Conservation of cofitness between CSW01_10440 and CSW01_07495 in Vibrio cholerae E7946 ATCC 55056

59 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_10440 succinate dehydrogenase flavoprotein subunit 1.0 CSW01_07495 NAD-glutamate dehydrogenase 0.50 17
Alteromonas macleodii MIT1002 0.78 MIT1002_01946 Succinate dehydrogenase flavoprotein subunit 0.56 MIT1002_02034 NAD-specific glutamate dehydrogenase
Shewanella amazonensis SB2B 0.77 Sama_1425 sdhA succinate dehydrogenase flavoprotein subunit (RefSeq) 0.57 Sama_1592 hypothetical protein (RefSeq)
Shewanella oneidensis MR-1 0.76 SO1928 sdhA succinate dehydrogenase, flavoprotein subunit (NCBI ptt file) 0.57 SO2593 conserved hypothetical protein (NCBI ptt file)
Shewanella sp. ANA-3 0.76 Shewana3_1708 sdhA succinate dehydrogenase flavoprotein subunit (RefSeq) 0.57 Shewana3_1785 glutamate dehydrogenase (NAD) (RefSeq)
Shewanella loihica PV-4 0.75 Shew_1653 sdhA succinate dehydrogenase flavoprotein subunit (RefSeq) 0.58 Shew_1809 NAD-glutamate dehydrogenase (RefSeq)
Kangiella aquimarina DSM 16071 0.70 B158DRAFT_1422 succinate dehydrogenase subunit A (EC 1.3.5.1) 0.50 B158DRAFT_0998 NAD-specific glutamate dehydrogenase
Marinobacter adhaerens HP15 0.68 HP15_1519 succinate dehydrogenase flavoprotein subunit-like protein 0.44 HP15_2269 NAD-specific glutamate dehydrogenase
Pseudomonas aeruginosa PA14 0.66 IKLFDK_07580 succinate dehydrogenase flavoprotein subunit 0.44 IKLFDK_15595 NAD-specific glutamate dehydrogenase
Pseudomonas aeruginosa PUPa3 0.66 DQ20_RS53680 sdhA;go_function=oxidoreductase succinate dehydrogenase flavoprotein subunit 0.44 DQ20_RS33955 gdhB;inference=COORDINATES NAD-glutamate dehydrogenase GdhB
Pseudomonas aeruginosa MRSN321 0.66 DY961_RS19565 sdhA;go_function=oxidoreductase succinate dehydrogenase flavoprotein subunit 0.44 DY961_RS01605 gdhB;inference=COORDINATES NAD-glutamate dehydrogenase GdhB
Pseudomonas sp. S08-1 0.66 OH686_01980 succinate dehydrogenase, flavoprotein subunit 0.44 OH686_22265 NAD-specific glutamate dehydrogenase , large form
Pseudomonas syringae pv. syringae B728a 0.66 Psyr_2007 succinate dehydrogenase subunit A 0.43 Psyr_1724 glutamate dehydrogenase (NAD)
Pseudomonas syringae pv. syringae B728a ΔmexB 0.66 Psyr_2007 succinate dehydrogenase subunit A 0.43 Psyr_1724 glutamate dehydrogenase (NAD)
Pseudomonas segetis P6 0.65 ACVTMO_RS11660 sdhA succinate dehydrogenase flavoprotein subunit 0.44 ACVTMO_RS15010 NAD-glutamate dehydrogenase
Pseudomonas stutzeri RCH2 0.65 Psest_2496 succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup 0.43 Psest_1944 NAD-specific glutamate dehydrogenase (EC 1.4.1.2), large form (from data)
Pseudomonas fluorescens FW300-N2E2 0.64 Pf6N2E2_5853 Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) 0.43 Pf6N2E2_634 NAD-specific glutamate dehydrogenase (EC 1.4.1.2), large form
Pseudomonas sp. DMC3 0.64 GFF2518 Succinate dehydrogenase flavoprotein subunit 0.44 GFF3012 NAD-specific glutamate dehydrogenase
Pseudomonas lactucae CFBP13502 0.64 GEMAOFIL_01907 Succinate dehydrogenase flavoprotein subunit 0.43 GEMAOFIL_03315 NAD-specific glutamate dehydrogenase
Pseudomonas fluorescens FW300-N2E3 0.64 AO353_01845 succinate dehydrogenase 0.43 AO353_22820 NAD-glutamate dehydrogenase
Pseudomonas fluorescens FW300-N2C3 0.64 AO356_19685 succinate dehydrogenase 0.43 AO356_24705 NAD-glutamate dehydrogenase
Pseudomonas orientalis W4I3 0.64 QF045_RS11580 succinate dehydrogenase flavoprotein subunit 0.43 QF045_RS14460 NAD-glutamate dehydrogenase
Pseudomonas fluorescens FW300-N1B4 0.64 Pf1N1B4_3679 Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) 0.43 Pf1N1B4_4643 NAD-specific glutamate dehydrogenase (EC 1.4.1.2), large form
Pseudomonas sp. SVBP6 0.64 COO64_RS18885 sdhA succinate dehydrogenase flavoprotein subunit 0.42 COO64_RS05395 NAD-glutamate dehydrogenase
Pseudomonas simiae WCS417 0.64 PS417_08885 succinate dehydrogenase 0.43 PS417_15075 NAD-glutamate dehydrogenase
Pseudomonas fluorescens SBW25-INTG 0.64 PFLU_RS08945 succinate dehydrogenase flavoprotein subunit 0.43 PFLU_RS17095 NAD-glutamate dehydrogenase
Pseudomonas fluorescens SBW25 0.64 PFLU_RS08945 succinate dehydrogenase flavoprotein subunit 0.43 PFLU_RS17095 NAD-glutamate dehydrogenase
Pseudomonas fluorescens GW456-L13 0.63 PfGW456L13_4271 Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) 0.43 PfGW456L13_3298 NAD-specific glutamate dehydrogenase (EC 1.4.1.2), large form
Pseudomonas sp. RS175 0.63 PFR28_03098 Succinate dehydrogenase flavoprotein subunit 0.43 PFR28_01602 NAD-specific glutamate dehydrogenase
Pseudomonas putida KT2440 0.62 PP_4191 succinate dehydrogenase flavoprotein subunit 0.43 PP_2080 NAD-specific glutamate dehydrogenase
Pseudomonas sp. BP01 0.62 JOY50_RS19065 sdhA succinate dehydrogenase flavoprotein subunit 0.43 JOY50_RS22180 NAD-glutamate dehydrogenase
Cupriavidus basilensis FW507-4G11 0.57 RR42_RS14445 fumarate reductase 0.41 RR42_RS07270 NAD-glutamate dehydrogenase
Ralstonia sp. UNC404CL21Col 0.56 ABZR87_RS14560 succinate dehydrogenase flavoprotein subunit 0.42 ABZR87_RS22605 NAD-glutamate dehydrogenase
Ralstonia solanacearum PSI07 0.56 RPSI07_RS14675 succinate dehydrogenase flavoprotein subunit 0.41 RPSI07_RS18780 NAD-glutamate dehydrogenase
Ralstonia solanacearum UW163 0.56 UW163_RS11085 succinate dehydrogenase flavoprotein subunit 0.42 UW163_RS18785 NAD-glutamate dehydrogenase
Ralstonia solanacearum IBSBF1503 0.56 RALBFv3_RS02640 succinate dehydrogenase flavoprotein subunit 0.42 RALBFv3_RS20390 NAD-glutamate dehydrogenase
Burkholderia phytofirmans PsJN 0.55 BPHYT_RS33935 succinate dehydrogenase flavoprotein subunit 0.41 BPHYT_RS22475 NAD-glutamate dehydrogenase
Paraburkholderia graminis OAS925 0.55 ABIE53_004880 succinate dehydrogenase / fumarate reductase flavoprotein subunit 0.41 ABIE53_004113 glutamate dehydrogenase
Paraburkholderia sabiae LMG 24235 0.55 QEN71_RS38670 succinate dehydrogenase flavoprotein subunit 0.40 QEN71_RS20065 NAD-glutamate dehydrogenase
Sphingomonas koreensis DSMZ 15582 0.52 Ga0059261_1330 succinate dehydrogenase subunit A (EC 1.3.5.1) 0.27 Ga0059261_1252 NAD-specific glutamate dehydrogenase
Sphingobium sp. HT1-2 0.51 GFF477 Succinate dehydrogenase flavoprotein subunit (EC 1.3.5.1) 0.27 GFF207 NAD-specific glutamate dehydrogenase (EC 1.4.1.2), large form
Dyella japonica UNC79MFTsu3.2 0.51 ABZR86_RS06335 succinate dehydrogenase flavoprotein subunit 0.39 ABZR86_RS07560 NAD-glutamate dehydrogenase domain-containing protein
Rhodospirillum rubrum S1H 0.50 Rru_A1204 Succinate dehydrogenase flavoprotein subunit (NCBI) 0.39 Rru_A3663 NAD-glutamate dehydrogenase (NCBI)
Rhodanobacter denitrificans FW104-10B01 0.50 LRK54_RS07475 succinate dehydrogenase flavoprotein subunit 0.38 LRK54_RS02090 NAD-glutamate dehydrogenase low > 59
Rhodanobacter denitrificans MT42 0.50 LRK55_RS07215 succinate dehydrogenase flavoprotein subunit 0.38 LRK55_RS01865 NAD-glutamate dehydrogenase low > 63
Xanthomonas campestris pv. campestris strain 8004 0.49 Xcc-8004.2458.1 Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) 0.40 Xcc-8004.2182.1 NAD-specific glutamate dehydrogenase (EC 1.4.1.2), large form
Xanthobacter sp. DMC5 0.49 GFF2488 Succinate dehydrogenase flavoprotein subunit 0.33 GFF3560 NAD-specific glutamate dehydrogenase
Rhodanobacter sp000427505 FW510-R12 0.49 LRK53_RS12620 succinate dehydrogenase flavoprotein subunit 0.38 LRK53_RS07945 NAD-glutamate dehydrogenase
Brevundimonas sp. GW460-12-10-14-LB2 0.48 A4249_RS13430 succinate dehydrogenase flavoprotein subunit 0.33 A4249_RS13510 NAD-glutamate dehydrogenase
Rhodanobacter sp. FW510-T8 0.48 OKGIIK_08480 sdhA succinate dehydrogenase flavoprotein subunit 0.38 OKGIIK_09160 gdh2 NAD-specific glutamate dehydrogenase
Lysobacter sp. OAE881 0.48 ABIE51_RS12520 succinate dehydrogenase flavoprotein subunit 0.41 ABIE51_RS09105 NAD-glutamate dehydrogenase domain-containing protein
Azospirillum sp. SherDot2 0.48 MPMX19_02409 Succinate dehydrogenase flavoprotein subunit 0.40 MPMX19_04621 NAD-specific glutamate dehydrogenase
Bosea sp. OAE506 0.48 ABIE41_RS05745 succinate dehydrogenase flavoprotein subunit 0.33 ABIE41_RS04780 NAD-glutamate dehydrogenase
Magnetospirillum magneticum AMB-1 0.47 AMB_RS20000 succinate dehydrogenase flavoprotein subunit 0.40 AMB_RS00165 NAD-glutamate dehydrogenase
Rhizobium sp. OAE497 0.46 ABIE40_RS18020 succinate dehydrogenase flavoprotein subunit 0.31 ABIE40_RS19120 NAD-glutamate dehydrogenase
Caulobacter crescentus NA1000 0.46 CCNA_03642 succinate dehydrogenase flavoprotein subunit 0.33 CCNA_00086 NAD-specific glutamate dehydrogenase GdhZ
Caulobacter crescentus NA1000 Δfur 0.46 CCNA_03642 succinate dehydrogenase flavoprotein subunit 0.33 CCNA_00086 NAD-specific glutamate dehydrogenase GdhZ
Agrobacterium fabrum C58 0.46 Atu2643 succinate dehydrogenase flavoprotein subunit 0.30 Atu2766 NAD-glutamate dehydrogenase
Sinorhizobium meliloti 1021 0.45 SMc02465 succinate dehydrogenase flavoprotein subunit 0.32 SMc04085 hypothetical protein
Mycobacterium tuberculosis H37Rv 0.42 Rv3318 Probable succinate dehydrogenase (flavoprotein subunit) SdhA (succinic dehydrogenase) (fumarate reductase) (fumarate dehydrogenase) (fumaric hydrogenase) 0.31 Rv2476c Probable NAD-dependent glutamate dehydrogenase Gdh (NAD-Gdh) (NAD-dependent glutamic dehydrogenase) low > 58

Not shown: 45 genomes with orthologs for CSW01_10440 only; 2 genomes with orthologs for CSW01_07495 only