Conservation of cofitness between CSW01_07830 and CSW01_08220 in Vibrio cholerae E7946 ATCC 55056

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_07830 6-phospho-beta-glucosidase 1.0 CSW01_08220 16S rRNA pseudouridine(516) synthase 0.46 2
Erwinia amylovora T8 0.74 OLJFJH_07935 6-phospho-beta-glucosidase 0.52 OLJFJH_11710 16S rRNA pseudouridine(516) synthase RsuA low > 58
Pectobacterium carotovorum WPP14 0.73 HER17_RS00060 6-phospho-beta-glucosidase 0.53 HER17_RS12950 16S rRNA pseudouridine(516) synthase RsuA low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.73 OHPLBJKB_00814 6-phospho-beta-glucosidase BglA 0.56 OHPLBJKB_01526 Ribosomal small subunit pseudouridine synthase A low > 74
Escherichia coli ECRC62 0.73 BNILDI_09990 bglA 6-phospho-beta-glucosidase BglA 0.56 BNILDI_13855 rsuA 16S rRNA pseudouridine(516) synthase RsuA low > 75
Escherichia fergusonii Becca 0.73 EFB2_01000 6-phospho-beta-glucosidase BglA 0.56 EFB2_01673 Ribosomal small subunit pseudouridine synthase A low > 86
Escherichia coli Nissle 1917 0.73 ECOLIN_RS16160 6-phospho-beta-glucosidase BglA 0.56 ECOLIN_RS12760 16S rRNA pseudouridine(516) synthase RsuA — —
Escherichia coli BL21 0.73 ECD_02733 6-phospho-beta-glucosidase A 0.56 ECD_02113 16S rRNA pseudouridine(516) synthase low > 61
Escherichia coli BW25113 0.73 b2901 bglA 6-phospho-beta-glucosidase A (NCBI) 0.56 b2183 rsuA 16S rRNA pseudouridylate 516 synthase (NCBI) low > 76
Escherichia coli ECOR27 0.73 NOLOHH_11455 bglA 6-phospho-beta-glucosidase BglA 0.56 NOLOHH_14935 rsuA 16S rRNA pseudouridine(516) synthase RsuA low > 76
Escherichia coli ECOR38 0.73 HEPCGN_18825 bglA 6-phospho-beta-glucosidase BglA 0.55 HEPCGN_22625 rsuA 16S rRNA pseudouridine(516) synthase RsuA low > 88
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.73 GFF2999 6-phospho-beta-glucosidase (EC 3.2.1.86) 0.57 GFF3753 Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70) low > 78
Enterobacter asburiae PDN3 0.72 EX28DRAFT_2953 Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase 0.58 EX28DRAFT_0378 pseudouridine synthase low > 76
Klebsiella pneumoniae MKP103 0.72 KDGMDA_04340 6-phospho-beta-glucosidase BglA 0.56 KDGMDA_26750 16S rRNA pseudouridine(516) synthase RsuA low > 95
Escherichia coli ECRC99 0.72 KEDOAH_08605 bglA 6-phospho-beta-glucosidase BglA 0.56 KEDOAH_04825 rsuA 16S rRNA pseudouridine(516) synthase RsuA — —
Escherichia coli ECRC98 0.72 JDDGAC_23175 bglA 6-phospho-beta-glucosidase BglA 0.56 JDDGAC_27320 rsuA 16S rRNA pseudouridine(516) synthase RsuA low > 87
Escherichia coli ECRC100 0.72 OKFHMN_19535 bglA 6-phospho-beta-glucosidase BglA 0.56 OKFHMN_23360 rsuA 16S rRNA pseudouridine(516) synthase RsuA low > 79
Escherichia coli ECRC101 0.72 MCAODC_10055 bglA 6-phospho-beta-glucosidase BglA 0.56 MCAODC_14410 rsuA 16S rRNA pseudouridine(516) synthase RsuA low > 88
Escherichia coli ECRC102 0.72 NIAGMN_17300 bglA 6-phospho-beta-glucosidase BglA 0.56 NIAGMN_21125 rsuA 16S rRNA pseudouridine(516) synthase RsuA low > 80
Pantoea sp. MT58 0.72 IAI47_03785 6-phospho-beta-glucosidase 0.54 IAI47_06585 16S rRNA pseudouridine(516) synthase RsuA low > 76
Pantoea agglomerans CFBP13505 P0401 0.72 PagCFBP13505_RS15915 6-phospho-beta-glucosidase 0.53 PagCFBP13505_RS00670 16S rRNA pseudouridine(516) synthase RsuA low > 74
Erwinia tracheiphila HP pepo 2.2 0.72 IJEDHG_03240 6-phospho-beta-glucosidase 0.54 IJEDHG_16035 rsuA 16S rRNA pseudouridine(516) synthase RsuA low > 61
Serratia liquefaciens MT49 0.72 IAI46_12795 6-phospho-beta-glucosidase 0.55 IAI46_17345 16S rRNA pseudouridine(516) synthase RsuA low > 86
Rahnella sp. WP5 0.72 EX31_RS12835 6-phospho-beta-glucosidase 0.53 EX31_RS19195 16S rRNA pseudouridine(516) synthase RsuA low > 89
Enterobacter sp. TBS_079 0.72 MPMX20_03760 6-phospho-beta-glucosidase BglA 0.58 MPMX20_03149 Ribosomal small subunit pseudouridine synthase A low > 85
Erwinia tracheiphila SCR3 0.71 LU632_RS05930 6-phospho-beta-glucosidase 0.54 LU632_RS17595 rsuA 16S rRNA pseudouridine(516) synthase RsuA low > 74
Klebsiella michiganensis M5al 0.71 BWI76_RS23855 6-phospho-beta-glucosidase 0.55 BWI76_RS19810 16S rRNA pseudouridine(516) synthase — —
Dickeya dadantii 3937 0.66 DDA3937_RS01935 6-phospho-beta-glucosidase 0.55 DDA3937_RS09160 16S rRNA pseudouridine(516) synthase RsuA 0.35 19
Dickeya dianthicola 67-19 0.66 HGI48_RS01910 6-phospho-beta-glucosidase 0.55 HGI48_RS09200 16S rRNA pseudouridine(516) synthase RsuA low > 71
Dickeya dianthicola ME23 0.66 DZA65_RS01980 6-phospho-beta-glucosidase 0.55 DZA65_RS09500 16S rRNA pseudouridine(516) synthase RsuA low > 75
Magnetospirillum magneticum AMB-1 0.20 AMB_RS01115 beta-glucosidase 0.28 AMB_RS12445 rRNA pseudouridine synthase low > 64
Rhodanobacter denitrificans MT42 0.19 LRK55_RS08450 GH1 family beta-glucosidase 0.29 LRK55_RS15690 pseudouridine synthase low > 63
Rhodanobacter denitrificans FW104-10B01 0.19 LRK54_RS08685 GH1 family beta-glucosidase 0.29 LRK54_RS15935 rRNA pseudouridine synthase low > 59
Rhodanobacter sp. FW510-T8 0.18 OKGIIK_15450 bglB GH1 family beta-glucosidase 0.28 OKGIIK_09050 Pseudouridine synthase low > 53
Rhodanobacter sp000427505 FW510-R12 0.18 LRK53_RS02460 GH1 family beta-glucosidase 0.29 LRK53_RS12840 rRNA pseudouridine synthase low > 59
Paraburkholderia sabiae LMG 24235 0.18 QEN71_RS09800 GH1 family beta-glucosidase 0.27 QEN71_RS03150 16S rRNA pseudouridine(516) synthase low > 153
Burkholderia phytofirmans PsJN 0.18 BPHYT_RS29195 beta-glucosidase 0.27 BPHYT_RS15560 pseudouridine synthase low > 109
Shewanella amazonensis SB2B 0.17 Sama_1402 Beta-glucosidase (RefSeq) 0.54 Sama_2614 pseudouridine synthase, Rsu (RefSeq) low > 62
Paraburkholderia graminis OAS925 0.17 ABIE53_005574 beta-glucosidase 0.27 ABIE53_003276 16S rRNA pseudouridine516 synthase low > 113
Caulobacter crescentus NA1000 Δfur 0.16 CCNA_02220 beta-glucosidase 0.34 CCNA_01915 ribosomal small subunit pseudouridine synthase A low > 67
Caulobacter crescentus NA1000 0.16 CCNA_02220 beta-glucosidase 0.34 CCNA_01915 ribosomal small subunit pseudouridine synthase A low > 66

Not shown: 16 genomes with orthologs for CSW01_07830 only; 40 genomes with orthologs for CSW01_08220 only