Conservation of cofitness between CSW01_04870 and CSW01_04515 in Vibrio cholerae E7946 ATCC 55056

32 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_04870 ribosome silencing factor 1.0 CSW01_04515 50S ribosomal protein L36 0.48 10
Dickeya dianthicola 67-19 0.71 HGI48_RS06225 ribosome silencing factor 0.81 HGI48_RS05780 50S ribosomal protein L36 low > 71
Pectobacterium carotovorum WPP14 0.71 HER17_RS15235 ribosome silencing factor 0.61 HER17_RS15750 type B 50S ribosomal protein L36 low > 75
Pantoea agglomerans CFBP13505 P0401 0.70 PagCFBP13505_RS03290 ribosome silencing factor 0.85 PagCFBP13505_RS10670 50S ribosomal protein L36 low > 74
Dickeya dianthicola ME23 0.70 DZA65_RS06570 ribosome silencing factor 0.81 DZA65_RS06105 50S ribosomal protein L36 low > 75
Pantoea sp. MT58 0.70 IAI47_14015 ribosome silencing factor 0.85 IAI47_14525 50S ribosomal protein L36 low > 76
Dickeya dadantii 3937 0.69 DDA3937_RS06180 ribosome silencing factor 0.81 DDA3937_RS21985 50S ribosomal protein L36 low > 74
Escherichia coli Nissle 1917 0.67 ECOLIN_RS03470 ribosome silencing factor 0.90 ECOLIN_RS01920 type B 50S ribosomal protein L36 — —
Enterobacter sp. TBS_079 0.67 MPMX20_01296 Ribosomal silencing factor RsfS 0.90 MPMX20_01057 50S ribosomal protein L36 2 low > 85
Escherichia coli HS(pFamp)R (ATCC 700891) 0.67 OHPLBJKB_03069 Ribosomal silencing factor RsfS 0.90 OHPLBJKB_03386 50S ribosomal protein L36 2 low > 74
Escherichia fergusonii Becca 0.67 EFB2_03455 Ribosomal silencing factor RsfS 0.90 EFB2_03749 50S ribosomal protein L36 2 low > 86
Escherichia coli BW25113 0.67 b0637 ybeB orf, hypothetical protein (VIMSS) 0.90 b4506 ykgO rpmJ (L36) paralog (NCBI) — —
Escherichia coli ECRC98 0.67 JDDGAC_11000 rsfS ribosome silencing factor 0.90 JDDGAC_12835 50S ribosomal protein L36 2 low > 87
Escherichia coli ECRC101 0.67 MCAODC_26570 rsfS ribosome silencing factor 0.90 MCAODC_28410 50S ribosomal protein L36 2 low > 88
Escherichia coli ECRC62 0.67 BNILDI_21740 rsfS ribosome silencing factor 0.90 BNILDI_00090 50S ribosomal protein L36 2 low > 75
Escherichia coli ECOR27 0.67 NOLOHH_23730 rsfS ribosome silencing factor 0.90 NOLOHH_01970 50S ribosomal protein L36 2 low > 76
Escherichia coli ECRC99 0.67 KEDOAH_20615 rsfS ribosome silencing factor 0.90 KEDOAH_18755 50S ribosomal protein L36 2 — —
Escherichia coli ECRC100 0.67 OKFHMN_07355 rsfS ribosome silencing factor 0.90 OKFHMN_09195 50S ribosomal protein L36 2 low > 79
Escherichia coli ECRC102 0.67 NIAGMN_05410 rsfS ribosome silencing factor 0.90 NIAGMN_07250 50S ribosomal protein L36 2 low > 80
Escherichia coli ECOR38 0.67 HEPCGN_00920 rsfS ribosome silencing factor 0.90 HEPCGN_07715 50S ribosomal protein L36 2 low > 88
Erwinia amylovora T8 0.66 OLJFJH_17215 ribosome silencing factor 0.79 OLJFJH_17865 type B 50S ribosomal protein L36 — —
Rahnella sp. WP5 0.65 EX31_RS23130 ribosome silencing factor 0.88 EX31_RS22460 50S ribosomal protein L36 low > 89
Klebsiella pneumoniae MKP103 0.65 KDGMDA_16405 ribosome silencing factor 0.87 KDGMDA_14800 type B 50S ribosomal protein L31 low > 95
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.65 GFF4550 Iojap protein 0.84 GFF4374 LSU ribosomal protein L36p low > 78
Serratia liquefaciens MT49 0.65 IAI46_05940 ribosome silencing factor 0.88 IAI46_05175 50S ribosomal protein L36 — —
Klebsiella michiganensis M5al 0.65 BWI76_RS08045 ribosome silencing factor RsfS 0.90 BWI76_RS06740 50S ribosomal protein L36 — —
Erwinia tracheiphila SCR3 0.59 LU632_RS16365 rsfS ribosome silencing factor 0.81 LU632_RS18195 ykgO type B 50S ribosomal protein L36 low > 74
Erwinia tracheiphila HP pepo 2.2 0.58 IJEDHG_02455 rsfS ribosome silencing factor 0.81 IJEDHG_16570 ykgO type B 50S ribosomal protein L36 low > 61
Pseudomonas aeruginosa PA14 0.53 IKLFDK_20655 ribosome silencing factor 0.82 IKLFDK_18380 type B 50S ribosomal protein L36 low > 100
Azospirillum brasilense Sp245 0.39 AZOBR_RS04065 ribosome-associated protein IOJAP 0.65 AZOBR_RS05715 50S ribosomal protein L36 — —
Dinoroseobacter shibae DFL-12 0.38 Dshi_0087 iojap-like protein (RefSeq) 0.60 Dshi_0387 ribosomal protein L36 (RefSeq) — —
Sphingobium sp. HT1-2 0.34 GFF750 Ribosomal silencing factor RsfA 0.61 GFF486 LSU ribosomal protein L36p @ LSU ribosomal protein L36p, zinc-independent — —
Azospirillum sp. SherDot2 0.32 MPMX19_01941 Ribosomal silencing factor RsfS 0.65 MPMX19_00300 50S ribosomal protein L36 — —

Not shown: 20 genomes with orthologs for CSW01_04870 only; 17 genomes with orthologs for CSW01_04515 only