Conservation of cofitness between CSW01_17635 and CSW01_05370 in Vibrio cholerae E7946 ATCC 55056

53 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_17635 class I poly(R)-hydroxyalkanoic acid synthase 1.0 CSW01_05370 YbaB/EbfC family nucleoid-associated protein 0.54 3
Dechlorosoma suillum PS 0.46 Dsui_0971 poly(R)-hydroxyalkanoic acid synthase, class I 0.64 Dsui_1810 DNA-binding protein, YbaB/EbfC family low > 51
Azospirillum brasilense Sp245 0.45 AZOBR_RS07810 poly(3-hydroxyalkanoate) synthetase 0.40 AZOBR_RS03875 hypothetical protein
Azospirillum sp. SherDot2 0.45 MPMX19_03965 Poly(3-hydroxyalkanoate) polymerase subunit PhaC 0.40 MPMX19_02194 Nucleoid-associated protein YbaB
Rhodospirillum rubrum S1H 0.44 Rru_A2413 Poly(R)-hydroxyalkanoic acid synthase, class I (NCBI) 0.51 Rru_A3472 hypothetical protein (NCBI)
Marinobacter adhaerens HP15 0.43 HP15_2132 polyhydroxyalkanoic acid synthase 0.66 HP15_1884 protein belonging to uncharacterized protein family UPF0133
Magnetospirillum magneticum AMB-1 0.42 AMB_RS18850 class I poly(R)-hydroxyalkanoic acid synthase 0.49 AMB_RS20750 YbaB/EbfC family nucleoid-associated protein low > 64
Bosea sp. OAE506 0.40 ABIE41_RS19185 class I poly(R)-hydroxyalkanoic acid synthase 0.44 ABIE41_RS04030 YbaB/EbfC family nucleoid-associated protein
Dinoroseobacter shibae DFL-12 0.38 Dshi_2233 poly(R)-hydroxyalkanoic acid synthase, class I (RefSeq) 0.43 Dshi_0649 hypothetical protein (RefSeq) low > 64
Xanthobacter sp. DMC5 0.37 GFF1320 hypothetical protein 0.45 GFF2305 Nucleoid-associated protein YbaB
Ralstonia solanacearum GMI1000 0.37 RS_RS08220 class I poly(R)-hydroxyalkanoic acid synthase 0.57 RS_RS05975 YbaB/EbfC family nucleoid-associated protein
Paraburkholderia sabiae LMG 24235 0.37 QEN71_RS30585 class I poly(R)-hydroxyalkanoic acid synthase 0.65 QEN71_RS22290 YbaB/EbfC family nucleoid-associated protein
Agrobacterium fabrum C58 0.36 Atu1604 poly-beta-hydroxybutyrate synthase 0.44 Atu0095 hypothetical protein low > 89
Rhizobium sp. OAE497 0.36 ABIE40_RS08635 class I poly(R)-hydroxyalkanoic acid synthase 0.40 ABIE40_RS00285 YbaB/EbfC family nucleoid-associated protein
Ralstonia solanacearum IBSBF1503 0.36 RALBFv3_RS01505 class I poly(R)-hydroxyalkanoic acid synthase 0.57 RALBFv3_RS15160 nucleoid-associated protein, YbaB/EbfC family
Ralstonia solanacearum UW163 0.36 UW163_RS14815 class I poly(R)-hydroxyalkanoic acid synthase 0.57 UW163_RS12630 nucleoid-associated protein, YbaB/EbfC family
Rhodopseudomonas palustris CGA009 0.36 TX73_012925 class I poly(R)-hydroxyalkanoic acid synthase 0.36 TX73_003190 YbaB/EbfC family nucleoid-associated protein
Ralstonia sp. UNC404CL21Col 0.36 ABZR87_RS13300 class I poly(R)-hydroxyalkanoic acid synthase 0.57 ABZR87_RS10800 YbaB/EbfC family nucleoid-associated protein low > 80
Ralstonia solanacearum PSI07 0.36 RPSI07_RS15985 class I poly(R)-hydroxyalkanoic acid synthase 0.57 RPSI07_RS18215 YbaB/EbfC family nucleoid-associated protein
Acidovorax sp. GW101-3H11 0.35 Ac3H11_2304 Polyhydroxyalkanoic acid synthase 0.60 Ac3H11_472 FIG000557: hypothetical protein co-occurring with RecR
Sinorhizobium meliloti 1021 0.35 SMc00296 POLY3-hydroxybutyrate polymerase 0.43 SMc02906 hypothetical protein low > 103
Phaeobacter inhibens DSM 17395 0.35 PGA1_c20930 poly(3-hydroxyalkanoate) polymerase PhaC 0.40 PGA1_c30280 DNA-binding protein, YbaB/EbfC family low > 62
Herbaspirillum seropedicae SmR1 0.35 HSERO_RS15040 poly(R)-hydroxyalkanoic acid synthase 0.64 HSERO_RS18365 hypothetical protein low > 78
Hydrogenophaga sp. GW460-11-11-14-LB1 0.34 GFF4797 Polyhydroxyalkanoic acid synthase 0.63 GFF4252 FIG000557: hypothetical protein co-occurring with RecR low > 90
Variovorax sp. SCN45 0.34 GFF808 Polyhydroxyalkanoic acid synthase 0.64 GFF1109 Nucleoid-associated protein YaaK
Brevundimonas sp. GW460-12-10-14-LB2 0.34 A4249_RS05905 class I poly(R)-hydroxyalkanoic acid synthase 0.22 A4249_RS15110 YbaB/EbfC family nucleoid-associated protein low > 48
Variovorax sp. OAS795 0.34 ABID97_RS26570 class I poly(R)-hydroxyalkanoic acid synthase 0.64 ABID97_RS14695 YbaB/EbfC family nucleoid-associated protein
Burkholderia phytofirmans PsJN 0.33 BPHYT_RS09145 poly-beta-hydroxybutyrate polymerase 0.65 BPHYT_RS09060 hypothetical protein
Paraburkholderia bryophila 376MFSha3.1 0.33 H281DRAFT_00851 polyhydroxyalkanoate synthase 0.65 H281DRAFT_00833 hypothetical protein
Cupriavidus basilensis FW507-4G11 0.33 RR42_RS07605 poly-beta-hydroxybutyrate polymerase 0.61 RR42_RS13280 hypothetical protein
Sphingomonas koreensis DSMZ 15582 0.33 Ga0059261_1287 poly(R)-hydroxyalkanoic acid synthase, class I 0.37 Ga0059261_0668 DNA-binding protein, YbaB/EbfC family
Pseudomonas fluorescens FW300-N2E3 0.33 AO353_01070 poly(R)-hydroxyalkanoic acid synthase 0.63 AO353_00680 nucleoid-associated protein
Paraburkholderia graminis OAS925 0.32 ABIE53_002064 polyhydroxyalkanoate synthase 0.65 ABIE53_002047 DNA-binding YbaB/EbfC family protein
Sphingobium sp. HT1-2 0.31 GFF645 Polyhydroxyalkanoic acid synthase 0.41 GFF1675 Nucleoid-associated protein YaaK low > 95
Castellaniella sp019104865 MT123 0.31 ABCV34_RS01895 class I poly(R)-hydroxyalkanoic acid synthase 0.59 ABCV34_RS15475 YbaB/EbfC family nucleoid-associated protein
Pseudomonas sp. RS175 0.29 PFR28_04994 Poly(3-hydroxyalkanoate) polymerase subunit PhaC 0.65 PFR28_01075 Nucleoid-associated protein YbaB
Pseudomonas putida KT2440 0.28 PP_5005 Poly(3-hydroxyalkanoate) polymerase 2 0.71 PP_4268 nucleoid-associated broad specificity regulator low > 96
Pseudomonas fluorescens FW300-N2C3 0.28 AO356_09480 poly(R)-hydroxyalkanoic acid synthase 0.64 AO356_02505 nucleoid-associated protein
Pseudomonas sp. SVBP6 0.28 COO64_RS13540 phaC class II poly(R)-hydroxyalkanoic acid synthase 0.70 COO64_RS18600 YbaB/EbfC family nucleoid-associated protein
Pseudomonas sp. BP01 0.28 JOY50_RS09665 phaC class II poly(R)-hydroxyalkanoic acid synthase 0.71 JOY50_RS00140 YbaB/EbfC family nucleoid-associated protein low > 84
Pseudomonas orientalis W4I3 0.28 QF045_RS04955 class II poly(R)-hydroxyalkanoic acid synthase 0.65 QF045_RS22615 YbaB/EbfC family nucleoid-associated protein
Pseudomonas fluorescens FW300-N2E2 0.28 Pf6N2E2_3774 Polyhydroxyalkanoic acid synthase 0.64 Pf6N2E2_2327 FIG000557: hypothetical protein co-occurring with RecR
Pseudomonas simiae WCS417 0.28 PS417_01895 poly(R)-hydroxyalkanoic acid synthase 0.63 PS417_20810 hypothetical protein
Pseudomonas lactucae CFBP13502 0.28 GEMAOFIL_00612 Poly(3-hydroxyalkanoate) polymerase subunit PhaC 0.63 GEMAOFIL_04306 Nucleoid-associated protein YbaB
Pseudomonas sp. DMC3 0.28 GFF3081 Poly(3-hydroxyalkanoate) polymerase subunit PhaC 0.54 GFF706 Nucleoid-associated protein YbaB low > 89
Pseudomonas fluorescens SBW25 0.28 PFLU_RS01950 class II poly(R)-hydroxyalkanoic acid synthase 0.63 PFLU_RS22425 YbaB/EbfC family nucleoid-associated protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.28 PFLU_RS01950 class II poly(R)-hydroxyalkanoic acid synthase 0.63 PFLU_RS22425 YbaB/EbfC family nucleoid-associated protein
Pseudomonas segetis P6 0.27 ACVTMO_RS21080 phaC class II poly(R)-hydroxyalkanoic acid synthase 0.70 ACVTMO_RS11085 YbaB/EbfC family nucleoid-associated protein
Pseudomonas fluorescens GW456-L13 0.27 PfGW456L13_294 Polyhydroxyalkanoic acid synthase 0.63 PfGW456L13_4076 FIG000557: hypothetical protein co-occurring with RecR
Pseudomonas sp. S08-1 0.27 OH686_10110 Polyhydroxyalkanoic acid synthase 0.72 OH686_02390 DNA-binding protein, YbaB/EbfC family
Pseudomonas fluorescens FW300-N1B4 0.27 Pf1N1B4_1557 Polyhydroxyalkanoic acid synthase 0.64 Pf1N1B4_3863 FIG000557: hypothetical protein co-occurring with RecR
Pseudomonas aeruginosa PUPa3 0.27 DQ20_RS50965 phaC;go_function=acyltransferase class II poly(R)-hydroxyalkanoic acid synthase 0.72 DQ20_RS53420 YbaB/EbfC family nucleoid-associated protein
Pseudomonas aeruginosa MRSN321 0.27 DY961_RS11120 phaC;go_function=acyltransferase class II poly(R)-hydroxyalkanoic acid synthase 0.72 DY961_RS19290 YbaB/EbfC family nucleoid-associated protein
Pseudomonas aeruginosa PA14 0.27 IKLFDK_28235 class II poly(R)-hydroxyalkanoic acid synthase 0.72 IKLFDK_07320 YbaB/EbfC family nucleoid-associated protein

Not shown: 0 genomes with orthologs for CSW01_17635 only; 56 genomes with orthologs for CSW01_05370 only