Conservation of cofitness between CSW01_06265 and CSW01_06565 in Vibrio cholerae E7946 ATCC 55056

61 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_06265 adenosylcobinamide-GDP ribazoletransferase 1.0 CSW01_06565 L-serine ammonia-lyase 0.49 6
Shewanella loihica PV-4 0.43 Shew_0715 cobalamin 5'-phosphate synthase (RefSeq) 0.70 Shew_0740 L-serine dehydratase 1 (RefSeq) low > 60
Shewanella amazonensis SB2B 0.40 Sama_0763 cobalamin 5'-phosphate synthase (RefSeq) 0.65 Sama_2771 L-serine ammonia-lyase (RefSeq) low > 62
Shewanella oneidensis MR-1 0.38 SO1036 cobS cobalamin 5'-phosphate synthase (NCBI ptt file) 0.55 SO2248 sdaA L-serine dehydratase 1 (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.36 Shewana3_3277 cobS cobalamin synthase (RefSeq) 0.55 Shewana3_2295 L-serine ammonia-lyase (RefSeq) low > 73
Paraburkholderia sabiae LMG 24235 0.35 QEN71_RS25125 adenosylcobinamide-GDP ribazoletransferase 0.50 QEN71_RS29225 L-serine ammonia-lyase low > 153
Ralstonia sp. UNC404CL21Col 0.34 ABZR87_RS00070 adenosylcobinamide-GDP ribazoletransferase 0.49 ABZR87_RS03940 L-serine ammonia-lyase low > 80
Burkholderia phytofirmans PsJN 0.34 BPHYT_RS04870 cobalamin synthase 0.49 BPHYT_RS19340 L-serine ammonia-lyase (EC 4.3.1.17) (from data) low > 109
Paraburkholderia bryophila 376MFSha3.1 0.33 H281DRAFT_00140 cobalamin-5'-phosphate synthase 0.49 H281DRAFT_02407 L-serine ammonia-lyase low > 103
Ralstonia solanacearum PSI07 0.33 RPSI07_RS12895 adenosylcobinamide-GDP ribazoletransferase 0.50 RPSI07_RS08570 L-serine ammonia-lyase low > 81
Ralstonia solanacearum GMI1000 0.32 RS_RS12030 adenosylcobinamide-GDP ribazoletransferase 0.49 RS_RS17410 L-serine ammonia-lyase low > 80
Ralstonia solanacearum UW163 0.31 UW163_RS09195 adenosylcobinamide-GDP ribazoletransferase 0.49 UW163_RS04945 L-serine ammonia-lyase — —
Ralstonia solanacearum IBSBF1503 0.31 RALBFv3_RS04475 adenosylcobinamide-GDP ribazoletransferase 0.49 RALBFv3_RS08665 L-serine ammonia-lyase low > 76
Cupriavidus basilensis FW507-4G11 0.31 RR42_RS16115 cobalamin synthase 0.48 RR42_RS20080 L-serine ammonia-lyase (EC 4.3.1.17) (from data) low > 128
Acidovorax sp. GW101-3H11 0.24 Ac3H11_2041 Cobalamin synthase 0.50 Ac3H11_929 L-serine ammonia-lyase (EC 4.3.1.17) (from data) low > 79
Bacteroides ovatus ATCC 8483 0.24 BACOVA_03274 cobalamin-5-phosphate synthase 0.30 BACOVA_05536 L-serine ammonia-lyase low > 96
Escherichia coli BL21 0.22 ECD_01901 cobalamin synthase 0.77 ECD_01784 L-serine dehydratase 1 low > 61
Escherichia coli BW25113 0.22 b1992 cobS cobalamin synthase (NCBI) 0.77 b1814 sdaA L-serine deaminase I (NCBI) low > 76
Escherichia coli ECRC100 0.22 OKFHMN_25130 cobS adenosylcobinamide-GDP ribazoletransferase 0.77 OKFHMN_26550 sdaA L-serine ammonia-lyase low > 79
Escherichia coli ECRC101 0.22 MCAODC_20260 cobS adenosylcobinamide-GDP ribazoletransferase 0.77 MCAODC_18860 sdaA L-serine ammonia-lyase low > 87
Escherichia coli ECRC102 0.22 NIAGMN_22635 cobS adenosylcobinamide-GDP ribazoletransferase 0.77 NIAGMN_01515 sdaA L-serine ammonia-lyase low > 80
Escherichia coli ECRC98 0.22 JDDGAC_29260 cobS adenosylcobinamide-GDP ribazoletransferase 0.77 JDDGAC_01125 sdaA L-serine ammonia-lyase low > 87
Escherichia coli ECRC62 0.22 BNILDI_14870 cobS adenosylcobinamide-GDP ribazoletransferase 0.77 BNILDI_15855 sdaA L-serine ammonia-lyase low > 75
Escherichia coli ECRC99 0.22 KEDOAH_02980 cobS adenosylcobinamide-GDP ribazoletransferase 0.77 KEDOAH_01560 sdaA L-serine ammonia-lyase — —
Phocaeicola vulgatus CL09T03C04 0.21 HMPREF1058_RS01280 adenosylcobinamide-GDP ribazoletransferase 0.31 HMPREF1058_RS16410 L-serine ammonia-lyase low > 67
Escherichia coli HS(pFamp)R (ATCC 700891) 0.21 OHPLBJKB_01716 Adenosylcobinamide-GDP ribazoletransferase 0.77 OHPLBJKB_01917 L-serine dehydratase 1 low > 74
Escherichia coli ECOR27 0.21 NOLOHH_16040 cobS adenosylcobinamide-GDP ribazoletransferase 0.77 NOLOHH_17070 sdaA L-serine ammonia-lyase low > 76
Escherichia coli ECOR38 0.21 HEPCGN_03465 cobS adenosylcobinamide-GDP ribazoletransferase 0.77 HEPCGN_04940 sdaA L-serine ammonia-lyase low > 88
Escherichia coli Nissle 1917 0.21 ECOLIN_RS11625 adenosylcobinamide-GDP ribazoletransferase 0.77 ECOLIN_RS10090 L-serine ammonia-lyase — —
Escherichia fergusonii Becca 0.21 EFB2_01897 Adenosylcobinamide-GDP ribazoletransferase 0.77 EFB2_02186 L-serine dehydratase 1 low > 86
Parabacteroides merdae CL09T00C40 0.21 HMPREF1078_RS17675 adenosylcobinamide-GDP ribazoletransferase 0.28 HMPREF1078_RS01410 L-serine ammonia-lyase low > 61
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.20 GFF3968 Cobalamin synthase (EC 2.7.8.26) 0.72 GFF2828 L-serine dehydratase, beta subunit (EC 4.3.1.17) / L-serine dehydratase, alpha subunit (EC 4.3.1.17) 0.38 25
Bacteroides stercoris CC31F 0.20 HMPREF1181_RS15660 adenosylcobinamide-GDP ribazoletransferase 0.29 HMPREF1181_RS11755 L-serine ammonia-lyase low > 56
Klebsiella michiganensis M5al 0.20 BWI76_RS18750 adenosylcobinamide-GDP ribazoletransferase 0.77 BWI76_RS17875 L-serine ammonia-lyase — —
Fusobacterium nucleatum SB010 0.19 HUW76_05620 adenosylcobinamide-GDP ribazoletransferase 0.29 HUW76_06645 L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha low > 35
Klebsiella pneumoniae MKP103 0.19 KDGMDA_26005 adenosylcobinamide-GDP ribazoletransferase 0.77 KDGMDA_25160 L-serine ammonia-lyase low > 95
Phocaeicola dorei CL03T12C01 0.18 ABI39_RS16450 adenosylcobinamide-GDP ribazoletransferase 0.30 ABI39_RS12245 L-serine ammonia-lyase low > 72
Rahnella sp. WP5 0.17 EX31_RS09930 adenosylcobinamide-GDP ribazoletransferase 0.75 EX31_RS24715 L-serine ammonia-lyase low > 89
Pseudomonas sp. RS175 0.17 PFR28_03200 Adenosylcobinamide-GDP ribazoletransferase 0.50 PFR28_03384 L-serine dehydratase 2 low > 88
Pseudomonas syringae pv. syringae B728a ΔmexB 0.17 Psyr_3672 cobalamin-5'-phosphate synthase 0.48 Psyr_3522 L-serine ammonia-lyase low > 86
Pseudomonas syringae pv. syringae B728a 0.17 Psyr_3672 cobalamin-5'-phosphate synthase 0.48 Psyr_3522 L-serine ammonia-lyase low > 86
Pseudomonas segetis P6 0.15 MPMX49_01826 Adenosylcobinamide-GDP ribazoletransferase 0.50 MPMX49_03618 L-serine dehydratase 1 low > 75
Pseudomonas fluorescens FW300-N2E3 0.15 AO353_02595 cobalamin synthase 0.50 AO353_03505 serine dehydratase low > 101
Pseudomonas sp. SVBP6 0.15 COO64_RS07205 adenosylcobinamide-GDP ribazoletransferase 0.50 COO64_RS04445 L-serine ammonia-lyase low > 93
Sphingomonas koreensis DSMZ 15582 0.14 Ga0059261_0627 cobalamin-5'-phosphate synthase (EC 2.7.8.26) 0.42 Ga0059261_0220 L-serine dehydratase, iron-sulfur-dependent, single chain form low > 68
Pseudomonas fluorescens GW456-L13 0.13 PfGW456L13_4234 Cobalamin synthase 0.50 PfGW456L13_1867 L-serine dehydratase (EC 4.3.1.17) low > 87
Pseudomonas simiae WCS417 0.13 PS417_20020 cobalamin synthase 0.50 PS417_22365 serine dehydratase low > 88
Pseudomonas aeruginosa PUPa3 0.13 DQ20_RS46775 adenosylcobinamide-GDP ribazoletransferase 0.50 DQ20_RS59890 L-serine ammonia-lyase low > 101
Pseudomonas aeruginosa MRSN321 0.13 DY961_RS06005 adenosylcobinamide-GDP ribazoletransferase 0.50 DY961_RS18680 L-serine ammonia-lyase low > 100
Pseudomonas aeruginosa PA14 0.13 IKLFDK_06075 adenosylcobinamide-GDP ribazoletransferase 0.50 IKLFDK_12010 L-serine ammonia-lyase — —
Pseudomonas fluorescens FW300-N1B4 0.12 Pf1N1B4_3715 Cobalamin synthase 0.50 Pf1N1B4_622 L-serine dehydratase (EC 4.3.1.17) low > 87
Pseudomonas fluorescens SBW25 0.12 PFLU_RS21985 adenosylcobinamide-GDP ribazoletransferase 0.50 PFLU_RS24005 L-serine ammonia-lyase low > 109
Pseudomonas fluorescens SBW25-INTG 0.12 PFLU_RS21985 adenosylcobinamide-GDP ribazoletransferase 0.50 PFLU_RS24005 L-serine ammonia-lyase low > 109
Pseudomonas fluorescens FW300-N2C3 0.12 AO356_19180 cobalamin synthase 0.50 AO356_18165 serine dehydratase low > 104
Pseudomonas sp. DMC3 0.12 GFF2556 Adenosylcobinamide-GDP ribazoletransferase 0.49 GFF5170 L-serine dehydratase 2 low > 89
Pseudomonas lactucae CFBP13502 0.12 GEMAOFIL_04201 Adenosylcobinamide-GDP ribazoletransferase 0.50 GEMAOFIL_04609 L-serine dehydratase 2 low > 96
Mycobacterium tuberculosis H37Rv 0.11 Rv2208 Probable cobalamin 5'-phosphate synthase CobS 0.42 Rv0069c Probable L-serine dehydratase SdaA (L-serine deaminase) (SDH) (L-SD) low > 58
Sphingobium sp. HT1-2 0.11 GFF826 Cobalamin synthase (EC 2.7.8.26) 0.42 GFF2247 L-serine dehydratase, beta subunit (EC 4.3.1.17) / L-serine dehydratase, alpha subunit (EC 4.3.1.17) low > 95
Pseudomonas sp. S08-1 0.11 OH686_04945 cobalamin 5'-phosphate synthase 0.50 OH686_16810 L-serine ammonia-lyase low > 80
Pseudomonas sp. BP01 0.11 JOY50_RS27985 adenosylcobinamide-GDP ribazoletransferase 0.50 JOY50_RS11295 L-serine ammonia-lyase low > 84
Pseudomonas fluorescens FW300-N2E2 0.11 Pf6N2E2_5746 Cobalamin synthase 0.50 Pf6N2E2_5557 L-serine ammonia-lyase (EC 4.3.1.17) (from data) low > 103
Pseudomonas putida KT2440 0.10 PP_1681 cobalamin 5'-phosphate synthase / Cobalamin synthase 0.49 PP_0987 L-serine dehydratase low > 96

Not shown: 26 genomes with orthologs for CSW01_06265 only; 23 genomes with orthologs for CSW01_06565 only