Conservation of cofitness between CSW01_03410 and CSW01_03980 in Vibrio cholerae E7946 ATCC 55056

115 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_03410 polyribonucleotide nucleotidyltransferase 1.0 CSW01_03980 IMP dehydrogenase 0.83 7
Pantoea sp. MT58 0.78 IAI47_17005 polyribonucleotide nucleotidyltransferase 0.77 IAI47_05105 IMP dehydrogenase — —
Klebsiella michiganensis M5al 0.77 BWI76_RS25065 polyribonucleotide nucleotidyltransferase 0.76 BWI76_RS21030 IMP dehydrogenase — —
Pantoea agglomerans CFBP13505 P0401 0.77 PagCFBP13505_RS09100 polyribonucleotide nucleotidyltransferase 0.77 PagCFBP13505_RS14995 IMP dehydrogenase — —
Klebsiella pneumoniae MKP103 0.77 KDGMDA_05875 polyribonucleotide nucleotidyltransferase 0.77 KDGMDA_28160 IMP dehydrogenase low > 95
Dickeya dadantii 3937 0.77 DDA3937_RS03090 polyribonucleotide nucleotidyltransferase 0.76 DDA3937_RS15420 IMP dehydrogenase low > 74
Enterobacter asburiae PDN3 0.77 EX28DRAFT_3213 polyribonucleotide nucleotidyltransferase 0.76 EX28DRAFT_0139 inosine-5'-monophosphate dehydrogenase — —
Dickeya dianthicola 67-19 0.77 HGI48_RS03260 polyribonucleotide nucleotidyltransferase 0.76 HGI48_RS15535 IMP dehydrogenase 0.60 30
Dickeya dianthicola ME23 0.77 DZA65_RS03255 polyribonucleotide nucleotidyltransferase 0.76 DZA65_RS16610 IMP dehydrogenase low > 75
Enterobacter sp. TBS_079 0.77 MPMX20_04068 Polyribonucleotide nucleotidyltransferase 0.76 MPMX20_03382 Inosine-5'-monophosphate dehydrogenase — —
Escherichia coli BL21 0.77 ECD_03031 polynucleotide phosphorylase/polyadenylase 0.75 ECD_02400 IMP dehydrogenase low > 61
Escherichia coli BW25113 0.77 b3164 pnp polynucleotide phosphorylase/polyadenylase (RefSeq) 0.75 b2508 guaB inositol-5-monophosphate dehydrogenase (NCBI) — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.77 OHPLBJKB_00536 Polyribonucleotide nucleotidyltransferase 0.75 OHPLBJKB_01201 'Inosine-5'-monophosphate dehydrogenase' transl_table=11 0.61 18
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.77 GFF1502 Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) 0.77 GFF2160 'Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) / CBS domain' transl_table=11 low > 78
Escherichia coli ECRC102 0.77 NIAGMN_15900 pnp polyribonucleotide nucleotidyltransferase 0.75 NIAGMN_19530 guaB IMP dehydrogenase — —
Escherichia coli ECOR38 0.77 HEPCGN_17015 pnp polyribonucleotide nucleotidyltransferase 0.75 HEPCGN_20900 guaB IMP dehydrogenase — —
Escherichia coli ECRC100 0.77 OKFHMN_18140 pnp polyribonucleotide nucleotidyltransferase 0.75 OKFHMN_21760 guaB IMP dehydrogenase low > 79
Escherichia coli ECRC62 0.77 BNILDI_01595 pnp polyribonucleotide nucleotidyltransferase 0.75 BNILDI_12210 guaB IMP dehydrogenase low > 75
Escherichia coli ECRC99 0.77 KEDOAH_10010 pnp polyribonucleotide nucleotidyltransferase 0.75 KEDOAH_06460 guaB IMP dehydrogenase — —
Escherichia coli ECOR27 0.77 NOLOHH_09940 pnp polyribonucleotide nucleotidyltransferase 0.75 NOLOHH_13410 guaB IMP dehydrogenase 0.62 9
Escherichia coli ECRC101 0.77 MCAODC_08660 pnp polyribonucleotide nucleotidyltransferase 0.75 MCAODC_12290 guaB IMP dehydrogenase low > 88
Escherichia coli ECRC98 0.77 JDDGAC_21765 pnp polyribonucleotide nucleotidyltransferase 0.75 JDDGAC_25435 guaB IMP dehydrogenase low > 87
Escherichia coli Nissle 1917 0.77 ECOLIN_RS18175 polyribonucleotide nucleotidyltransferase 0.75 ECOLIN_RS14240 IMP dehydrogenase low > 55
Erwinia tracheiphila HP pepo 2.2 0.77 IJEDHG_13960 pnp polyribonucleotide nucleotidyltransferase 0.76 IJEDHG_02725 guaB IMP dehydrogenase — —
Escherichia fergusonii Becca 0.77 EFB2_00659 Polyribonucleotide nucleotidyltransferase 0.75 EFB2_01385 Inosine-5'-monophosphate dehydrogenase low > 86
Erwinia tracheiphila SCR3 0.77 LU632_RS21040 pnp polyribonucleotide nucleotidyltransferase 0.76 LU632_RS17755 guaB IMP dehydrogenase — —
Rahnella sp. WP5 0.76 EX31_RS08520 polyribonucleotide nucleotidyltransferase 0.76 EX31_RS20450 IMP dehydrogenase low > 89
Erwinia amylovora T8 0.76 OLJFJH_07265 polyribonucleotide nucleotidyltransferase 0.73 OLJFJH_10500 IMP dehydrogenase low > 58
Pectobacterium carotovorum WPP14 0.76 HER17_RS18190 polyribonucleotide nucleotidyltransferase 0.77 HER17_RS06155 IMP dehydrogenase — —
Serratia liquefaciens MT49 0.76 IAI46_01955 polyribonucleotide nucleotidyltransferase 0.77 IAI46_19210 IMP dehydrogenase — —
Shewanella loihica PV-4 0.74 Shew_2822 polynucleotide phosphorylase/polyadenylase (RefSeq) 0.76 Shew_1297 inositol-5-monophosphate dehydrogenase (RefSeq) — —
Shewanella amazonensis SB2B 0.73 Sama_0966 polynucleotide phosphorylase/polyadenylase (RefSeq) 0.77 Sama_2359 inosine 5'-monophosphate dehydrogenase (RefSeq) — —
Alteromonas macleodii MIT1002 0.73 MIT1002_01888 Polyribonucleotide nucleotidyltransferase 0.71 MIT1002_02779 Inosine-5'-monophosphate dehydrogenase — —
Shewanella oneidensis MR-1 0.72 SO1209 pnp polyribonucleotide nucleotidyltransferase (NCBI ptt file) 0.77 SO3293 guaB inosine-5'-monophosphate dehydrogenase (NCBI ptt file) — —
Shewanella sp. ANA-3 0.72 Shewana3_1035 polynucleotide phosphorylase/polyadenylase (RefSeq) 0.78 Shewana3_1235 inosine 5'-monophosphate dehydrogenase (RefSeq) — —
Kangiella aquimarina DSM 16071 0.68 B158DRAFT_0104 polyribonucleotide nucleotidyltransferase 0.70 B158DRAFT_1158 inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) — —
Dechlorosoma suillum PS 0.66 Dsui_2718 polyribonucleotide nucleotidyltransferase 0.63 Dsui_2671 inosine-5''-monophosphate dehydrogenase — —
Herbaspirillum seropedicae SmR1 0.65 HSERO_RS08755 polynucleotide phosphorylase/polyadenylase 0.62 HSERO_RS11015 inosine 5'-monophosphate dehydrogenase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.64 GFF3677 Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) 0.62 GFF4356 Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) — —
Acidovorax sp. GW101-3H11 0.64 Ac3H11_1456 Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) 0.62 Ac3H11_2857 Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) — —
Paraburkholderia graminis OAS925 0.63 ABIE53_001586 polyribonucleotide nucleotidyltransferase 0.63 ABIE53_002478 IMP dehydrogenase — —
Variovorax sp. SCN45 0.63 GFF4746 Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) 0.61 GFF209 Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) / CBS domain — —
Dyella japonica UNC79MFTsu3.2 0.63 ABZR86_RS06005 polyribonucleotide nucleotidyltransferase 0.64 ABZR86_RS05410 IMP dehydrogenase — —
Paraburkholderia bryophila 376MFSha3.1 0.63 H281DRAFT_04562 polyribonucleotide nucleotidyltransferase 0.63 H281DRAFT_00634 inosine-5'-monophosphate dehydrogenase — —
Rhodanobacter sp000427505 FW510-R12 0.63 LRK53_RS09090 polyribonucleotide nucleotidyltransferase 0.62 LRK53_RS11160 IMP dehydrogenase — —
Pseudomonas aeruginosa PA14 0.63 IKLFDK_29900 polyribonucleotide nucleotidyltransferase 0.61 IKLFDK_19415 IMP dehydrogenase — —
Rhodanobacter denitrificans FW104-10B01 0.63 LRK54_RS01025 polyribonucleotide nucleotidyltransferase 0.63 LRK54_RS00105 IMP dehydrogenase — —
Rhodanobacter denitrificans MT42 0.63 LRK55_RS00800 polyribonucleotide nucleotidyltransferase 0.62 LRK55_RS18100 IMP dehydrogenase — —
Variovorax sp. OAS795 0.63 ABID97_RS20520 polyribonucleotide nucleotidyltransferase 0.60 ABID97_RS16415 IMP dehydrogenase — —
Burkholderia phytofirmans PsJN 0.62 BPHYT_RS06600 polynucleotide phosphorylase/polyadenylase 0.62 BPHYT_RS12020 inosine 5'-monophosphate dehydrogenase — —
Rhodanobacter sp. FW510-T8 0.62 OKGIIK_05870 pnp polyribonucleotide nucleotidyltransferase 0.62 OKGIIK_07095 guaB IMP dehydrogenase — —
Xanthomonas campestris pv. campestris strain 8004 0.62 Xcc-8004.2006.1 Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) 0.61 Xcc-8004.2391.1 Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) / CBS domain — —
Paraburkholderia sabiae LMG 24235 0.62 QEN71_RS24175 polyribonucleotide nucleotidyltransferase 0.64 QEN71_RS06540 IMP dehydrogenase — —
Pseudomonas sp. S08-1 0.62 OH686_17165 polyribonucleotide nucleotidyltransferase 0.65 OH686_17590 inosine-5'-monophosphate dehydrogenase — —
Marinobacter adhaerens HP15 0.62 HP15_3063 polynucleotide phosphorylase/polyadenylase 0.64 HP15_2051 inositol-5-monophosphate dehydrogenase — —
Methylophilus sp. DMC18 0.62 GFF2832 Polyribonucleotide nucleotidyltransferase 0.66 GFF1138 Inosine-5'-monophosphate dehydrogenase — —
Pseudomonas stutzeri RCH2 0.61 Psest_0986 polyribonucleotide nucleotidyltransferase 0.64 Psest_1286 inosine-5'-monophosphate dehydrogenase — —
Pseudomonas sp. SVBP6 0.61 COO64_RS15150 pnp polyribonucleotide nucleotidyltransferase 0.63 COO64_RS04660 guaB IMP dehydrogenase — —
Pseudomonas fluorescens FW300-N2C3 0.61 AO356_07390 polyribonucleotide nucleotidyltransferase 0.65 AO356_06525 inosine-5'-monophosphate dehydrogenase — —
Cupriavidus basilensis FW507-4G11 0.61 RR42_RS05485 polynucleotide phosphorylase/polyadenylase 0.62 RR42_RS11750 inosine-5-monophosphate dehydrogenase — —
Pseudomonas sp. BP01 0.61 JOY50_RS26855 pnp polyribonucleotide nucleotidyltransferase 0.64 JOY50_RS11500 guaB IMP dehydrogenase — —
Ralstonia solanacearum GMI1000 0.61 RS_RS10375 polyribonucleotide nucleotidyltransferase 0.63 RS_RS07170 IMP dehydrogenase — —
Pseudomonas fluorescens FW300-N2E2 0.61 Pf6N2E2_3349 Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) 0.65 Pf6N2E2_3165 Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) / CBS domain — —
Pseudomonas putida KT2440 0.61 PP_4708 Polyribonucleotide nucleotidyltransferase 0.64 PP_1031 IMP dehydrogenase and single strand DNA binding factor — —
Pseudomonas fluorescens FW300-N1B4 0.61 Pf1N1B4_1156 Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) 0.64 Pf1N1B4_840 Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) / CBS domain — —
Ralstonia solanacearum UW163 0.61 UW163_RS10720 polyribonucleotide nucleotidyltransferase 0.63 UW163_RS13845 IMP dehydrogenase — —
Ralstonia solanacearum IBSBF1503 0.61 RALBFv3_RS03005 polyribonucleotide nucleotidyltransferase 0.63 RALBFv3_RS00515 IMP dehydrogenase — —
Pseudomonas sp. RS175 0.61 PFR28_00094 Polyribonucleotide nucleotidyltransferase 0.65 PFR28_00310 'Inosine-5'-monophosphate dehydrogenase' transl_table=11 — —
Lysobacter sp. OAE881 0.61 ABIE51_RS08415 polyribonucleotide nucleotidyltransferase 0.59 ABIE51_RS09475 IMP dehydrogenase — —
Ralstonia sp. UNC404CL21Col 0.61 ABZR87_RS14910 polyribonucleotide nucleotidyltransferase 0.61 ABZR87_RS11965 IMP dehydrogenase — —
Pseudomonas fluorescens GW456-L13 0.61 PfGW456L13_5084 Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) 0.63 PfGW456L13_4818 Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) / CBS domain — —
Pseudomonas syringae pv. syringae B728a 0.61 Psyr_4176 Polyribonucleotide nucleotidyltransferase 0.65 Psyr_1261 inosine-5'-monophosphate dehydrogenase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.61 Psyr_4176 Polyribonucleotide nucleotidyltransferase 0.65 Psyr_1261 inosine-5'-monophosphate dehydrogenase — —
Ralstonia solanacearum PSI07 0.61 RPSI07_RS14305 polyribonucleotide nucleotidyltransferase 0.63 RPSI07_RS16975 IMP dehydrogenase — —
Pseudomonas fluorescens FW300-N2E3 0.61 AO353_05540 polyribonucleotide nucleotidyltransferase 0.64 AO353_15950 inosine-5'-monophosphate dehydrogenase — —
Pseudomonas sp. DMC3 0.61 GFF4992 Polyribonucleotide nucleotidyltransferase 0.65 GFF4327 Inosine-5'-monophosphate dehydrogenase — —
Castellaniella sp019104865 MT123 0.60 ABCV34_RS01240 polyribonucleotide nucleotidyltransferase 0.61 ABCV34_RS04905 IMP dehydrogenase — —
Pseudomonas segetis P6 0.60 MPMX49_01205 Polyribonucleotide nucleotidyltransferase 0.68 MPMX49_01540 Inosine-5'-monophosphate dehydrogenase — —
Pseudomonas simiae WCS417 0.59 PS417_23950 polynucleotide phosphorylase/polyadenylase 0.64 PS417_23075 inosine-5-monophosphate dehydrogenase — —
Pseudomonas lactucae CFBP13502 0.59 GEMAOFIL_04941 Polyribonucleotide nucleotidyltransferase 0.63 GEMAOFIL_04768 'Inosine-5'-monophosphate dehydrogenase' transl_table=11 — —
Pseudomonas fluorescens SBW25 0.59 PFLU_RS25790 polyribonucleotide nucleotidyltransferase 0.64 PFLU_RS24735 IMP dehydrogenase — —
Pseudomonas fluorescens SBW25-INTG 0.59 PFLU_RS25790 polyribonucleotide nucleotidyltransferase 0.64 PFLU_RS24735 IMP dehydrogenase — —
Acinetobacter radioresistens SK82 0.58 MPMX26_00275 Polyribonucleotide nucleotidyltransferase 0.62 MPMX26_02920 Inosine-5'-monophosphate dehydrogenase — —
Acinetobacter baumannii LAC-4 0.58 RR41_RS17185 polyribonucleotide nucleotidyltransferase 0.61 RR41_RS00905 IMP dehydrogenase — —
Magnetospirillum magneticum AMB-1 0.56 AMB_RS20820 polyribonucleotide nucleotidyltransferase 0.59 AMB_RS19150 IMP dehydrogenase — —
Rhodospirillum rubrum S1H 0.55 Rru_A3785 3' exoribonuclease (NCBI) 0.54 Rru_A0244 IMP dehydrogenase (NCBI) — —
Agrobacterium fabrum C58 0.55 Atu0082 polyribonucleotide nucleotidyltransferase 0.48 Atu0624 inosine-5`-monophosphate dehydrogenase — —
Azospirillum brasilense Sp245 0.55 AZOBR_RS01385 polynucleotide phosphorylase 0.60 AZOBR_RS16110 inosine-5`-monophosphate dehydrogenase — —
Rhizobium sp. OAE497 0.55 ABIE40_RS00355 polyribonucleotide nucleotidyltransferase 0.55 ABIE40_RS03465 IMP dehydrogenase — —
Sinorhizobium meliloti 1021 0.55 SMc00324 polynucleotide phosphorylase/polyadenylase 0.53 SMc00815 inosine 5'-monophosphate dehydrogenase — —
Azospirillum sp. SherDot2 0.54 MPMX19_02526 Polyribonucleotide nucleotidyltransferase 0.61 MPMX19_01690 Inosine-5'-monophosphate dehydrogenase — —
Bosea sp. OAE506 0.54 ABIE41_RS04595 polyribonucleotide nucleotidyltransferase 0.56 ABIE41_RS15185 IMP dehydrogenase — —
Caulobacter crescentus NA1000 0.54 CCNA_00033 polyribonucleotide nucleotidyltransferase/polynucleotide adenylyltransferase 0.55 CCNA_01689 inosine-5'-monophosphate dehydrogenase — —
Caulobacter crescentus NA1000 Δfur 0.54 CCNA_00033 polyribonucleotide nucleotidyltransferase/polynucleotide adenylyltransferase 0.55 CCNA_01689 inosine-5'-monophosphate dehydrogenase — —
Xanthobacter sp. DMC5 0.54 GFF2302 Polyribonucleotide nucleotidyltransferase 0.54 GFF3547 Inosine-5'-monophosphate dehydrogenase — —
Sphingomonas koreensis DSMZ 15582 0.54 Ga0059261_2140 polyribonucleotide nucleotidyltransferase 0.53 Ga0059261_0893 inosine-5'-monophosphate dehydrogenase — —
Dinoroseobacter shibae DFL-12 0.53 Dshi_2997 Polyribonucleotide nucleotidyltransferase (RefSeq) 0.62 Dshi_1646 inosine-5'-monophosphate dehydrogenase (RefSeq) — —
Rhodopseudomonas palustris CGA009 0.53 TX73_002245 polyribonucleotide nucleotidyltransferase 0.56 TX73_011355 IMP dehydrogenase — —
Brevundimonas sp. GW460-12-10-14-LB2 0.53 A4249_RS13355 polyribonucleotide nucleotidyltransferase 0.56 A4249_RS03025 IMP dehydrogenase — —
Sphingobium sp. HT1-2 0.53 GFF2343 Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) 0.55 GFF2000 'Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) / CBS domain' transl_table=11 — —
Phaeobacter inhibens DSM 17395 0.52 PGA1_c33000 polyribonucleotide nucleotidyltransferase Pnp 0.60 PGA1_c15220 inosine-5'-monophosphate dehydrogenase GuaB — —
Fusobacterium nucleatum SB010 0.45 HUW76_01280 polyribonucleotide nucleotidyltransferase 0.56 HUW76_04090 IMP dehydrogenase — —
Desulfovibrio vulgaris Miyazaki F 0.43 DvMF_2508 polynucleotide phosphorylase/polyadenylase (RefSeq) 0.54 DvMF_3126 inosine-5'-monophosphate dehydrogenase (RefSeq) — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.40 CA264_04880 polyribonucleotide nucleotidyltransferase 0.56 CA264_19750 IMP dehydrogenase — —
Desulfovibrio vulgaris Hildenborough JW710 0.40 DVU0503 pnp polyribonucleotide nucleotidyltransferase (TIGR) 0.55 DVU1044 guaB inosine-5`-monophosphate dehydrogenase (TIGR) — —
Bacteroides thetaiotaomicron VPI-5482 0.40 BT2563 polyribonucleotide nucleotidyltransferase (NCBI ptt file) 0.52 BT3845 inosine-5'-monophosphate dehydrogenase (NCBI ptt file) — —
Phocaeicola dorei CL03T12C01 0.40 ABI39_RS04155 polyribonucleotide nucleotidyltransferase 0.52 ABI39_RS02315 IMP dehydrogenase — —
Phocaeicola vulgatus CL09T03C04 0.40 HMPREF1058_RS12555 polyribonucleotide nucleotidyltransferase 0.52 HMPREF1058_RS03000 IMP dehydrogenase — —
Bacteroides ovatus ATCC 8483 0.40 BACOVA_01641 polyribonucleotide nucleotidyltransferase 0.54 BACOVA_00338 inosine-5'-monophosphate dehydrogenase — —
Bacteroides stercoris CC31F 0.40 HMPREF1181_RS00815 polyribonucleotide nucleotidyltransferase 0.52 HMPREF1181_RS07435 IMP dehydrogenase — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.39 Echvi_3436 polyribonucleotide nucleotidyltransferase 0.53 Echvi_1111 inosine-5'-monophosphate dehydrogenase — —
Mycobacterium tuberculosis H37Rv 0.39 Rv2783c Bifunctional protein polyribonucleotide nucleotidyltransferase GpsI: guanosine pentaphosphate synthetase + polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) (pnpase) 0.50 Rv3411c Probable inosine-5'-monophosphate dehydrogenase GuaB2 (imp dehydrogenase) (inosinic acid dehydrogenase) (inosinate dehydrogenase) (imp oxidoreductase) (inosine-5'-monophosphate oxidoreductase) (IMPDH) (IMPD) — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.39 ABZR88_RS06490 polyribonucleotide nucleotidyltransferase 0.53 ABZR88_RS10330 IMP dehydrogenase — —
Pedobacter sp. GW460-11-11-14-LB5 0.39 CA265_RS08985 polyribonucleotide nucleotidyltransferase 0.55 CA265_RS10675 IMP dehydrogenase — —
Parabacteroides merdae CL09T00C40 0.38 HMPREF1078_RS17715 polyribonucleotide nucleotidyltransferase 0.24 HMPREF1078_RS14285 IMP dehydrogenase — —
Cellulophaga baltica 18 0.36 M666_RS08550 polyribonucleotide nucleotidyltransferase 0.52 M666_RS19055 IMP dehydrogenase low > 67

Not shown: 2 genomes with orthologs for CSW01_03410 only; 3 genomes with orthologs for CSW01_03980 only