Conservation of cofitness between CSW01_03145 and CSW01_06790 in Vibrio cholerae E7946 ATCC 55056

55 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_03145 polynucleotide adenylyltransferase PcnB 1.0 CSW01_06790 maleylacetoacetate isomerase 0.51 18
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.57 GFF89 Poly(A) polymerase (EC 2.7.7.19) 0.41 GFF3802 Maleylacetoacetate isomerase (EC 5.2.1.2) @ Glutathione S-transferase, zeta (EC 2.5.1.18) low > 78
Klebsiella michiganensis M5al 0.56 BWI76_RS05005 polynucleotide adenylyltransferase 0.45 BWI76_RS19575 maleylacetoacetate isomerase low > 92
Escherichia coli ECRC102 0.56 NIAGMN_08205 pcnB polynucleotide adenylyltransferase PcnB 0.42 NIAGMN_21370 maiA maleylacetoacetate isomerase low > 80
Escherichia coli ECRC98 0.56 JDDGAC_13950 pcnB polynucleotide adenylyltransferase PcnB 0.42 JDDGAC_27560 maiA maleylacetoacetate isomerase low > 87
Escherichia coli ECRC101 0.56 MCAODC_00870 pcnB polynucleotide adenylyltransferase PcnB 0.42 MCAODC_14655 maiA maleylacetoacetate isomerase low > 87
Escherichia coli ECRC100 0.56 OKFHMN_10355 pcnB polynucleotide adenylyltransferase PcnB 0.42 OKFHMN_23605 maiA maleylacetoacetate isomerase low > 79
Escherichia coli ECRC99 0.56 KEDOAH_17800 pcnB polynucleotide adenylyltransferase PcnB 0.42 KEDOAH_04580 maiA maleylacetoacetate isomerase — —
Escherichia coli ECRC62 0.56 BNILDI_08970 pcnB polynucleotide adenylyltransferase PcnB 0.42 BNILDI_14095 maiA maleylacetoacetate isomerase low > 75
Alteromonas macleodii MIT1002 0.52 MIT1002_03692 Poly(A) polymerase I precursor 0.53 MIT1002_01149 Maleylpyruvate isomerase low > 70
Shewanella oneidensis MR-1 0.52 SO0872 pcnB polyA polymerase (NCBI ptt file) 0.57 SO1671 Maleylacetoacetate isomerase (EC 5.2.1.2) (from data) low > 76
Shewanella loihica PV-4 0.52 Shew_3131 poly(A) polymerase (RefSeq) 0.53 Shew_1439 maleylacetoacetate isomerase (RefSeq) low > 60
Shewanella sp. ANA-3 0.52 Shewana3_3406 poly(A) polymerase (RefSeq) 0.57 Shewana3_2777 maleylacetoacetate isomerase (RefSeq) low > 73
Shewanella amazonensis SB2B 0.50 Sama_0778 tRNA nucleotidyltransferase (CCA-adding enzyme) (RefSeq) 0.52 Sama_2218 maleylacetoacetate isomerase (RefSeq) low > 62
Kangiella aquimarina DSM 16071 0.48 B158DRAFT_0058 poly(A) polymerase 0.48 B158DRAFT_1449 maleylacetoacetate isomerase — —
Pseudomonas sp. SVBP6 0.46 COO64_RS15095 polynucleotide adenylyltransferase PcnB 0.37 COO64_RS03645 maiA maleylacetoacetate isomerase low > 93
Pseudomonas sp. DMC3 0.45 GFF4029 Poly(A) polymerase I 0.33 GFF1878 Maleylpyruvate isomerase low > 89
Pseudomonas putida KT2440 0.45 PP_4697 poly(A) polymerase 0.33 PP_4619 Maleylacetoacetate isomerase low > 96
Pseudomonas sp. BP01 0.45 JOY50_RS27670 polynucleotide adenylyltransferase PcnB 0.37 JOY50_RS15545 maiA maleylacetoacetate isomerase 0.30 56
Pseudomonas lactucae CFBP13502 0.45 GEMAOFIL_04931 Poly(A) polymerase I 0.31 GEMAOFIL_01212 Maleylpyruvate isomerase low > 96
Pseudomonas simiae WCS417 0.45 PS417_23900 poly(A) polymerase 0.31 PS417_05025 maleylacetoacetate isomerase low > 88
Pseudomonas sp. RS175 0.45 PFR28_03719 Poly(A) polymerase I 0.29 PFR28_00223 Maleylpyruvate isomerase low > 88
Pseudomonas segetis P6 0.45 MPMX49_01223 Poly(A) polymerase I 0.54 MPMX49_02853 Maleylpyruvate isomerase low > 75
Pseudomonas fluorescens SBW25-INTG 0.44 PFLU_RS25740 polynucleotide adenylyltransferase PcnB 0.29 PFLU_RS05095 maleylacetoacetate isomerase low > 109
Pseudomonas fluorescens FW300-N2E3 0.44 AO353_14395 poly(A) polymerase 0.33 AO353_15560 Maleylacetoacetate isomerase (EC 5.2.1.2) (from data) low > 101
Pseudomonas fluorescens SBW25 0.44 PFLU_RS25740 polynucleotide adenylyltransferase PcnB 0.29 PFLU_RS05095 maleylacetoacetate isomerase low > 109
Pseudomonas sp. S08-1 0.44 OH686_17255 Poly(A) polymerase 0.53 OH686_21095 maleylacetoacetate isomerase low > 80
Pseudomonas aeruginosa MRSN321 0.44 DY961_RS09375 polynucleotide adenylyltransferase PcnB 0.37 DY961_RS05290 maiA;go_function=maleylacetoacetate maleylacetoacetate isomerase low > 100
Pseudomonas aeruginosa PUPa3 0.44 DQ20_RS52655 polynucleotide adenylyltransferase PcnB 0.37 DQ20_RS55415 maiA;go_function=maleylacetoacetate maleylacetoacetate isomerase low > 101
Pseudomonas orientalis W4I3 0.44 QF045_RS26160 polynucleotide adenylyltransferase PcnB 0.33 QF045_RS08005 maleylacetoacetate isomerase low > 93
Pseudomonas fluorescens GW456-L13 0.44 PfGW456L13_1523 Poly(A) polymerase (EC 2.7.7.19) 0.32 PfGW456L13_4960 Maleylacetoacetate isomerase (EC 5.2.1.2) @ Glutathione S-transferase, zeta (EC 2.5.1.18) low > 87
Pseudomonas aeruginosa PA14 0.44 IKLFDK_29965 polynucleotide adenylyltransferase PcnB 0.38 IKLFDK_12145 maleylacetoacetate isomerase low > 98
Pseudomonas fluorescens FW300-N2E2 0.44 Pf6N2E2_5155 Poly(A) polymerase (EC 2.7.7.19) 0.32 Pf6N2E2_5292 Maleylacetoacetate isomerase (EC 5.2.1.2) (from data) low > 103
Pseudomonas fluorescens FW300-N2C3 0.44 AO356_16070 poly(A) polymerase 0.32 AO356_16835 Maleylacetoacetate isomerase (EC 5.2.1.2) (from data) low > 104
Pseudomonas fluorescens FW300-N1B4 0.44 Pf1N1B4_2856 Poly(A) polymerase (EC 2.7.7.19) 0.33 Pf1N1B4_1023 Maleylacetoacetate isomerase (EC 5.2.1.2) @ Glutathione S-transferase, zeta (EC 2.5.1.18) low > 87
Dyella japonica UNC79MFTsu3.2 0.43 ABZR86_RS00805 polynucleotide adenylyltransferase PcnB 0.54 ABZR86_RS18680 maleylacetoacetate isomerase low > 74
Lysobacter sp. OAE881 0.43 ABIE51_RS08015 polynucleotide adenylyltransferase PcnB 0.54 ABIE51_RS04250 maleylacetoacetate isomerase low > 62
Rhodanobacter sp. FW510-T8 0.43 OKGIIK_03875 pcnB tRNA nucleotidyltransferase/poly(A) polymerase 0.50 OKGIIK_01115 maiA maleylacetoacetate isomerase low > 53
Rhodanobacter sp000427505 FW510-R12 0.42 LRK53_RS13510 polynucleotide adenylyltransferase PcnB 0.52 LRK53_RS04290 maleylacetoacetate isomerase low > 59
Rhodanobacter denitrificans MT42 0.42 LRK55_RS14820 polynucleotide adenylyltransferase PcnB 0.52 LRK55_RS05490 maleylacetoacetate isomerase low > 63
Xanthomonas campestris pv. campestris strain 8004 0.42 Xcc-8004.3054.1 Poly(A) polymerase (EC 2.7.7.19) 0.43 Xcc-8004.4525.1 Maleylacetoacetate isomerase (EC 5.2.1.2) @ Glutathione S-transferase, zeta (EC 2.5.1.18) low > 74
Rhodanobacter denitrificans FW104-10B01 0.42 LRK54_RS15105 polynucleotide adenylyltransferase PcnB 0.52 LRK54_RS05735 maleylacetoacetate isomerase low > 59
Pseudomonas stutzeri RCH2 0.41 Psest_0998 poly(A) polymerase 0.55 Psest_3511 Maleylacetoacetate isomerase (EC 5.2.1.2) (from data) low > 67
Ralstonia sp. UNC404CL21Col 0.39 ABZR87_RS00935 polynucleotide adenylyltransferase PcnB 0.50 ABZR87_RS06920 maleylacetoacetate isomerase low > 80
Ralstonia solanacearum IBSBF1503 0.38 RALBFv3_RS05300 polynucleotide adenylyltransferase PcnB 0.48 RALBFv3_RS11050 maleylacetoacetate isomerase low > 76
Ralstonia solanacearum PSI07 0.38 RPSI07_RS12000 polynucleotide adenylyltransferase PcnB 0.49 RPSI07_RS22255 maleylacetoacetate isomerase low > 81
Ralstonia solanacearum GMI1000 0.38 RS_RS13165 polynucleotide adenylyltransferase PcnB 0.48 RS_RS01895 maleylacetoacetate isomerase low > 80
Cupriavidus basilensis FW507-4G11 0.37 RR42_RS17235 poly(A) polymerase 0.52 RR42_RS01970 maleylacetoacetate isomerase low > 128
Castellaniella sp019104865 MT123 0.37 ABCV34_RS08810 polynucleotide adenylyltransferase PcnB 0.50 ABCV34_RS13685 maleylacetoacetate isomerase low > 48
Paraburkholderia sabiae LMG 24235 0.36 QEN71_RS26465 polynucleotide adenylyltransferase PcnB 0.52 QEN71_RS01655 maleylacetoacetate isomerase low > 153
Paraburkholderia bryophila 376MFSha3.1 0.36 H281DRAFT_04706 poly(A) polymerase 0.52 H281DRAFT_01970 maleylacetoacetate isomerase (EC 5.2.1.2) low > 103
Burkholderia phytofirmans PsJN 0.36 BPHYT_RS03620 poly(A) polymerase 0.51 BPHYT_RS02805 maleylacetoacetate isomerase low > 109
Paraburkholderia graminis OAS925 0.35 ABIE53_000870 poly(A) polymerase 0.51 ABIE53_000699 maleylpyruvate isomerase low > 113
Hydrogenophaga sp. GW460-11-11-14-LB1 0.33 GFF3438 Poly(A) polymerase (EC 2.7.7.19) 0.41 GFF4799 Maleylacetoacetate isomerase (EC 5.2.1.2) @ Glutathione S-transferase, zeta (EC 2.5.1.18) — —
Variovorax sp. OAS795 0.32 ABID97_RS08710 polynucleotide adenylyltransferase PcnB 0.41 ABID97_RS12400 maleylacetoacetate isomerase low > 91
Acinetobacter baumannii LAC-4 0.28 RR41_RS16060 polynucleotide adenylyltransferase PcnB 0.53 RR41_RS00340 maleylacetoacetate isomerase low > 55

Not shown: 25 genomes with orthologs for CSW01_03145 only; 16 genomes with orthologs for CSW01_06790 only