Conservation of cofitness between CSW01_12685 and CSW01_06790 in Vibrio cholerae E7946 ATCC 55056

35 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_12685 DNA polymerase III subunit chi 1.0 CSW01_06790 maleylacetoacetate isomerase 0.63 19
Klebsiella michiganensis M5al 0.37 BWI76_RS03035 DNA polymerase III subunit chi 0.45 BWI76_RS19575 maleylacetoacetate isomerase — —
Escherichia coli ECRC101 0.36 MCAODC_02315 holC DNA polymerase III subunit chi 0.42 MCAODC_14655 maiA maleylacetoacetate isomerase low > 88
Escherichia coli ECRC100 0.36 OKFHMN_11810 holC DNA polymerase III subunit chi 0.42 OKFHMN_23605 maiA maleylacetoacetate isomerase low > 79
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.36 GFF948 DNA polymerase III chi subunit (EC 2.7.7.7) 0.41 GFF3802 Maleylacetoacetate isomerase (EC 5.2.1.2) @ Glutathione S-transferase, zeta (EC 2.5.1.18) low > 78
Escherichia coli ECRC98 0.36 JDDGAC_15450 holC DNA polymerase III subunit chi 0.42 JDDGAC_27560 maiA maleylacetoacetate isomerase low > 87
Escherichia coli ECRC99 0.36 KEDOAH_16345 holC DNA polymerase III subunit chi 0.42 KEDOAH_04580 maiA maleylacetoacetate isomerase — —
Escherichia coli ECRC62 0.36 BNILDI_07450 holC DNA polymerase III subunit chi 0.42 BNILDI_14095 maiA maleylacetoacetate isomerase low > 75
Escherichia coli ECRC102 0.36 NIAGMN_09660 holC DNA polymerase III subunit chi 0.42 NIAGMN_21370 maiA maleylacetoacetate isomerase low > 80
Shewanella oneidensis MR-1 0.35 SO3423 holC DNA polymerase III, chi subunit (NCBI ptt file) 0.57 SO1671 Maleylacetoacetate isomerase (EC 5.2.1.2) (from data) low > 76
Shewanella sp. ANA-3 0.35 Shewana3_1132 DNA polymerase III chi subunit, HolC (RefSeq) 0.57 Shewana3_2777 maleylacetoacetate isomerase (RefSeq) — —
Shewanella loihica PV-4 0.35 Shew_0924 DNA polymerase III chi subunit, HolC (RefSeq) 0.53 Shew_1439 maleylacetoacetate isomerase (RefSeq) — —
Shewanella amazonensis SB2B 0.30 Sama_0791 DNA polymerase III, chi subunit (RefSeq) 0.52 Sama_2218 maleylacetoacetate isomerase (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.29 MIT1002_03196 DNA polymerase III subunit chi 0.53 MIT1002_01149 Maleylpyruvate isomerase — —
Kangiella aquimarina DSM 16071 0.26 B158DRAFT_1166 DNA polymerase III, chi subunit (EC 2.7.7.7) 0.48 B158DRAFT_1449 maleylacetoacetate isomerase — —
Pseudomonas aeruginosa PA14 0.23 IKLFDK_19735 DNA polymerase III subunit chi 0.38 IKLFDK_12145 maleylacetoacetate isomerase low > 100
Pseudomonas sp. BP01 0.22 JOY50_RS11260 DNA polymerase III subunit chi 0.37 JOY50_RS15545 maiA maleylacetoacetate isomerase low > 84
Pseudomonas fluorescens FW300-N2E3 0.22 AO353_04540 DNA polymerase III subunit chi 0.33 AO353_15560 Maleylacetoacetate isomerase (EC 5.2.1.2) (from data) — —
Pseudomonas sp. RS175 0.21 PFR28_03529 DNA polymerase III subunit chi 0.29 PFR28_00223 Maleylpyruvate isomerase low > 88
Pseudomonas sp. SVBP6 0.21 COO64_RS04410 DNA polymerase III subunit chi 0.37 COO64_RS03645 maiA maleylacetoacetate isomerase low > 93
Pseudomonas simiae WCS417 0.21 PS417_05160 DNA polymerase III subunit chi 0.31 PS417_05025 maleylacetoacetate isomerase low > 88
Pseudomonas fluorescens SBW25 0.21 PFLU_RS05230 DNA polymerase III subunit chi 0.29 PFLU_RS05095 maleylacetoacetate isomerase low > 109
Pseudomonas fluorescens SBW25-INTG 0.21 PFLU_RS05230 DNA polymerase III subunit chi 0.29 PFLU_RS05095 maleylacetoacetate isomerase low > 109
Pseudomonas stutzeri RCH2 0.20 Psest_1234 DNA polymerase III, chi subunit 0.55 Psest_3511 Maleylacetoacetate isomerase (EC 5.2.1.2) (from data) — —
Pseudomonas putida KT2440 0.20 PP_0979 DNA polymerase III subunit chi 0.33 PP_4619 Maleylacetoacetate isomerase low > 96
Pseudomonas lactucae CFBP13502 0.20 GEMAOFIL_01238 DNA polymerase III subunit chi 0.31 GEMAOFIL_01212 Maleylpyruvate isomerase low > 93
Pseudomonas fluorescens FW300-N2E2 0.20 Pf6N2E2_5419 DNA polymerase III chi subunit (EC 2.7.7.7) 0.32 Pf6N2E2_5292 Maleylacetoacetate isomerase (EC 5.2.1.2) (from data) low > 103
Pseudomonas fluorescens FW300-N1B4 0.20 Pf1N1B4_899 DNA polymerase III chi subunit (EC 2.7.7.7) 0.33 Pf1N1B4_1023 Maleylacetoacetate isomerase (EC 5.2.1.2) @ Glutathione S-transferase, zeta (EC 2.5.1.18) low > 87
Pseudomonas fluorescens GW456-L13 0.20 PfGW456L13_4847 DNA polymerase III chi subunit (EC 2.7.7.7) 0.32 PfGW456L13_4960 Maleylacetoacetate isomerase (EC 5.2.1.2) @ Glutathione S-transferase, zeta (EC 2.5.1.18) low > 87
Pseudomonas sp. DMC3 0.20 GFF1951 DNA polymerase III subunit chi 0.33 GFF1878 Maleylpyruvate isomerase low > 89
Acinetobacter radioresistens SK82 0.20 MPMX26_00156 hypothetical protein 0.51 MPMX26_02378 Maleylpyruvate isomerase low > 36
Pseudomonas fluorescens FW300-N2C3 0.20 AO356_17465 DNA polymerase III subunit chi 0.32 AO356_16835 Maleylacetoacetate isomerase (EC 5.2.1.2) (from data) low > 104
Lysobacter sp. OAE881 0.18 ABIE51_RS04470 DNA polymerase III subunit chi 0.54 ABIE51_RS04250 maleylacetoacetate isomerase — —
Acinetobacter baumannii LAC-4 0.18 RR41_RS17830 DNA polymerase III subunit chi 0.53 RR41_RS00340 maleylacetoacetate isomerase low > 55
Pseudomonas sp. S08-1 0.17 OH686_07815 DNA polymerase III chi subunit 0.53 OH686_21095 maleylacetoacetate isomerase low > 80
Pseudomonas segetis P6 0.17 MPMX49_03517 DNA polymerase III subunit chi 0.54 MPMX49_02853 Maleylpyruvate isomerase — —

Not shown: 23 genomes with orthologs for CSW01_12685 only; 33 genomes with orthologs for CSW01_06790 only