RS05815 sialic acid TRAP transporter substrate-binding protein SiaP 0.66 ABID97_RS15020 aldehyde dehydrogenase low > 91
Rhizobium sp. OAE497 0.25 ABIE40_RS25820 sialic acid TRAP transporter substrate-binding protein SiaP 0.67 ABIE40_RS25730 aldehyde dehydrogenase low > 107
Hydrogenophaga sp. GW460-11-11-14-LB1 0.24 GFF1783 TRAP-type transport system, periplasmic component, predicted N-acetylneuraminate-binding protein 0.70 GFF5395 Aldehyde dehydrogenase (EC 1.2.1.3) low > 90
Echinicola vietnamensis KMM 6221, DSM 17526 0.24 Echvi_3629 tripartite ATP-independent periplasmic transporter solute receptor, DctP family 0.69 Echvi_0481 NAD-dependent aldehyde dehydrogenases low > 79
Dinoroseobacter shibae DFL-12 0.24 Dshi_3326 TRAP dicarboxylate transporter, DctP subunit (RefSeq) 0.69 Dshi_1095 aldehyde dehydrogenase (RefSeq) low > 64
Acidovorax sp. GW101-3H11 0.23 Ac3H11_161 TRAP-type transport system, periplasmic component, predicted N-acetylneuraminate-binding protein 0.69 Ac3H11_4393 Aldehyde dehydrogenase (EC 1.2.1.3) low > 79
Escherichia coli ECOR38 0.23 HEPCGN_14765 yiaO 2,3-diketo-L-gulonate transporter substrate-binding protein YiaO 0.68 HEPCGN_14700 aldB aldehyde dehydrogenase AldB low > 88
Escherichia coli BW25113 0.23 b3579 yiaO predicted transporter (NCBI) 0.68 b3588 aldB aldehyde dehydrogenase B (lactaldehyde dehydrogenase) (VIMSS) low > 76
Escherichia coli BL21 0.23 ECD_03431 2,3-diketo-L-gulonate-binding periplasmic protein 0.68 ECD_03443 aldehyde dehydrogenase B low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.23 OHPLBJKB_00125 2,3-diketo-L-gulonate-binding periplasmic protein YiaO 0.68 OHPLBJKB_00115 Aldehyde dehydrogenase B low > 74
Escherichia coli ECOR27 0.23 NOLOHH_07820 yiaO 2,3-diketo-L-gulonate transporter substrate-binding protein YiaO 0.83 NOLOHH_24575 Aldehyde dehydrogenase
Pseudomonas sp. RS175 0.22 PFR28_01614 hypothetical protein 0.73 PFR28_01819 Aldehyde dehydrogenase low > 88
Azospirillum brasilense Sp245 0.22 AZOBR_RS16140 C4-dicarboxylate ABC transporter 0.31 AZOBR_RS22315 aldehyde dehydrogenase low > 97
Pseudomonas segetis P6 0.22 ACVTMO_RS11805 TRAP transporter substrate-binding protein 0.74 ACVTMO_RS05110 exaC acetaldehyde dehydrogenase ExaC low > 75
Pseudomonas fluorescens FW300-N2E2 0.22 Pf6N2E2_1301 TRAP-type C4-dicarboxylate transport system, periplasmic component 0.73 Pf6N2E2_1381 Aldehyde dehydrogenase (EC 1.2.1.3) low > 103
Escherichia coli Nissle 1917 0.22 ECOLIN_RS20470 2,3-diketo-L-gulonate TRAP transporter substrate-binding protein YiaO 0.68 ECOLIN_RS26555 aldehyde dehydrogenase AldB
Escherichia coli ECRC62 0.22 BNILDI_03725 yiaO 2,3-diketo-L-gulonate transporter substrate-binding protein YiaO 0.68 BNILDI_03775 aldB aldehyde dehydrogenase AldB low > 75
Pantoea agglomerans CFBP13505 P0401 0.22 PagCFBP13505_RS16465 TRAP transporter substrate-binding protein 0.69 PagCFBP13505_RS19705 aldehyde dehydrogenase family protein low > 74
Escherichia fergusonii Becca 0.22 EFB2_00227 2,3-diketo-L-gulonate-binding periplasmic protein YiaO 0.68 EFB2_00222 Aldehyde dehydrogenase B low > 86
Variovorax sp. SCN45 0.22 GFF6468 TRAP-type transport system, periplasmic component, predicted N-acetylneuraminate-binding protein 0.71 GFF6442 Aldehyde dehydrogenase (EC 1.2.1.3) low > 127
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.22 GFF430 2,3-diketo-L-gulonate-binding periplasmic protein yiaO precursor 0.68 GFF423 Aldehyde dehydrogenase B (EC 1.2.1.22) low > 78
Klebsiella michiganensis M5al 0.22 BWI76_RS24125 hypothetical protein 0.71 BWI76_RS21985 acetaldehyde dehydrogenase (EC 1.2.1.3) (from data) low > 92
Alteromonas macleodii MIT1002 0.22 MIT1002_02426 Extracytoplasmic solute receptor protein YiaO 0.72 MIT1002_03321 Aldehyde dehydrogenase B low > 70
Castellaniella sp019104865 MT123 0.22 ABCV34_RS07845 TRAP transporter substrate-binding protein 0.67 ABCV34_RS02705 aldehyde dehydrogenase family protein low > 48
Pantoea sp. MT58 0.21 IAI47_03230 TRAP transporter substrate-binding protein 0.70 IAI47_11705 aldehyde dehydrogenase low > 76
Pseudomonas fluorescens FW300-N2C3 0.21 AO356_25645 ABC transporter substrate-binding protein 0.73 AO356_28025 aldehyde dehydrogenase low > 104
Herbaspirillum seropedicae SmR1 0.21 HSERO_RS19065 ABC transporter substrate-binding protein 0.69 HSERO_RS09465 aldehyde dehydrogenase low > 78
Azospirillum sp. SherDot2 0.21 MPMX19_06061 Solute-binding protein 0.69 MPMX19_05663 Aldehyde dehydrogenase low > 112
Paraburkholderia sabiae LMG 24235 0.21 QEN71_RS16015 TRAP transporter substrate-binding protein 0.70 QEN71_RS00050 aldehyde dehydrogenase family protein low > 153
Paraburkholderia graminis OAS925 0.21 ABIE53_005305 tripartite ATP-independent transporter DctP family solute receptor 0.69 ABIE53_000363 aldehyde dehydrogenase low > 113
Enterobacter sp. TBS_079 0.20 MPMX20_04349 Solute-binding protein 0.67 MPMX20_00142 Aldehyde dehydrogenase B low > 85
Rhodopseudomonas palustris CGA009 0.20 TX73_014410 TRAP transporter substrate-binding protein 0.65 TX73_006195 aldehyde dehydrogenase 0.27 80
Pseudomonas putida KT2440 0.20 PP_1169 D-glucuronate / D-galacturonate TRAP transporter, solute receptor component (from data) 0.72 PP_0545 aldehyde dehydrogenase low > 96
Pectobacterium carotovorum WPP14 0.20 HER17_RS19675 TRAP transporter substrate-binding protein 0.65 HER17_RS21100 aldehyde dehydrogenase low > 75
Rahnella sp. WP5 0.19 EX31_RS08010 TRAP transporter substrate-binding protein 0.68 EX31_RS05750 aldehyde dehydrogenase low > 89
Pseudomonas syringae pv. syringae B728a 0.19 Psyr_0900 TRAP dicarboxylate transporter- DctP subunit 0.70 Psyr_0629 Aldehyde dehydrogenase (NAD+) low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.19 Psyr_0900 TRAP dicarboxylate transporter- DctP subunit 0.70 Psyr_0629 Aldehyde dehydrogenase (NAD+) low > 86
Xanthomonas campestris pv. campestris strain 8004 0.18 Xcc-8004.201.1 TRAP-type C4-dicarboxylate transport system, periplasmic component 0.69 Xcc-8004.135.1 Aldehyde dehydrogenase (EC 1.2.1.3) low > 74
Pseudomonas orientalis W4I3 0.18 QF045_RS19030 TRAP transporter substrate-binding protein 0.71 QF045_RS27095 aldehyde dehydrogenase family protein low > 93
Pseudomonas simiae WCS417 0.18 PS417_17370 C4-dicarboxylate ABC transporter 0.72 PS417_24810 aldehyde dehydrogenase low > 88
Marinobacter adhaerens HP15 0.15 HP15_2560 TRAP dicarboxylate transporter- DctP subunit 0.76 HP15_3144 Aldehyde dehydrogenase (EC 1.2.1.3) (from data) low > 73

Not shown: 3 genomes with orthologs for CSW01_08925 only; 53 genomes with orthologs for CSW01_09120 only