Conservation of cofitness between CSW01_08105 and CSW01_08760 in Vibrio cholerae E7946 ATCC 55056

27 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_08105 type IV pilus biogenesis/stability protein PilW 1.0 CSW01_08760 NAD-dependent succinate-semialdehyde dehydrogenase 0.54 13
Shewanella oneidensis MR-1 0.32 SO3314 fimbrial biogenesis and twitching motility protein, putative (NCBI ptt file) 0.56 SO1275 gabD succinate-semialdehyde dehydrogenase (NADP+) [EC: 1.2.1.16] (from data) low > 76
Shewanella sp. ANA-3 0.31 Shewana3_1227 type IV pilus biogenesis/stability protein PilW (RefSeq) 0.56 Shewana3_3092 succinate semialdehyde dehydrogenase (RefSeq) — —
Shewanella loihica PV-4 0.31 Shew_1288 type IV pilus biogenesis/stability protein PilW (RefSeq) 0.48 Shew_3173 succinic semialdehyde dehydrogenase (RefSeq) low > 60
Shewanella amazonensis SB2B 0.31 Sama_2367 fimbrial biogenesis and twitching motility protein, putative (RefSeq) 0.53 Sama_2637 succinate-semialdehyde dehydrogenase (NAD(P)(+)) (RefSeq) low > 62
Rahnella sp. WP5 0.28 EX31_RS20520 type IV pilus biogenesis/stability protein PilW 0.50 EX31_RS12300 NAD-dependent succinate-semialdehyde dehydrogenase low > 89
Serratia liquefaciens MT49 0.28 IAI46_19285 type IV pilus biogenesis/stability protein PilW 0.54 IAI46_22160 NAD-dependent succinate-semialdehyde dehydrogenase low > 87
Pectobacterium carotovorum WPP14 0.28 HER17_RS06090 type IV pilus biogenesis/stability protein PilW 0.55 HER17_RS09885 NAD-dependent succinate-semialdehyde dehydrogenase low > 75
Dickeya dianthicola 67-19 0.27 HGI48_RS15585 type IV pilus biogenesis/stability protein PilW 0.54 HGI48_RS11855 NAD-dependent succinate-semialdehyde dehydrogenase low > 71
Dickeya dianthicola ME23 0.26 DZA65_RS16660 type IV pilus biogenesis/stability protein PilW 0.54 DZA65_RS12400 NAD-dependent succinate-semialdehyde dehydrogenase low > 75
Rhodanobacter sp000427505 FW510-R12 0.23 LRK53_RS11190 type IV pilus biogenesis/stability protein PilW 0.26 LRK53_RS00385 aldehyde dehydrogenase family protein low > 59
Pseudomonas aeruginosa MRSN321 0.20 DY961_RS13895 pilF;inference=COORDINATES type 4a pilus biogenesis protein PilF 0.57 DY961_RS21260 gabD;go_function=succinate-semialdehyde NADP-dependent succinate-semialdehyde dehydrogenase low > 100
Pseudomonas aeruginosa PA14 0.20 IKLFDK_19595 type 4a pilus biogenesis protein PilF 0.57 IKLFDK_24135 NADP-dependent succinate-semialdehyde dehydrogenase low > 98
Pseudomonas aeruginosa PUPa3 0.20 DQ20_RS43205 pilF;inference=COORDINATES type 4a pilus biogenesis protein PilF 0.57 DQ20_RS38020 gabD;go_function=succinate-semialdehyde NADP-dependent succinate-semialdehyde dehydrogenase low > 101
Pseudomonas sp. S08-1 0.20 OH686_17520 type IV pilus biogenesis/stability protein PilW 0.57 OH686_11875 Succinate-semialdehyde dehydrogenase [NAD(P)+] — —
Ralstonia solanacearum PSI07 0.19 RPSI07_RS18110 type IV pilus biogenesis/stability protein PilW 0.55 RPSI07_RS23810 NAD-dependent succinate-semialdehyde dehydrogenase low > 81
Ralstonia solanacearum GMI1000 0.19 RS_RS06075 type IV pilus biogenesis/stability protein PilW 0.54 RS_RS00140 NAD-dependent succinate-semialdehyde dehydrogenase — —
Pantoea agglomerans CFBP13505 P0401 0.18 PagCFBP13505_RS14935 type IV pilus biogenesis/stability protein PilW 0.52 PagCFBP13505_RS01475 NAD-dependent succinate-semialdehyde dehydrogenase low > 74
Ralstonia sp. UNC404CL21Col 0.18 ABZR87_RS10905 type IV pilus biogenesis/stability protein PilW 0.55 ABZR87_RS05195 NAD-dependent succinate-semialdehyde dehydrogenase low > 80
Ralstonia solanacearum IBSBF1503 0.18 RALBFv3_RS15265 type IV pilus biogenesis/stability protein PilW 0.55 RALBFv3_RS09540 NAD-dependent succinate-semialdehyde dehydrogenase — —
Ralstonia solanacearum UW163 0.18 UW163_RS12730 type IV pilus biogenesis/stability protein PilW 0.55 UW163_RS04040 NAD-dependent succinate-semialdehyde dehydrogenase — —
Pantoea sp. MT58 0.17 IAI47_05045 type IV pilus biogenesis/stability protein PilW 0.52 IAI47_07580 NAD-dependent succinate-semialdehyde dehydrogenase low > 76
Acidovorax sp. GW101-3H11 0.17 Ac3H11_1792 Type IV pilus biogenesis protein PilF 0.55 Ac3H11_1480 Aldehyde dehydrogenase B (EC 1.2.1.22) low > 79
Hydrogenophaga sp. GW460-11-11-14-LB1 0.16 GFF4865 Type IV pilus biogenesis protein PilF 0.50 GFF1556 Succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) low > 90
Marinobacter adhaerens HP15 0.16 HP15_1491 type IV pilus biogenesis protein PilF 0.53 HP15_2020 succinate-semialdehyde dehydrogenase I — —
Dechlorosoma suillum PS 0.15 Dsui_3144 type IV pilus biogenesis/stability protein PilW 0.54 Dsui_0437 succinate-semialdehyde dehydrogenase low > 51
Variovorax sp. OAS795 0.15 ABID97_RS14215 type IV pilus biogenesis/stability protein PilW 0.54 ABID97_RS11235 NAD-dependent succinate-semialdehyde dehydrogenase low > 91
Variovorax sp. SCN45 0.14 GFF993 Type IV pilus biogenesis protein PilF 0.53 GFF5612 Succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) low > 127

Not shown: 6 genomes with orthologs for CSW01_08105 only; 77 genomes with orthologs for CSW01_08760 only