Conservation of cofitness between CSW01_00560 and CSW01_05935 in Vibrio cholerae E7946 ATCC 55056

32 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_00560 DNA polymerase I 1.0 CSW01_05935 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase 0.87 12
Serratia liquefaciens MT49 0.66 IAI46_24985 DNA polymerase I 0.60 IAI46_14035 bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF low > 86
Rahnella sp. WP5 0.65 EX31_RS15905 DNA polymerase I 0.58 EX31_RS09970 bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF low > 89
Pectobacterium carotovorum WPP14 0.65 HER17_RS21470 DNA polymerase I 0.57 HER17_RS10930 bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF — —
Pantoea sp. MT58 0.65 IAI47_00430 DNA polymerase I 0.58 IAI47_09175 bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF low > 76
Erwinia amylovora T8 0.64 OLJFJH_05470 DNA polymerase I 0.57 OLJFJH_13480 bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF 0.58 42
Enterobacter asburiae PDN3 0.64 EX28DRAFT_4343 DNA polymerase I (EC 2.7.7.7) 0.57 EX28DRAFT_0934 indole-3-glycerol phosphate synthase (EC 4.1.1.48) — —
Escherichia coli ECOR38 0.64 HEPCGN_12785 polA DNA polymerase I 0.58 HEPCGN_25525 trpCF bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF — —
Escherichia coli Nissle 1917 0.64 ECOLIN_RS22270 DNA polymerase I 0.58 ECOLIN_RS07605 bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF — —
Escherichia coli ECRC102 0.64 NIAGMN_11905 polA DNA polymerase I 0.57 NIAGMN_26835 trpCF bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF — —
Escherichia coli ECRC101 0.64 MCAODC_04650 polA DNA polymerase I 0.57 MCAODC_15600 trpCF bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF — —
Escherichia coli BW25113 0.64 b3863 polA DNA polymerase I (NCBI) 0.58 b1262 trpC N-(5-phosphoribosyl)anthranilate isomerase and indole-3-glycerolphosphate synthetase (VIMSS) low > 76
Escherichia fergusonii Becca 0.64 EFB2_04753 DNA polymerase I 0.58 EFB2_02664 Tryptophan biosynthesis protein TrpCF — —
Escherichia coli ECOR27 0.64 NOLOHH_06280 polA DNA polymerase I 0.58 NOLOHH_20325 trpD bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD — —
Escherichia coli ECRC99 0.64 KEDOAH_14000 polA DNA polymerase I 0.57 KEDOAH_26085 trpCF bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF — —
Escherichia coli ECRC98 0.64 JDDGAC_17775 polA DNA polymerase I 0.57 JDDGAC_05210 trpCF bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF — —
Escherichia coli BL21 0.64 ECD_03749 5 0.58 ECD_01236 indole-3-glycerolphosphate synthetase and N-(5-phosphoribosyl)anthranilate isomerase — —
Escherichia coli ECRC100 0.64 OKFHMN_14150 polA DNA polymerase I 0.57 OKFHMN_02665 trpCF bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF — —
Escherichia coli ECRC62 0.64 BNILDI_05250 polA DNA polymerase I 0.58 BNILDI_18470 trpD bifunctional anthranilate synthase glutamate amidotransferase component TrpG/anthranilate phosphoribosyltransferase TrpD — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.64 OHPLBJKB_04189 DNA polymerase I 0.58 OHPLBJKB_02421 Tryptophan biosynthesis protein TrpCF — —
Erwinia tracheiphila SCR3 0.64 LU632_RS23870 polA DNA polymerase I 0.58 LU632_RS12765 trpCF bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF — —
Enterobacter sp. TBS_079 0.64 MPMX20_04601 DNA polymerase I 0.58 MPMX20_02512 Tryptophan biosynthesis protein TrpCF low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.63 GFF2216 DNA polymerase I (EC 2.7.7.7) 0.59 GFF2724 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) / Phosphoribosylanthranilate isomerase (EC 5.3.1.24) low > 78
Klebsiella michiganensis M5al 0.63 BWI76_RS00355 DNA polymerase I 0.58 BWI76_RS11850 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase low > 92
Dickeya dadantii 3937 0.63 DDA3937_RS00105 DNA polymerase I 0.59 DDA3937_RS10470 bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF — —
Shewanella loihica PV-4 0.63 Shew_3714 DNA polymerase I (RefSeq) 0.49 Shew_2254 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase (RefSeq) low > 60
Shewanella amazonensis SB2B 0.63 Sama_0093 DNA-directed DNA polymerase (RefSeq) 0.50 Sama_2132 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase (RefSeq) low > 62
Dickeya dianthicola 67-19 0.63 HGI48_RS21260 DNA polymerase I 0.58 HGI48_RS10470 bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF — —
Shewanella sp. ANA-3 0.62 Shewana3_4109 DNA polymerase I (RefSeq) 0.43 Shewana3_1517 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase (RefSeq) — —
Dickeya dianthicola ME23 0.62 DZA65_RS22235 DNA polymerase I 0.58 DZA65_RS10950 bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF — —
Shewanella oneidensis MR-1 0.62 SO4669 polA DNA polymerase I (NCBI ptt file) 0.41 SO3022 trpC/F indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase (NCBI ptt file) — —
Alteromonas macleodii MIT1002 0.62 MIT1002_00014 DNA polymerase I 0.52 MIT1002_01427 Tryptophan biosynthesis protein TrpCF low > 70
Kangiella aquimarina DSM 16071 0.59 B158DRAFT_0499 DNA polymerase I (EC 2.7.7.7) 0.36 B158DRAFT_2428 indole-3-glycerol phosphate synthase (EC 4.1.1.48) low > 40

Not shown: 76 genomes with orthologs for CSW01_00560 only; 0 genomes with orthologs for CSW01_05935 only