Conservation of cofitness between CSW01_03340 and CSW01_07195 in Vibrio cholerae E7946 ATCC 55056

37 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_03340 ribosomal RNA large subunit methyltransferase E 1.0 CSW01_07195 cytochrome biogenesis protein 0.47 5
Shewanella amazonensis SB2B 0.77 Sama_0953 rrmJ 23S rRNA methyltransferase J (RefSeq) 0.37 Sama_1798 hypothetical protein (RefSeq) low > 62
Shewanella loihica PV-4 0.77 Shew_2835 rrmJ 23S rRNA methyltransferase J (RefSeq) 0.42 Shew_1992 hypothetical protein (RefSeq) — —
Shewanella sp. ANA-3 0.77 Shewana3_1022 rrmJ 23S rRNA methyltransferase J (RefSeq) 0.46 Shewana3_2114 hypothetical protein (RefSeq) — —
Shewanella oneidensis MR-1 0.76 SO1196 rrmJ ribosomal RNA large subunit methyltransferase J (NCBI ptt file) 0.45 SO2357 conserved hypothetical protein (NCBI ptt file) low > 76
Alteromonas macleodii MIT1002 0.74 MIT1002_01864 Ribosomal RNA large subunit methyltransferase E 0.35 MIT1002_02136 hypothetical protein low > 70
Kangiella aquimarina DSM 16071 0.62 B158DRAFT_0634 23S rRNA Um-2552 2'-O-methyltransferase (EC 2.1.1.166) 0.31 B158DRAFT_1974 Uncharacterized conserved protein low > 40
Marinobacter adhaerens HP15 0.61 HP15_3615 ribosomal RNA large subunit methyltransferase J 0.32 HP15_2115 conserved hypothetical protein, membrane — —
Pseudomonas aeruginosa PUPa3 0.60 DQ20_RS52520 rlmE;go_function=rRNA 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE 0.28 DQ20_RS53490 sulfite exporter TauE/SafE family protein — —
Pseudomonas aeruginosa PA14 0.60 IKLFDK_29835 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE 0.28 IKLFDK_07390 cytochrome biogenesis protein — —
Pseudomonas aeruginosa MRSN321 0.60 DY961_RS09515 rlmE;go_function=rRNA 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE 0.28 DY961_RS19360 sulfite exporter TauE/SafE family protein — —
Pseudomonas syringae pv. syringae B728a 0.60 Psyr_4188 23S rRNA Um-2552 2'-O-methyltransferase 0.28 Psyr_3422 membrane protein, putative — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.60 Psyr_4188 23S rRNA Um-2552 2'-O-methyltransferase 0.28 Psyr_3422 membrane protein, putative — —
Pseudomonas segetis P6 0.59 ACVTMO_RS05905 rlmE 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE 0.30 ACVTMO_RS11470 sulfite exporter TauE/SafE family protein — —
Dyella japonica UNC79MFTsu3.2 0.59 ABZR86_RS06565 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE 0.24 ABZR86_RS04415 sulfite exporter TauE/SafE family protein — —
Pseudomonas simiae WCS417 0.59 PS417_24020 23S rRNA methyltransferase 0.25 PS417_20770 cytochrome biogenesis protein — —
Pseudomonas lactucae CFBP13502 0.59 GEMAOFIL_04954 Ribosomal RNA large subunit methyltransferase E 0.27 GEMAOFIL_04299 hypothetical protein — —
Pseudomonas sp. RS175 0.59 PFR28_00081 Ribosomal RNA large subunit methyltransferase E 0.26 PFR28_01081 hypothetical protein — —
Pseudomonas fluorescens FW300-N2E2 0.59 Pf6N2E2_3360 Heat shock protein FtsJ/RrmJ @ Ribosomal RNA large subunit methyltransferase E (EC 2.1.1.-) 0.27 Pf6N2E2_2320 Heavy-metal-associated domain (N-terminus) and membrane-bounded cytochrome biogenesis cycZ-like domain, possible membrane copper tolerance protein — —
Pseudomonas fluorescens FW300-N2C3 0.59 AO356_07460 23S rRNA methyltransferase 0.27 AO356_02475 cytochrome biogenesis protein — —
Pseudomonas fluorescens FW300-N2E3 0.59 AO353_05610 23S rRNA methyltransferase 0.27 AO353_00650 cytochrome biogenesis protein — —
Pseudomonas orientalis W4I3 0.59 QF045_RS26275 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE 0.27 QF045_RS22575 sulfite exporter TauE/SafE family protein — —
Pseudomonas fluorescens SBW25 0.58 PFLU_RS25860 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE 0.25 PFLU_RS22380 sulfite exporter TauE/SafE family protein — —
Pseudomonas fluorescens SBW25-INTG 0.58 PFLU_RS25860 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE 0.25 PFLU_RS22380 sulfite exporter TauE/SafE family protein — —
Pseudomonas putida KT2440 0.58 PP_4719 Ribosomal RNA large subunit methyltransferase E 0.22 PP_4263 putative membrane-bounded cytochrome biogenesis cycZ-like domain, copper tolerance protein — —
Pseudomonas sp. BP01 0.58 JOY50_RS26785 rlmE 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE 0.24 JOY50_RS00115 sulfite exporter TauE/SafE family protein — —
Pseudomonas fluorescens GW456-L13 0.57 PfGW456L13_5095 Heat shock protein FtsJ/RrmJ @ Ribosomal RNA large subunit methyltransferase E (EC 2.1.1.-) 0.27 PfGW456L13_4069 Heavy-metal-associated domain (N-terminus) and membrane-bounded cytochrome biogenesis cycZ-like domain, possible membrane copper tolerance protein — —
Pseudomonas sp. S08-1 0.57 OH686_23800 23S rRNA (uridine(2552)-2'-O)-methyltransferase 0.32 OH686_02230 Heavy-metal-associated domain (N-terminus) and membrane-bounded cytochrome biogenesis cycZ-like domain, putative membrane copper tolerance protein — —
Pseudomonas sp. SVBP6 0.56 COO64_RS15220 rlmE 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE 0.24 COO64_RS18650 sulfite exporter TauE/SafE family protein — —
Pseudomonas fluorescens FW300-N1B4 0.56 Pf1N1B4_1168 Heat shock protein FtsJ/RrmJ @ Ribosomal RNA large subunit methyltransferase E (EC 2.1.1.-) 0.27 Pf1N1B4_3869 Heavy-metal-associated domain (N-terminus) and membrane-bounded cytochrome biogenesis cycZ-like domain, possible membrane copper tolerance protein — —
Pseudomonas sp. DMC3 0.56 GFF4981 Ribosomal RNA large subunit methyltransferase E 0.27 GFF714 hypothetical protein — —
Pseudomonas stutzeri RCH2 0.56 Psest_1346 23S rRNA methylase 0.26 Psest_2535 Uncharacterized conserved protein — —
Dechlorosoma suillum PS 0.54 Dsui_3060 23S rRNA methylase 0.28 Dsui_1648 hypothetical protein — —
Lysobacter sp. OAE881 0.52 ABIE51_RS06520 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE 0.21 ABIE51_RS03810 sulfite exporter TauE/SafE family protein — —
Cupriavidus basilensis FW507-4G11 0.43 RR42_RS13490 ribosomal RNA large subunit methyltransferase E 0.12 RR42_RS12870 membrane protein — —
Azospirillum sp. SherDot2 0.43 MPMX19_01691 Ribosomal RNA large subunit methyltransferase E 0.16 MPMX19_02424 hypothetical protein — —
Azospirillum brasilense Sp245 0.42 AZOBR_RS16115 23S rRNA methyltransferase 0.13 AZOBR_RS02895 membrane protein — —
Herbaspirillum seropedicae SmR1 0.38 HSERO_RS06940 23S rRNA methyltransferase 0.23 HSERO_RS16070 cytochrome biogenesis protein low > 78

Not shown: 67 genomes with orthologs for CSW01_03340 only; 1 genomes with orthologs for CSW01_07195 only