Conservation of cofitness between CSW01_10145 and CSW01_07810 in Vibrio cholerae E7946 ATCC 55056

41 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_10145 ribonuclease E 1.0 CSW01_07810 glycerophosphoryl diester phosphodiesterase 0.66 20
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.45 GFF3365 Ribonuclease E (EC 3.1.26.12) 0.19 GFF559 Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) — —
Pectobacterium carotovorum WPP14 0.44 HER17_RS08610 ribonuclease E 0.21 HER17_RS00630 glycerophosphodiester phosphodiesterase low > 75
Serratia liquefaciens MT49 0.44 IAI46_09750 ribonuclease E 0.22 IAI46_01010 glycerophosphodiester phosphodiesterase — —
Enterobacter sp. TBS_079 0.43 MPMX20_01765 Ribonuclease E 0.18 MPMX20_04325 Glycerophosphodiester phosphodiesterase, cytoplasmic low > 85
Escherichia coli HS(pFamp)R (ATCC 700891) 0.43 OHPLBJKB_02581 Ribonuclease E 0.20 OHPLBJKB_00254 Glycerophosphodiester phosphodiesterase, cytoplasmic low > 74
Rahnella sp. WP5 0.43 EX31_RS24395 ribonuclease E 0.22 EX31_RS14740 glycerophosphodiester phosphodiesterase low > 89
Dickeya dianthicola 67-19 0.43 HGI48_RS13225 ribonuclease E 0.21 HGI48_RS10830 glycerophosphoryl diester phosphodiesterase — —
Erwinia tracheiphila HP pepo 2.2 0.43 IJEDHG_00720 rne ribonuclease E 0.17 IJEDHG_07970 ugpQ glycerophosphodiester phosphodiesterase low > 61
Escherichia coli Nissle 1917 0.43 ECOLIN_RS06270 ribonuclease E 0.19 ECOLIN_RS19725 glycerophosphodiester phosphodiesterase low > 55
Shewanella oneidensis MR-1 0.43 SO2785 rne ribonuclease E (NCBI ptt file) 0.19 SO0587 glycerophosphoryl diester phosphodiesterase, putative (NCBI ptt file) low > 76
Escherichia fergusonii Becca 0.43 EFB2_02890 Ribonuclease E 0.20 EFB2_00373 Glycerophosphodiester phosphodiesterase, cytoplasmic low > 86
Shewanella sp. ANA-3 0.43 Shewana3_2567 RNAse E (RefSeq) 0.20 Shewana3_0585 glycerophosphoryl diester phosphodiesterase (RefSeq) low > 73
Escherichia coli ECRC62 0.43 BNILDI_19310 rne ribonuclease E 0.19 BNILDI_02925 ugpQ glycerophosphodiester phosphodiesterase low > 75
Escherichia coli BL21 0.43 ECD_01080 endoribonuclease; RNA-binding protein 0.20 ECD_03298 glycerophosphodiester phosphodiesterase, cytosolic low > 61
Klebsiella pneumoniae MKP103 0.43 KDGMDA_18655 ribonuclease E 0.19 KDGMDA_07160 glycerophosphodiester phosphodiesterase low > 95
Escherichia coli BW25113 0.43 b1084 rne fused ribonucleaseE: endoribonuclease/RNA-binding protein/RNA degradosome binding protein (NCBI) 0.20 b3449 ugpQ cytoplasmic glycerophosphodiester phosphodiesterase (NCBI) low > 76
Escherichia coli ECOR38 0.43 HEPCGN_23860 rne ribonuclease E 0.19 HEPCGN_15610 ugpQ glycerophosphodiester phosphodiesterase low > 88
Escherichia coli ECOR27 0.43 NOLOHH_21150 rne ribonuclease E 0.19 NOLOHH_08580 ugpQ glycerophosphodiester phosphodiesterase low > 76
Pantoea sp. MT58 0.43 IAI47_12110 ribonuclease E 0.23 IAI47_01610 glycerophosphodiester phosphodiesterase low > 76
Escherichia coli ECRC98 0.43 JDDGAC_07280 rne ribonuclease E 0.20 JDDGAC_20420 ugpQ glycerophosphodiester phosphodiesterase low > 87
Escherichia coli ECRC102 0.43 NIAGMN_24210 rne ribonuclease E 0.20 NIAGMN_14560 ugpQ glycerophosphodiester phosphodiesterase low > 80
Escherichia coli ECRC100 0.43 OKFHMN_03620 rne ribonuclease E 0.20 OKFHMN_16790 ugpQ glycerophosphodiester phosphodiesterase low > 79
Escherichia coli ECRC99 0.43 KEDOAH_24135 rne ribonuclease E 0.20 KEDOAH_11350 ugpQ glycerophosphodiester phosphodiesterase — —
Escherichia coli ECRC101 0.43 MCAODC_22980 rne ribonuclease E 0.20 MCAODC_07320 ugpQ glycerophosphodiester phosphodiesterase low > 87
Dickeya dianthicola ME23 0.42 DZA65_RS13700 ribonuclease E 0.22 DZA65_RS11295 glycerophosphoryl diester phosphodiesterase — —
Enterobacter asburiae PDN3 0.42 EX28DRAFT_1846 ribonuclease, Rne/Rng family 0.20 EX28DRAFT_4281 Glycerophosphoryl diester phosphodiesterase — —
Pantoea agglomerans CFBP13505 P0401 0.41 PagCFBP13505_RS05225 ribonuclease E 0.23 PagCFBP13505_RS18125 glycerophosphodiester phosphodiesterase low > 74
Klebsiella michiganensis M5al 0.41 BWI76_RS11040 ribonuclease E 0.20 BWI76_RS26285 glycerophosphodiester phosphodiesterase low > 92
Pseudomonas fluorescens FW300-N2E3 0.35 AO353_01410 ribonuclease E 0.16 AO353_00385 glycerophosphodiester phosphodiesterase low > 101
Pseudomonas lactucae CFBP13502 0.35 GEMAOFIL_04441 Ribonuclease E 0.16 GEMAOFIL_01663 Glycerophosphodiester phosphodiesterase, cytoplasmic low > 96
Pseudomonas fluorescens SBW25 0.35 PFLU_RS23100 ribonuclease E 0.16 PFLU_RS07730 glycerophosphodiester phosphodiesterase low > 109
Pseudomonas fluorescens SBW25-INTG 0.35 PFLU_RS23100 ribonuclease E 0.16 PFLU_RS07730 glycerophosphodiester phosphodiesterase low > 109
Pseudomonas fluorescens FW300-N1B4 0.35 Pf1N1B4_461 Ribonuclease E (EC 3.1.26.12) 0.17 Pf1N1B4_3920 Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) — —
Pseudomonas simiae WCS417 0.35 PS417_21485 ribonuclease E 0.16 PS417_07655 glycerophosphodiester phosphodiesterase — —
Pseudomonas orientalis W4I3 0.35 QF045_RS23565 ribonuclease E 0.16 QF045_RS10300 glycerophosphodiester phosphodiesterase family protein low > 93
Ralstonia solanacearum UW163 0.33 UW163_RS11835 ribonuclease E/G 0.23 UW163_RS13035 glycerophosphodiester phosphodiesterase — —
Ralstonia solanacearum IBSBF1503 0.33 RALBFv3_RS14370 ribonuclease E/G 0.23 RALBFv3_RS15575 glycerophosphodiester phosphodiesterase — —
Ralstonia solanacearum GMI1000 0.33 RS_RS05150 ribonuclease E 0.21 RS_RS06355 glycerophosphodiester phosphodiesterase — —
Cupriavidus basilensis FW507-4G11 0.32 RR42_RS14160 ribonuclease E 0.23 RR42_RS12950 membrane protein — —
Ralstonia solanacearum PSI07 0.32 RPSI07_RS19090 ribonuclease E/G 0.23 RPSI07_RS17780 glycerophosphodiester phosphodiesterase — —
Paraburkholderia bryophila 376MFSha3.1 0.32 H281DRAFT_04339 RNAse E (EC 3.1.26.12) 0.21 H281DRAFT_02044 glycerophosphoryl diester phosphodiesterase — —

Not shown: 7 genomes with orthologs for CSW01_10145 only; 36 genomes with orthologs for CSW01_07810 only