| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_00430 | | NAD(P)/FAD-dependent oxidoreductase | 1.0 | CSW01_03525 | | phosphoenolpyruvate-protein phosphotransferase PtsP | 0.66 | 1 |
| Shewanella sp. ANA-3 | 0.62 | Shewana3_0055 | | hypothetical protein (RefSeq) | 0.42 | Shewana3_3042 | | phosphoenolpyruvate-protein phosphotransferase PtsP (RefSeq) | low | > 73 |
| Alteromonas macleodii MIT1002 | 0.61 | MIT1002_00118 | | N-methyltryptophan oxidase | 0.41 | MIT1002_00648 | | Phosphoenolpyruvate-protein phosphotransferase | low | > 70 |
| Pantoea agglomerans CFBP13505 P0401 | 0.61 | PagCFBP13505_RS17875 | | NAD(P)/FAD-dependent oxidoreductase | 0.48 | PagCFBP13505_RS17045 | | phosphoenolpyruvate--protein phosphotransferase | low | > 74 |
| Shewanella loihica PV-4 | 0.61 | Shew_3802 | | hypothetical protein (RefSeq) | 0.42 | Shew_1039 | | phosphoenolpyruvate-protein phosphotransferase PtsP (RefSeq) | low | > 60 |
| Shewanella oneidensis MR-1 | 0.61 | SO0054 | | conserved hypothetical protein TIGR00275 (NCBI ptt file) | 0.41 | SO1332 | ptsP | phosphoenolpyruvate-protein phosphotransferase PtsP (NCBI ptt file) | low | > 76 |
| Dickeya dianthicola 67-19 | 0.60 | HGI48_RS21025 | | NAD(P)/FAD-dependent oxidoreductase | 0.47 | HGI48_RS04960 | | phosphoenolpyruvate--protein phosphotransferase | low | > 71 |
| Pantoea sp. MT58 | 0.60 | IAI47_01370 | | NAD(P)/FAD-dependent oxidoreductase | 0.48 | IAI47_03920 | | phosphoenolpyruvate--protein phosphotransferase | low | > 76 |
| Shewanella amazonensis SB2B | 0.60 | Sama_0064 | | hypothetical protein (RefSeq) | 0.42 | Sama_0864 | | phosphoenolpyruvate-protein phosphotransferase PtsP (RefSeq) | low | > 62 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.59 | GFF523 | | NAD(FAD)-utilizing dehydrogenases | 0.48 | GFF1311 | | FIG001592: Phosphocarrier protein kinase/phosphorylase, nitrogen regulation associated | low | > 78 |
| Rahnella sp. WP5 | 0.59 | EX31_RS05140 | | NAD(P)/FAD-dependent oxidoreductase | 0.48 | EX31_RS13200 | | phosphoenolpyruvate--protein phosphotransferase | low | > 89 |
| Pectobacterium carotovorum WPP14 | 0.59 | HER17_RS21340 | | NAD(P)/FAD-dependent oxidoreductase | 0.46 | HER17_RS16580 | | phosphoenolpyruvate--protein phosphotransferase | low | > 75 |
| Dickeya dianthicola ME23 | 0.59 | DZA65_RS22010 | | NAD(P)/FAD-dependent oxidoreductase | 0.47 | DZA65_RS05300 | | phosphoenolpyruvate--protein phosphotransferase | low | > 75 |
| Dickeya dadantii 3937 | 0.58 | DDA3937_RS00340 | | NAD(P)/FAD-dependent oxidoreductase | 0.47 | DDA3937_RS04950 | | phosphoenolpyruvate--protein phosphotransferase | low | > 74 |
| Serratia liquefaciens MT49 | 0.58 | IAI46_24145 | | NAD(P)/FAD-dependent oxidoreductase | 0.50 | IAI46_20450 | | phosphoenolpyruvate--protein phosphotransferase | low | > 86 |
| Erwinia tracheiphila SCR3 | 0.58 | LU632_RS19445 | | NAD(P)/FAD-dependent oxidoreductase | 0.48 | LU632_RS06110 | ptsP | phosphoenolpyruvate--protein phosphotransferase | low | > 74 |
| Erwinia tracheiphila HP pepo 2.2 | 0.58 | IJEDHG_12610 | | aminoacetone oxidase family FAD-binding enzyme | 0.48 | IJEDHG_17120 | ptsP | phosphoenolpyruvate--protein phosphotransferase | low | > 61 |
| Erwinia amylovora T8 | 0.58 | OLJFJH_04505 | | aminoacetone oxidase family FAD-binding enzyme | 0.48 | OLJFJH_09055 | | phosphoenolpyruvate--protein phosphotransferase | low | > 58 |
| Escherichia coli BW25113 | 0.58 | b3492 | yhiN | predicted oxidoreductase with FAD/NAD(P)-binding domain (NCBI) | 0.48 | b2829 | ptsP | fused PTS enzyme: PEP-protein phosphotransferase (enzyme I)/GAF domain containing protein (NCBI) | low | > 76 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.58 | OHPLBJKB_00211 | | hypothetical protein | 0.48 | OHPLBJKB_00901 | | Phosphoenolpyruvate-dependent phosphotransferase system | low | > 74 |
| Escherichia coli ECOR27 | 0.58 | NOLOHH_08380 | yhiN | Uncharacterized protein YhiN | 0.48 | NOLOHH_11890 | ptsP | phosphoenolpyruvate--protein phosphotransferase | low | > 76 |
| Escherichia coli ECRC99 | 0.58 | KEDOAH_11700 | yhiN | Uncharacterized protein YhiN | 0.48 | KEDOAH_08125 | ptsP | phosphoenolpyruvate--protein phosphotransferase | — | — |
| Escherichia coli ECOR38 | 0.58 | HEPCGN_15360 | yhiN | Uncharacterized protein YhiN | 0.48 | HEPCGN_19260 | ptsP | phosphoenolpyruvate--protein phosphotransferase | low | > 88 |
| Escherichia coli ECRC98 | 0.58 | JDDGAC_20075 | yhiN | Uncharacterized protein YhiN | 0.48 | JDDGAC_23670 | ptsP | phosphoenolpyruvate--protein phosphotransferase | low | > 87 |
| Escherichia coli ECRC100 | 0.58 | OKFHMN_16445 | yhiN | Uncharacterized protein YhiN | 0.48 | OKFHMN_20005 | ptsP | phosphoenolpyruvate--protein phosphotransferase | low | > 79 |
| Escherichia coli ECRC102 | 0.58 | NIAGMN_14210 | yhiN | Uncharacterized protein YhiN | 0.48 | NIAGMN_17775 | ptsP | phosphoenolpyruvate--protein phosphotransferase | low | > 80 |
| Enterobacter sp. TBS_079 | 0.58 | MPMX20_04392 | | hypothetical protein | 0.48 | MPMX20_03692 | | Phosphoenolpyruvate-dependent phosphotransferase system | low | > 85 |
| Escherichia coli ECRC101 | 0.58 | MCAODC_06960 | yhiN | Uncharacterized protein YhiN | 0.48 | MCAODC_10530 | ptsP | phosphoenolpyruvate--protein phosphotransferase | low | > 88 |
| Enterobacter asburiae PDN3 | 0.58 | EX28DRAFT_4070 | | flavoprotein, HI0933 family | 0.48 | EX28DRAFT_2904 | | phosphoenolpyruvate-protein phosphotransferase | low | > 76 |
| Escherichia coli BL21 | 0.58 | ECD_03341 | | putative oxidoreductase | 0.48 | ECD_02677 | | PEP-protein phosphotransferase enzyme I; GAF domain containing protein | low | > 61 |
| Escherichia coli ECRC62 | 0.58 | BNILDI_03180 | yhiN | Uncharacterized protein YhiN | 0.48 | BNILDI_10370 | ptsP | phosphoenolpyruvate--protein phosphotransferase | 0.75 | 8 |
| Escherichia coli Nissle 1917 | 0.58 | ECOLIN_RS19955 | | NAD(P)/FAD-dependent oxidoreductase | 0.48 | ECOLIN_RS15875 | | phosphoenolpyruvate--protein phosphotransferase | low | > 55 |
| Escherichia fergusonii Becca | 0.58 | EFB2_00323 | | hypothetical protein | 0.48 | EFB2_01055 | | Phosphoenolpyruvate-dependent phosphotransferase system | low | > 86 |
| Klebsiella michiganensis M5al | 0.57 | BWI76_RS26565 | | membrane protein | 0.46 | BWI76_RS23270 | | phosphoenolpyruvate--protein phosphotransferase PtsP | low | > 92 |
| Klebsiella pneumoniae MKP103 | 0.57 | KDGMDA_07395 | | aminoacetone oxidase family FAD-binding enzyme | 0.47 | KDGMDA_03855 | | phosphoenolpyruvate--protein phosphotransferase | low | > 95 |
| Pseudomonas stutzeri RCH2 | 0.56 | Psest_0341 | | flavoprotein, HI0933 family | 0.41 | Psest_3862 | | phosphoenolpyruvate-protein phosphotransferase | low | > 67 |
| Pseudomonas sp. DMC3 | 0.55 | GFF143 | | putative protein | 0.41 | GFF264 | | Phosphoenolpyruvate-dependent phosphotransferase system | low | > 89 |
| Pseudomonas aeruginosa PA14 | 0.55 | IKLFDK_22630 | | NAD(P)/FAD-dependent oxidoreductase | 0.41 | IKLFDK_23750 | | phosphoenolpyruvate--protein phosphotransferase | low | > 100 |
| Pseudomonas sp. RS175 | 0.54 | PFR28_04173 | | hypothetical protein | 0.41 | PFR28_04830 | | Phosphoenolpyruvate-dependent phosphotransferase system | low | > 88 |
| Pseudomonas segetis P6 | 0.54 | MPMX49_00673 | | hypothetical protein | 0.41 | MPMX49_00587 | | Phosphoenolpyruvate-dependent phosphotransferase system | low | > 75 |
| Pseudomonas fluorescens FW300-N2C3 | 0.54 | AO356_13765 | | hypothetical protein | 0.41 | AO356_10350 | | phosphoenolpyruvate-protein phosphotransferase | low | > 104 |
| Pseudomonas fluorescens FW300-N1B4 | 0.54 | Pf1N1B4_2411 | | FIG00953568: hypothetical protein | 0.41 | Pf1N1B4_2284 | | FIG001592: Phosphocarrier protein kinase/phosphorylase, nitrogen regulation associated | low | > 87 |
| Pseudomonas fluorescens FW300-N2E2 | 0.54 | Pf6N2E2_4672 | | FIG00953568: hypothetical protein | 0.41 | Pf6N2E2_3942 | | FIG001592: Phosphocarrier protein kinase/phosphorylase, nitrogen regulation associated | low | > 103 |
| Pseudomonas simiae WCS417 | 0.54 | PS417_26375 | | membrane protein | 0.41 | PS417_26985 | | phosphoenolpyruvate-protein phosphotransferase | low | > 88 |
| Pseudomonas fluorescens SBW25-INTG | 0.54 | PFLU_RS28025 | | NAD(P)/FAD-dependent oxidoreductase | 0.42 | PFLU_RS28645 | | phosphoenolpyruvate--protein phosphotransferase | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.54 | PFLU_RS28025 | | NAD(P)/FAD-dependent oxidoreductase | 0.42 | PFLU_RS28645 | | phosphoenolpyruvate--protein phosphotransferase | low | > 109 |
| Pseudomonas fluorescens FW300-N2E3 | 0.53 | AO353_07855 | | hypothetical protein | 0.41 | AO353_08465 | | phosphoenolpyruvate-protein phosphotransferase | low | > 101 |
| Pseudomonas lactucae CFBP13502 | 0.53 | GEMAOFIL_05401 | | hypothetical protein | 0.42 | GEMAOFIL_05538 | | Phosphoenolpyruvate-dependent phosphotransferase system | low | > 93 |
| Pseudomonas fluorescens GW456-L13 | 0.53 | PfGW456L13_1077 | | FIG00953568: hypothetical protein | 0.41 | PfGW456L13_953 | | FIG001592: Phosphocarrier protein kinase/phosphorylase, nitrogen regulation associated | low | > 87 |
| Pseudomonas sp. S08-1 | 0.53 | OH686_10655 | | Uncharacterized protein YhiN | 0.41 | OH686_11430 | | Phosphocarrier protein kinase/phosphorylase, nitrogen regulation associated | low | > 80 |
| Sinorhizobium meliloti 1021 | 0.53 | SMc00763 | | hypothetical protein | 0.25 | SMc02437 | | phosphoenolpyruvate phosphotransferase PTSP (enzyme I-Ntr) protein | — | — |
| Pseudomonas putida KT2440 | 0.52 | PP_4953 | | putative oxidoreductase with FAD/NAD(P)-binding domain | 0.41 | PP_5145 | | phosphoenolpyruvate-dependent regulator (with NPR and NTR proteins) | low | > 96 |
| Pseudomonas sp. BP01 | 0.52 | JOY50_RS09930 | | NAD(P)/FAD-dependent oxidoreductase | 0.41 | JOY50_RS20665 | ptsP | phosphoenolpyruvate--protein phosphotransferase | low | > 84 |
| Marinobacter adhaerens HP15 | 0.52 | HP15_1033 | | flavoprotein, NADB Rossmann superfamily | 0.41 | HP15_463 | | fused phosphoenolpyruvate-protein phosphotransferase PtsP/GAF domain protein | low | > 73 |
| Pseudomonas syringae pv. syringae B728a | 0.52 | Psyr_0515 | | HI0933-like protein | 0.41 | Psyr_4842 | | Phosphoenolpyruvate-protein phosphotransferase | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.52 | Psyr_0515 | | HI0933-like protein | 0.41 | Psyr_4842 | | Phosphoenolpyruvate-protein phosphotransferase | low | > 86 |
| Rhizobium sp. OAE497 | 0.52 | ABIE40_RS03215 | | NAD(P)/FAD-dependent oxidoreductase | 0.25 | ABIE40_RS17300 | | phosphoenolpyruvate--protein phosphotransferase | — | — |
| Pseudomonas sp. SVBP6 | 0.51 | COO64_RS17615 | | NAD(P)/FAD-dependent oxidoreductase | 0.41 | COO64_RS12700 | ptsP | phosphoenolpyruvate--protein phosphotransferase | low | > 93 |
| Caulobacter crescentus NA1000 | 0.51 | CCNA_01545 | | NAD(FAD)-utilizing dehydrogenase | 0.25 | CCNA_00892 | | phosphoenolpyruvate-protein phosphotransferase PtsP | low | > 66 |
| Caulobacter crescentus NA1000 Δfur | 0.51 | CCNA_01545 | | NAD(FAD)-utilizing dehydrogenase | 0.25 | CCNA_00892 | | phosphoenolpyruvate-protein phosphotransferase PtsP | low | > 67 |
| Magnetospirillum magneticum AMB-1 | 0.50 | AMB_RS17480 | | NAD(P)/FAD-dependent oxidoreductase | 0.24 | AMB_RS08150 | | phosphoenolpyruvate--protein phosphotransferase | low | > 64 |
| Agrobacterium fabrum C58 | 0.49 | Atu0603 | | hypothetical protein | 0.25 | Atu4173 | | phosphoenolpyruvate-protein phosphotransferase | low | > 89 |
| Phaeobacter inhibens DSM 17395 | 0.48 | PGA1_c09590 | | uncharacterized protein YhiN | 0.22 | PGA1_c23500 | | phosphoenolpyruvate-protein phosphotransferase PtsP | low | > 62 |
| Acinetobacter baumannii LAC-4 | 0.48 | RR41_RS15405 | | NAD(P)/FAD-dependent oxidoreductase | 0.38 | RR41_RS16935 | | phosphoenolpyruvate--protein phosphotransferase | low | > 55 |
| Sphingomonas koreensis DSMZ 15582 | 0.48 | Ga0059261_3388 | | flavoprotein, HI0933 family | 0.22 | Ga0059261_2514 | | phosphoenolpyruvate-protein phosphotransferase | low | > 68 |
| Acinetobacter radioresistens SK82 | 0.46 | MPMX26_02534 | | hypothetical protein | 0.38 | MPMX26_00341 | | Phosphoenolpyruvate-dependent phosphotransferase system | low | > 36 |
| Sphingobium sp. HT1-2 | 0.44 | GFF1279 | | Uncharacterized protein YhiN | 0.24 | GFF2007 | | Phosphoenolpyruvate-protein phosphotransferase, nitrogen regulation associated | low | > 95 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.42 | A4249_RS12180 | | NAD(P)/FAD-dependent oxidoreductase | 0.25 | A4249_RS14485 | | phosphoenolpyruvate--protein phosphotransferase | low | > 48 |
| Dinoroseobacter shibae DFL-12 | 0.42 | Dshi_2710 | | HI0933 family protein (RefSeq) | 0.22 | Dshi_2062 | | PTSINtr with GAF domain, PtsP (RefSeq) | low | > 64 |
| Azospirillum sp. SherDot2 | 0.11 | MPMX19_00024 | | 3-dehydro-bile acid delta(4,6)-reductase | 0.23 | MPMX19_02675 | | Phosphoenolpyruvate-dependent phosphotransferase system | low | > 112 |
| Rhodopseudomonas palustris CGA009 | 0.10 | TX73_011285 | | NAD(P)/FAD-dependent oxidoreductase | 0.25 | TX73_003130 | | phosphoenolpyruvate--protein phosphotransferase | low | > 86 |
| Azospirillum brasilense Sp245 | 0.09 | AZOBR_RS02525 | | NAD(FAD)-utilizing dehydrogenase | 0.23 | AZOBR_RS18900 | | peptidase | low | > 97 |
Not shown: 32 genomes with orthologs for CSW01_00430 only; 3 genomes with orthologs for CSW01_03525 only