Conservation of cofitness between CSW01_12815 and CSW01_04660 in Vibrio cholerae E7946 ATCC 55056

20 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_12815 RNA polymerase sigma-54 factor 1.0 CSW01_04660 PTS trehalose transporter subunit IIBC 0.59 4
Klebsiella pneumoniae MKP103 0.63 KDGMDA_06080 RNA polymerase factor sigma-54 0.71 KDGMDA_11435 PTS trehalose transporter subunit IIBC low > 95
Escherichia coli ECRC102 0.63 NIAGMN_15700 rpoN RNA polymerase factor sigma-54 0.68 NIAGMN_09745 treB PTS trehalose transporter subunit IIBC — —
Escherichia coli ECRC101 0.63 MCAODC_08460 rpoN RNA polymerase factor sigma-54 0.68 MCAODC_02400 treB PTS trehalose transporter subunit IIBC — —
Escherichia coli ECRC100 0.63 OKFHMN_17940 rpoN RNA polymerase factor sigma-54 0.68 OKFHMN_11895 treB PTS trehalose transporter subunit IIBC — —
Escherichia fergusonii Becca 0.63 EFB2_00621 RNA polymerase sigma-54 factor 0.68 EFB2_04293 PTS system trehalose-specific EIIBC component — —
Escherichia coli BL21 0.63 ECD_03067 RNA polymerase, sigma 54 (sigma N) factor 0.70 ECD_04108 trehalose-specific PTS enzyme: IIB and IIC component low > 61
Escherichia coli ECRC62 0.63 BNILDI_01795 rpoN RNA polymerase factor sigma-54 0.70 BNILDI_07350 treB PTS trehalose transporter subunit IIBC — —
Escherichia coli ECOR38 0.63 HEPCGN_16815 rpoN RNA polymerase factor sigma-54 0.68 HEPCGN_10090 treB PTS trehalose transporter subunit IIBC — —
Escherichia coli ECRC99 0.63 KEDOAH_10210 rpoN RNA polymerase factor sigma-54 0.68 KEDOAH_16260 treB PTS trehalose transporter subunit IIBC — —
Escherichia coli Nissle 1917 0.63 ECOLIN_RS18425 RNA polymerase factor sigma-54 0.68 ECOLIN_RS24600 PTS trehalose transporter subunit IIBC — —
Rahnella sp. WP5 0.63 EX31_RS12400 RNA polymerase factor sigma-54 0.72 EX31_RS08385 PTS trehalose transporter subunit IIBC low > 89
Escherichia coli ECRC98 0.63 JDDGAC_21565 rpoN RNA polymerase factor sigma-54 0.68 JDDGAC_15535 treB PTS trehalose transporter subunit IIBC — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.63 OHPLBJKB_00498 RNA polymerase sigma-54 factor 0.70 OHPLBJKB_03795 PTS system trehalose-specific EIIBC component — —
Escherichia coli ECOR27 0.62 NOLOHH_09740 rpoN RNA polymerase factor sigma-54 0.68 NOLOHH_04160 treB PTS trehalose transporter subunit IIBC — —
Enterobacter asburiae PDN3 0.62 EX28DRAFT_3256 RNA polymerase, sigma 54 subunit, RpoN/SigL 0.72 EX28DRAFT_3439 PTS system, trehalose-specific IIBC component — —
Klebsiella michiganensis M5al 0.62 BWI76_RS25265 RNA polymerase factor sigma-54 0.71 BWI76_RS02965 PTS trehalose transporter subunit IIBC — —
Escherichia coli BW25113 0.62 b3202 rpoN DNA-directed RNA polymerase subunit N (NCBI) 0.68 b4240 treB fused trehalose(maltose)-specific PTS enzyme: IIB component/IIC component (NCBI) — —
Serratia liquefaciens MT49 0.62 IAI46_22470 RNA polymerase factor sigma-54 0.68 IAI46_02155 PTS trehalose transporter subunit IIBC — —
Pectobacterium carotovorum WPP14 0.62 HER17_RS20060 RNA polymerase factor sigma-54 0.72 HER17_RS07200 PTS trehalose transporter subunit IIBC low > 75
Enterobacter sp. TBS_079 0.61 MPMX20_04108 RNA polymerase sigma-54 factor 0.72 MPMX20_00538 PTS system trehalose-specific EIIBC component — —

Not shown: 93 genomes with orthologs for CSW01_12815 only; 0 genomes with orthologs for CSW01_04660 only