Conservation of cofitness between CSW01_03920 and CSW01_04820 in Vibrio cholerae E7946 ATCC 55056

35 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_03920 peptidase B 1.0 CSW01_04820 serine hydroxymethyltransferase 0.88 20
Erwinia amylovora T8 0.63 OLJFJH_10370 aminopeptidase PepB 0.79 OLJFJH_10340 Serine hydroxymethyltransferase — —
Serratia liquefaciens MT49 0.63 IAI46_19320 aminopeptidase PepB 0.81 IAI46_19395 serine hydroxymethyltransferase — —
Escherichia coli ECRC101 0.62 MCAODC_12185 pepB aminopeptidase PepB 0.79 MCAODC_12040 glyA serine hydroxymethyltransferase — —
Escherichia coli ECRC98 0.62 JDDGAC_25330 pepB aminopeptidase PepB 0.79 JDDGAC_25175 glyA serine hydroxymethyltransferase — —
Escherichia coli ECRC62 0.62 BNILDI_12125 pepB aminopeptidase PepB 0.79 BNILDI_11985 glyA serine hydroxymethyltransferase low > 75
Escherichia coli ECRC100 0.62 OKFHMN_21655 pepB aminopeptidase PepB 0.79 OKFHMN_21510 glyA serine hydroxymethyltransferase low > 79
Escherichia coli ECRC102 0.62 NIAGMN_19425 pepB aminopeptidase PepB 0.79 NIAGMN_19280 glyA serine hydroxymethyltransferase low > 80
Escherichia coli ECRC99 0.62 KEDOAH_06565 pepB aminopeptidase PepB 0.79 KEDOAH_06710 glyA serine hydroxymethyltransferase — —
Dickeya dadantii 3937 0.62 DDA3937_RS15510 aminopeptidase PepB 0.81 DDA3937_RS15600 serine hydroxymethyltransferase — —
Escherichia coli BL21 0.62 ECD_02415 aminopeptidase B 0.79 ECD_02443 serine hydroxymethyltransferase low > 61
Escherichia coli ECOR27 0.62 NOLOHH_13325 pepB aminopeptidase PepB 0.79 NOLOHH_13185 glyA serine hydroxymethyltransferase low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.62 OHPLBJKB_01186 Peptidase B 0.79 OHPLBJKB_01156 Serine hydroxymethyltransferase low > 74
Erwinia tracheiphila SCR3 0.61 LU632_RS17865 pepB aminopeptidase PepB 0.80 LU632_RS17915 serine hydroxymethyltransferase — —
Erwinia tracheiphila HP pepo 2.2 0.61 IJEDHG_02865 pepB aminopeptidase PepB 0.80 IJEDHG_02915 Serine hydroxymethyltransferase 1 — —
Escherichia fergusonii Becca 0.61 EFB2_01367 Peptidase B 0.79 EFB2_01345 Serine hydroxymethyltransferase — —
Escherichia coli Nissle 1917 0.61 ECOLIN_RS14330 aminopeptidase PepB 0.79 ECOLIN_RS14440 serine hydroxymethyltransferase — —
Escherichia coli BW25113 0.61 b2523 pepB putative peptidase (VIMSS) 0.79 b2551 glyA serine hydroxymethyltransferase (NCBI) — —
Klebsiella pneumoniae MKP103 0.61 KDGMDA_28250 aminopeptidase PepB 0.79 KDGMDA_28355 Serine hydroxymethyltransferase low > 95
Klebsiella michiganensis M5al 0.61 BWI76_RS21125 aminopeptidase PepB 0.79 BWI76_RS21225 serine hydroxymethyltransferase — —
Dickeya dianthicola 67-19 0.61 HGI48_RS15610 aminopeptidase PepB 0.81 HGI48_RS15700 serine hydroxymethyltransferase — —
Pantoea sp. MT58 0.60 IAI47_05010 aminopeptidase PepB 0.81 IAI47_04960 serine hydroxymethyltransferase — —
Dickeya dianthicola ME23 0.60 DZA65_RS16685 aminopeptidase PepB 0.81 DZA65_RS16775 serine hydroxymethyltransferase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.60 GFF2428 Peptidase B (EC 3.4.11.23) 0.79 GFF2447 Serine hydroxymethyltransferase (EC 2.1.2.1) — —
Pantoea agglomerans CFBP13505 P0401 0.60 PagCFBP13505_RS14900 aminopeptidase PepB 0.81 PagCFBP13505_RS14850 serine hydroxymethyltransferase — —
Escherichia coli ECOR38 0.60 HEPCGN_20795 pepB aminopeptidase PepB 0.79 HEPCGN_20655 glyA serine hydroxymethyltransferase low > 88
Enterobacter asburiae PDN3 0.60 EX28DRAFT_0117 Leucyl aminopeptidase 0.79 EX28DRAFT_0099 Glycine/serine hydroxymethyltransferase — —
Enterobacter sp. TBS_079 0.60 MPMX20_03404 Peptidase B 0.79 MPMX20_03420 Serine hydroxymethyltransferase — —
Rahnella sp. WP5 0.59 EX31_RS20540 aminopeptidase PepB 0.80 EX31_RS20585 serine hydroxymethyltransferase — —
Pectobacterium carotovorum WPP14 0.58 HER17_RS06050 aminopeptidase PepB 0.81 HER17_RS05950 serine hydroxymethyltransferase — —
Alteromonas macleodii MIT1002 0.45 MIT1002_03688 Peptidase B 0.73 MIT1002_02702 Serine hydroxymethyltransferase low > 70
Kangiella aquimarina DSM 16071 0.45 B158DRAFT_0048 Leucyl aminopeptidase 0.72 B158DRAFT_1908 Glycine/serine hydroxymethyltransferase low > 40
Shewanella amazonensis SB2B 0.44 Sama_0782 aminopeptidase B (RefSeq) 0.82 Sama_1014 glyA serine hydroxymethyltransferase (RefSeq) low > 62
Shewanella oneidensis MR-1 0.43 SO0876 pepB peptidase B (NCBI ptt file) 0.83 SO3471 glyA serine hydroxymethyltransferase (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.42 Shew_3127 aminopeptidase B (RefSeq) 0.81 Shew_1185 glyA serine hydroxymethyltransferase (RefSeq) low > 60
Shewanella sp. ANA-3 0.42 Shewana3_3402 aminopeptidase B (RefSeq) 0.83 Shewana3_1094 glyA serine hydroxymethyltransferase (RefSeq) low > 73

Not shown: 1 genomes with orthologs for CSW01_03920 only; 61 genomes with orthologs for CSW01_04820 only