Conservation of cofitness between CSW01_06960 and CSW01_07790 in Vibrio cholerae E7946 ATCC 55056

71 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_06960 molecular chaperone 1.0 CSW01_07790 glycerol-3-phosphate transporter permease 0.45 20
Serratia liquefaciens MT49 0.55 IAI46_18955 molecular chaperone 0.43 IAI46_00995 sn-glycerol-3-phosphate ABC transporter permease UgpA low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.54 OHPLBJKB_01636 Chaperone protein DnaK 0.41 OHPLBJKB_00251 sn-glycerol-3-phosphate transport system permease protein UgpA low > 74
Escherichia coli BL21 0.54 ECD_01975 Hsp70 chaperone family protein 0.41 ECD_03301 sn-glycerol-3-phosphate ABC transporter permease low > 61
Escherichia coli ECOR27 0.54 NOLOHH_15595 yegD molecular chaperone 0.41 NOLOHH_08565 ugpA sn-glycerol-3-phosphate ABC transporter permease UgpA low > 76
Escherichia coli BW25113 0.54 b2069 yegD putative heat shock protein (VIMSS) 0.41 b3452 ugpA glycerol-3-phosphate transporter subunit (NCBI) low > 76
Pantoea sp. MT58 0.54 IAI47_06890 molecular chaperone 0.43 IAI47_01595 sn-glycerol-3-phosphate ABC transporter permease UgpA low > 76
Escherichia coli ECRC62 0.54 BNILDI_14500 yegD molecular chaperone 0.41 BNILDI_02940 ugpA sn-glycerol-3-phosphate ABC transporter permease UgpA low > 75
Escherichia coli Nissle 1917 0.54 ECOLIN_RS12175 molecular chaperone 0.41 ECOLIN_RS19740 sn-glycerol-3-phosphate ABC transporter permease UgpA low > 55
Klebsiella michiganensis M5al 0.54 BWI76_RS19135 molecular chaperone 0.42 BWI76_RS26300 glycerol-3-phosphate transporter permease low > 92
Pantoea agglomerans CFBP13505 P0401 0.54 PagCFBP13505_RS01000 molecular chaperone 0.43 PagCFBP13505_RS18110 sn-glycerol-3-phosphate ABC transporter permease UgpA 0.54 45
Escherichia fergusonii Becca 0.54 EFB2_01785 Chaperone protein DnaK 0.40 EFB2_00370 sn-glycerol-3-phosphate transport system permease protein UgpA low > 86
Enterobacter asburiae PDN3 0.54 EX28DRAFT_0485 Molecular chaperone 0.42 EX28DRAFT_4284 ABC-type sugar transport systems, permease components low > 76
Escherichia coli ECOR38 0.54 HEPCGN_02955 yegD molecular chaperone 0.41 HEPCGN_15595 ugpA sn-glycerol-3-phosphate ABC transporter permease UgpA low > 88
Klebsiella pneumoniae MKP103 0.54 KDGMDA_26270 molecular chaperone 0.41 KDGMDA_07175 sn-glycerol-3-phosphate ABC transporter permease UgpA low > 95
Enterobacter sp. TBS_079 0.54 MPMX20_03051 Chaperone protein DnaK 0.42 MPMX20_04328 sn-glycerol-3-phosphate transport system permease protein UgpA low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.54 GFF3857 Putative heat shock protein YegD 0.42 GFF556 Glycerol-3-phosphate ABC transporter, permease protein UgpA (TC 3.A.1.1.3) low > 78
Rahnella sp. WP5 0.53 EX31_RS20290 molecular chaperone 0.44 EX31_RS14755 sn-glycerol-3-phosphate ABC transporter permease UgpA low > 89
Erwinia amylovora T8 0.53 OLJFJH_11985 molecular chaperone 0.43 OLJFJH_04325 sn-glycerol-3-phosphate ABC transporter permease UgpA low > 58
Pectobacterium carotovorum WPP14 0.52 HER17_RS08760 molecular chaperone 0.43 HER17_RS00615 sn-glycerol-3-phosphate ABC transporter permease UgpA low > 75
Dickeya dianthicola 67-19 0.52 HGI48_RS13075 molecular chaperone 0.39 HGI48_RS20645 sn-glycerol-3-phosphate ABC transporter permease UgpA low > 71
Dickeya dianthicola ME23 0.52 DZA65_RS13540 molecular chaperone 0.39 DZA65_RS21660 sn-glycerol-3-phosphate ABC transporter permease UgpA low > 75
Dickeya dadantii 3937 0.52 DDA3937_RS13010 molecular chaperone 0.39 DDA3937_RS00725 sn-glycerol-3-phosphate ABC transporter permease UgpA low > 74
Escherichia coli ECRC102 0.50 NIAGMN_22195 yegD molecular chaperone 0.41 NIAGMN_14545 ugpA sn-glycerol-3-phosphate ABC transporter permease UgpA low > 80
Escherichia coli ECRC101 0.50 MCAODC_20690 yegD molecular chaperone 0.41 MCAODC_07305 ugpA sn-glycerol-3-phosphate ABC transporter permease UgpA low > 87
Escherichia coli ECRC98 0.50 JDDGAC_28360 yegD molecular chaperone 0.41 JDDGAC_20405 ugpA sn-glycerol-3-phosphate ABC transporter permease UgpA low > 87
Escherichia coli ECRC99 0.50 KEDOAH_03900 yegD molecular chaperone 0.41 KEDOAH_11365 ugpA sn-glycerol-3-phosphate ABC transporter permease UgpA
Escherichia coli ECRC100 0.50 OKFHMN_24250 yegD molecular chaperone 0.41 OKFHMN_16775 ugpA sn-glycerol-3-phosphate ABC transporter permease UgpA low > 79
Pseudomonas sp. SVBP6 0.22 COO64_RS18130 Hsp70 family protein 0.14 COO64_RS04560 carbohydrate ABC transporter permease low > 93
Pseudomonas syringae pv. syringae B728a ΔmexB 0.21 Psyr_4441 heat shock protein YegD 0.27 Psyr_4503 carbohydrate ABC transporter membrane protein 1, CUT1 family low > 86
Pseudomonas orientalis W4I3 0.21 QF045_RS05810 Hsp70 family protein 0.15 QF045_RS17185 sugar ABC transporter permease low > 93
Pseudomonas syringae pv. syringae B728a 0.21 Psyr_4441 heat shock protein YegD 0.27 Psyr_4503 carbohydrate ABC transporter membrane protein 1, CUT1 family low > 86
Pseudomonas fluorescens SBW25 0.21 PFLU_RS02835 Hsp70 family protein 0.15 PFLU_RS13400 sugar ABC transporter permease low > 109
Pseudomonas fluorescens FW300-N2E3 0.21 AO353_13470 heat-shock protein 0.15 AO353_25885 sugar ABC transporter permease low > 101
Pseudomonas fluorescens SBW25-INTG 0.21 PFLU_RS02835 Hsp70 family protein 0.15 PFLU_RS13400 sugar ABC transporter permease low > 109
Pseudomonas lactucae CFBP13502 0.21 GEMAOFIL_00789 Chaperone protein DnaK 0.15 GEMAOFIL_02790 Lactose transport system permease protein LacF
Pseudomonas simiae WCS417 0.21 PS417_02775 heat-shock protein 0.15 PS417_12710 ABC transporter for D-Mannitol and D-Sorbitol, permease component 2 (from data) low > 88
Pseudomonas fluorescens FW300-N1B4 0.21 Pf1N1B4_1359 Putative heat shock protein YegD 0.15 Pf1N1B4_4849 Various polyols ABC transporter, permease component 1 low > 87
Pseudomonas sp. DMC3 0.21 GFF3273 Chaperone protein DnaK 0.15 GFF2896 sn-glycerol-3-phosphate transport system permease protein UgpA low > 89
Pseudomonas fluorescens FW300-N2C3 0.20 AO356_08410 heat-shock protein 0.15 AO356_27675 sugar ABC transporter permease low > 104
Pseudomonas fluorescens GW456-L13 0.20 PfGW456L13_96 Putative heat shock protein YegD 0.15 PfGW456L13_3041 Various polyols ABC transporter, permease component 1 low > 87
Ralstonia solanacearum IBSBF1503 0.20 RALBFv3_RS12435 Hsp70 family protein 0.47 RALBFv3_RS15560 sn-glycerol-3-phosphate ABC transporter permease UgpA low > 76
Ralstonia solanacearum UW163 0.20 UW163_RS01135 Hsp70 family protein 0.47 UW163_RS13020 sn-glycerol-3-phosphate ABC transporter permease UgpA
Azospirillum brasilense Sp245 0.20 AZOBR_RS07090 heat-shock protein 0.50 AZOBR_RS00070 glycerol-3-phosphate transporter permease low > 97
Cupriavidus basilensis FW507-4G11 0.20 RR42_RS03720 heat-shock protein 0.49 RR42_RS12965 glycerol-3-phosphate transporter permease low > 128
Azospirillum sp. SherDot2 0.20 MPMX19_01253 Chaperone protein DnaK 0.47 MPMX19_00484 sn-glycerol-3-phosphate transport system permease protein UgpA low > 112
Pseudomonas fluorescens FW300-N2E2 0.20 Pf6N2E2_3559 Putative heat shock protein YegD 0.15 Pf6N2E2_809 Various polyols ABC transporter, permease component 1 low > 103
Pseudomonas sp. RS175 0.20 PFR28_05174 Chaperone protein DnaK 0.15 PFR28_01712 sn-glycerol-3-phosphate transport system permease protein UgpA low > 88
Ralstonia solanacearum PSI07 0.20 RPSI07_RS20885 Hsp70 family protein 0.48 RPSI07_RS17795 sn-glycerol-3-phosphate ABC transporter permease UgpA low > 81
Ralstonia solanacearum GMI1000 0.20 RS_RS03215 Hsp70 family protein 0.48 RS_RS06340 sn-glycerol-3-phosphate ABC transporter permease UgpA low > 80
Pseudomonas putida KT2440 0.20 PP_4849 putative DnaK protein 0.16 PP_1016 mannose/glucose ABC transporter, permease protein low > 96
Pseudomonas sp. BP01 0.19 JOY50_RS17475 Hsp70 family protein 0.16 JOY50_RS11420 carbohydrate ABC transporter permease low > 84
Ralstonia sp. UNC404CL21Col 0.19 ABZR87_RS03710 Hsp70 family protein 0.48 ABZR87_RS11090 sn-glycerol-3-phosphate ABC transporter permease UgpA low > 80
Pseudomonas aeruginosa PA14 0.19 IKLFDK_29185 heat-shock protein 0.14 IKLFDK_11455 sugar ABC transporter permease low > 98
Pseudomonas aeruginosa PUPa3 0.19 DQ20_RS51910 Hsp70 family protein 0.14 DQ20_RS59325 sugar ABC transporter permease low > 101
Pseudomonas aeruginosa MRSN321 0.19 DY961_RS10145 Hsp70 family protein 0.14 DY961_RS18090 sugar ABC transporter permease low > 100
Pseudomonas segetis P6 0.19 ACVTMO_RS20470 Hsp70 family protein 0.15 ACVTMO_RS14050 carbohydrate ABC transporter permease low > 75
Pseudomonas sp. S08-1 0.19 OH686_07790 Uncharacterized chaperone protein YegD 0.14 OH686_02465 Glucose ABC transport system, inner membrane component 1 low > 80
Acidovorax sp. GW101-3H11 0.18 Ac3H11_4465 Putative heat shock protein YegD 0.48 Ac3H11_4787 Glycerol-3-phosphate ABC transporter, permease protein UgpA (TC 3.A.1.1.3) low > 79
Xanthobacter sp. DMC5 0.18 GFF2154 Chaperone protein DnaK 0.46 GFF1486 sn-glycerol-3-phosphate transport system permease protein UgpA
Burkholderia phytofirmans PsJN 0.18 BPHYT_RS11050 molecular chaperone 0.47 BPHYT_RS17460 glycerol-3-phosphate transporter permease low > 109
Variovorax sp. OAS795 0.17 ABID97_RS08400 Hsp70 family protein 0.45 ABID97_RS07225 sn-glycerol-3-phosphate ABC transporter permease UgpA low > 91
Rhodospirillum rubrum S1H 0.17 Rru_A3761 hypothetical protein (NCBI) 0.20 Rru_A1261 Binding-protein-dependent transport systems inner membrane component (NCBI) low > 58
Variovorax sp. SCN45 0.17 GFF3877 Uncharacterized chaperone protein YegD 0.46 GFF2536 Glycerol-3-phosphate ABC transporter, permease protein UgpA (TC 3.A.1.1.3) low > 127
Pseudomonas stutzeri RCH2 0.17 Psest_1325 Molecular chaperone 0.15 Psest_1897 ABC-type sugar transport systems, permease components low > 67
Herbaspirillum seropedicae SmR1 0.16 HSERO_RS01480 heat-shock protein 0.50 HSERO_RS18950 glycerol-3-phosphate transporter permease low > 78
Paraburkholderia bryophila 376MFSha3.1 0.16 H281DRAFT_05685 hypothetical chaperone protein 0.48 H281DRAFT_05703 glycerol 3-phosphate ABC transporter membrane protein /carbohydrate ABC transporter membrane protein 1, CUT1 family low > 103
Paraburkholderia graminis OAS925 0.16 ABIE53_003670 putative chaperone protein 0.48 ABIE53_003652 sn-glycerol 3-phosphate transport system permease protein low > 113
Paraburkholderia sabiae LMG 24235 0.15 QEN71_RS27705 Hsp70 family protein 0.46 QEN71_RS27610 sn-glycerol-3-phosphate ABC transporter permease UgpA low > 153
Hydrogenophaga sp. GW460-11-11-14-LB1 0.15 GFF5704 Putative heat shock protein YegD 0.46 GFF1260 Glycerol-3-phosphate ABC transporter, permease protein UgpA (TC 3.A.1.1.3) low > 90
Agrobacterium fabrum C58 0.13 Atu0988 molecular chaperone, Hsp70 family 0.53 Atu0306 ABC transporter, membrane spanning protein (sn-Glycerol-3-phosphate) low > 89
Phaeobacter inhibens DSM 17395 0.12 PGA1_c12490 heat shock protein (HSP 70)-like protein 0.57 PGA1_c02720 sn-glycerol-3-phosphate transport system permease protein UgpA low > 62

Not shown: 11 genomes with orthologs for CSW01_06960 only; 18 genomes with orthologs for CSW01_07790 only