Conservation of cofitness between CSW01_06950 and CSW01_05070 in Vibrio cholerae E7946 ATCC 55056

44 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_06950 ATP-dependent RNA helicase HrpA 1.0 CSW01_05070 N-acetylglucosamine-6-phosphate deacetylase 0.68 12
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.72 GFF2632 ATP-dependent RNA helicase HrpA (EC 3.6.4.13) 0.62 GFF4585 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) 0.62 13
Escherichia coli HS(pFamp)R (ATCC 700891) 0.71 OHPLBJKB_02301 hypothetical protein 0.63 OHPLBJKB_03038 N-acetylglucosamine-6-phosphate deacetylase 0.74 9
Escherichia coli ECRC99 0.71 KEDOAH_26710 hrpA ATP-dependent RNA helicase HrpA 0.63 KEDOAH_20805 nagA N-acetylglucosamine-6-phosphate deacetylase — —
Escherichia coli ECRC100 0.71 OKFHMN_01730 hrpA ATP-dependent RNA helicase HrpA 0.63 OKFHMN_07165 nagA N-acetylglucosamine-6-phosphate deacetylase low > 79
Escherichia coli ECRC101 0.71 MCAODC_16205 hrpA ATP-dependent RNA helicase HrpA 0.63 MCAODC_26380 nagA N-acetylglucosamine-6-phosphate deacetylase low > 88
Enterobacter asburiae PDN3 0.71 EX28DRAFT_1357 RNA helicase HrpA 0.64 EX28DRAFT_2298 N-acetylglucosamine-6-phosphate deacetylase low > 76
Escherichia coli ECRC102 0.71 NIAGMN_25865 hrpA ATP-dependent RNA helicase HrpA 0.63 NIAGMN_05220 nagA N-acetylglucosamine-6-phosphate deacetylase 0.58 45
Escherichia coli ECRC98 0.71 JDDGAC_04220 hrpA ATP-dependent RNA helicase HrpA 0.63 JDDGAC_10815 nagA N-acetylglucosamine-6-phosphate deacetylase low > 87
Enterobacter sp. TBS_079 0.71 MPMX20_02189 hypothetical protein 0.63 MPMX20_01323 N-acetylglucosamine-6-phosphate deacetylase low > 85
Escherichia coli ECOR27 0.71 NOLOHH_19390 hrpA ATP-dependent RNA helicase HrpA 0.63 NOLOHH_23545 nagA N-acetylglucosamine-6-phosphate deacetylase 0.34 64
Escherichia coli BL21 0.71 ECD_01368 putative ATP-dependent helicase 0.63 ECD_00634 N-acetylglucosamine-6-phosphate deacetylase low > 61
Escherichia coli BW25113 0.71 b1413 hrpA ATP-dependent helicase (RefSeq) 0.63 b0677 nagA N-acetylglucosamine-6-phosphate deacetylase (NCBI) 0.19 49
Escherichia coli ECRC62 0.71 BNILDI_17845 hrpA ATP-dependent RNA helicase HrpA 0.63 BNILDI_21550 nagA N-acetylglucosamine-6-phosphate deacetylase low > 75
Escherichia fergusonii Becca 0.71 EFB2_02565 hypothetical protein 0.63 EFB2_03426 N-acetylglucosamine-6-phosphate deacetylase low > 86
Escherichia coli Nissle 1917 0.71 ECOLIN_RS08180 ATP-dependent RNA helicase HrpA 0.63 ECOLIN_RS03615 N-acetylglucosamine-6-phosphate deacetylase — —
Escherichia coli ECOR38 0.71 HEPCGN_26110 hrpA ATP-dependent RNA helicase HrpA 0.63 HEPCGN_01065 nagA N-acetylglucosamine-6-phosphate deacetylase low > 88
Klebsiella pneumoniae MKP103 0.71 KDGMDA_20775 ATP-dependent RNA helicase HrpA 0.65 KDGMDA_16555 N-acetylglucosamine-6-phosphate deacetylase low > 95
Klebsiella michiganensis M5al 0.70 BWI76_RS13165 ATP-dependent RNA helicase HrpA 0.64 BWI76_RS08210 N-acetylglucosamine-6-phosphate deacetylase low > 92
Pantoea sp. MT58 0.70 IAI47_09520 ATP-dependent RNA helicase HrpA 0.64 IAI47_13885 N-acetylglucosamine-6-phosphate deacetylase low > 76
Serratia liquefaciens MT49 0.70 IAI46_13330 ATP-dependent RNA helicase HrpA 0.65 IAI46_06085 N-acetylglucosamine-6-phosphate deacetylase low > 86
Pantoea agglomerans CFBP13505 P0401 0.70 PagCFBP13505_RS06635 ATP-dependent RNA helicase HrpA 0.64 PagCFBP13505_RS03420 N-acetylglucosamine-6-phosphate deacetylase low > 74
Rahnella sp. WP5 0.70 EX31_RS06495 ATP-dependent RNA helicase HrpA 0.67 EX31_RS23260 N-acetylglucosamine-6-phosphate deacetylase low > 89
Pectobacterium carotovorum WPP14 0.69 HER17_RS09660 ATP-dependent RNA helicase HrpA 0.64 HER17_RS15110 N-acetylglucosamine-6-phosphate deacetylase low > 75
Dickeya dadantii 3937 0.69 DDA3937_RS12270 ATP-dependent RNA helicase HrpA 0.64 DDA3937_RS06305 N-acetylglucosamine-6-phosphate deacetylase low > 74
Erwinia amylovora T8 0.69 OLJFJH_13820 ATP-dependent RNA helicase HrpA 0.61 OLJFJH_17090 N-acetylglucosamine-6-phosphate deacetylase low > 58
Dickeya dianthicola ME23 0.69 DZA65_RS12800 ATP-dependent RNA helicase HrpA 0.63 DZA65_RS06695 N-acetylglucosamine-6-phosphate deacetylase low > 75
Erwinia tracheiphila HP pepo 2.2 0.69 IJEDHG_23640 hrpA ATP-dependent RNA helicase HrpA 0.61 IJEDHG_02305 nagA N-acetylglucosamine-6-phosphate deacetylase — —
Erwinia tracheiphila SCR3 0.69 LU632_RS12630 hrpA ATP-dependent RNA helicase HrpA 0.61 LU632_RS16250 nagA N-acetylglucosamine-6-phosphate deacetylase low > 74
Dickeya dianthicola 67-19 0.69 HGI48_RS12360 ATP-dependent RNA helicase HrpA 0.63 HGI48_RS06350 N-acetylglucosamine-6-phosphate deacetylase low > 71
Shewanella loihica PV-4 0.57 Shew_1767 ATP-dependent helicase HrpA (RefSeq) 0.30 Shew_1117 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) (from data) low > 60
Shewanella oneidensis MR-1 0.57 SO2229 hrpA ATP-dependent helicase HrpA (NCBI ptt file) 0.31 SO3505 nagA N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) (from data) low > 76
Shewanella amazonensis SB2B 0.57 Sama_1619 ATP-dependent helicase HrpA (RefSeq) 0.29 Sama_0946 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) (from data) low > 62
Alteromonas macleodii MIT1002 0.55 MIT1002_01685 ATP-dependent RNA helicase HrpB 0.27 MIT1002_00910 N-acetylglucosamine-6-phosphate deacetylase low > 70
Pseudomonas sp. SVBP6 0.45 COO64_RS22000 hrpA ATP-dependent RNA helicase HrpA 0.20 COO64_RS04730 nagA N-acetylglucosamine-6-phosphate deacetylase low > 93
Pseudomonas fluorescens GW456-L13 0.45 PfGW456L13_4467 ATP-dependent RNA helicase HrpA (EC 3.6.4.13) 0.20 PfGW456L13_4830 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) (from data) low > 87
Pseudomonas fluorescens FW300-N2C3 0.45 AO356_04280 ATP-dependent RNA helicase HrpA 0.18 AO356_17550 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) (from data) low > 104
Paraburkholderia graminis OAS925 0.40 ABIE53_002813 ATP-dependent helicase HrpA 0.19 ABIE53_000689 N-acetylglucosamine-6-phosphate deacetylase low > 113
Dyella japonica UNC79MFTsu3.2 0.37 ABZR86_RS19720 ATP-dependent RNA helicase HrpA 0.34 ABZR86_RS16045 N-acetylglucosamine-6-phosphate deacetylase low > 74
Rhodanobacter sp000427505 FW510-R12 0.36 LRK53_RS15885 ATP-dependent RNA helicase HrpA 0.37 LRK53_RS00690 N-acetylglucosamine-6-phosphate deacetylase low > 59
Burkholderia phytofirmans PsJN 0.36 BPHYT_RS12980 ATP-dependent helicase 0.19 BPHYT_RS02730 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) (from data) low > 109
Lysobacter sp. OAE881 0.36 ABIE51_RS05155 ATP-dependent RNA helicase HrpA 0.39 ABIE51_RS01635 N-acetylglucosamine-6-phosphate deacetylase low > 62
Rhodanobacter denitrificans MT42 0.34 LRK55_RS12420 ATP-dependent RNA helicase HrpA 0.35 LRK55_RS07585 N-acetylglucosamine-6-phosphate deacetylase — —
Rhodanobacter denitrificans FW104-10B01 0.34 LRK54_RS12715 ATP-dependent RNA helicase HrpA 0.35 LRK54_RS07855 N-acetylglucosamine-6-phosphate deacetylase — —
Rhodanobacter sp. FW510-T8 0.33 OKGIIK_02155 hrpA ATP-dependent RNA helicase HrpA 0.35 OKGIIK_14345 nagA N-acetylglucosamine-6-phosphate deacetylase low > 53

Not shown: 37 genomes with orthologs for CSW01_06950 only; 24 genomes with orthologs for CSW01_05070 only