| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_03620 | | beta-hexosaminidase | 1.0 | CSW01_03320 | | serine-type D-Ala-D-Ala carboxypeptidase | 0.52 | 6 |
| Dickeya dianthicola ME23 | 0.57 | DZA65_RS13585 | | beta-N-acetylhexosaminidase | 0.32 | DZA65_RS03175 | | serine-type D-Ala-D-Ala carboxypeptidase | low | > 75 |
| Dickeya dianthicola 67-19 | 0.57 | HGI48_RS13115 | | beta-N-acetylhexosaminidase | 0.32 | HGI48_RS03180 | | serine-type D-Ala-D-Ala carboxypeptidase | low | > 71 |
| Klebsiella pneumoniae MKP103 | 0.56 | KDGMDA_18760 | | beta-N-acetylhexosaminidase | 0.33 | KDGMDA_05980 | | serine-type D-Ala-D-Ala carboxypeptidase | low | > 95 |
| Dickeya dadantii 3937 | 0.56 | DDA3937_RS13050 | | beta-N-acetylhexosaminidase | 0.32 | DDA3937_RS03010 | | serine-type D-Ala-D-Ala carboxypeptidase | low | > 74 |
| Pectobacterium carotovorum WPP14 | 0.56 | HER17_RS08725 | | beta-N-acetylhexosaminidase | 0.32 | HER17_RS18335 | | serine-type D-Ala-D-Ala carboxypeptidase | low | > 75 |
| Escherichia coli BW25113 | 0.56 | b1107 | nagZ | beta-hexosaminidase (NCBI) | 0.32 | b3182 | dacB | D-alanyl-D-alanine carboxypeptidase (NCBI) | low | > 76 |
| Enterobacter sp. TBS_079 | 0.56 | MPMX20_01788 | | Beta-hexosaminidase | 0.32 | MPMX20_04086 | | D-alanyl-D-alanine carboxypeptidase DacB | low | > 85 |
| Escherichia fergusonii Becca | 0.55 | EFB2_02868 | | Beta-hexosaminidase | 0.32 | EFB2_00641 | | D-alanyl-D-alanine carboxypeptidase DacB | low | > 86 |
| Escherichia coli ECRC101 | 0.55 | MCAODC_22865 | nagZ | beta-N-acetylhexosaminidase | 0.32 | MCAODC_08560 | dacB | serine-type D-Ala-D-Ala carboxypeptidase | low | > 88 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.55 | OHPLBJKB_02559 | | Beta-hexosaminidase | 0.32 | OHPLBJKB_00518 | | D-alanyl-D-alanine carboxypeptidase DacB | low | > 74 |
| Escherichia coli ECRC102 | 0.55 | NIAGMN_24325 | nagZ | beta-N-acetylhexosaminidase | 0.32 | NIAGMN_15800 | dacB | serine-type D-Ala-D-Ala carboxypeptidase | low | > 80 |
| Escherichia coli ECRC99 | 0.55 | KEDOAH_24250 | nagZ | beta-N-acetylhexosaminidase | 0.32 | KEDOAH_10110 | dacB | serine-type D-Ala-D-Ala carboxypeptidase | — | — |
| Escherichia coli ECRC100 | 0.55 | OKFHMN_03505 | nagZ | beta-N-acetylhexosaminidase | 0.32 | OKFHMN_18040 | dacB | serine-type D-Ala-D-Ala carboxypeptidase | low | > 79 |
| Escherichia coli ECRC98 | 0.55 | JDDGAC_07165 | nagZ | beta-N-acetylhexosaminidase | 0.32 | JDDGAC_21665 | dacB | serine-type D-Ala-D-Ala carboxypeptidase | low | > 87 |
| Escherichia coli ECRC62 | 0.55 | BNILDI_19195 | nagZ | beta-N-acetylhexosaminidase | 0.32 | BNILDI_01695 | dacB | serine-type D-Ala-D-Ala carboxypeptidase | low | > 75 |
| Escherichia coli ECOR38 | 0.55 | HEPCGN_23980 | nagZ | beta-N-acetylhexosaminidase | 0.32 | HEPCGN_16915 | dacB | serine-type D-Ala-D-Ala carboxypeptidase | low | > 88 |
| Escherichia coli ECOR27 | 0.55 | NOLOHH_21035 | nagZ | beta-N-acetylhexosaminidase | 0.32 | NOLOHH_09840 | dacB | serine-type D-Ala-D-Ala carboxypeptidase | low | > 76 |
| Escherichia coli BL21 | 0.55 | ECD_01103 | | beta N-acetyl-glucosaminidase | 0.32 | ECD_03047 | | D-alanyl-D-alanine carboxypeptidase | low | > 61 |
| Serratia liquefaciens MT49 | 0.55 | IAI46_09900 | | beta-N-acetylhexosaminidase | 0.31 | IAI46_01875 | | serine-type D-Ala-D-Ala carboxypeptidase | 0.61 | 33 |
| Escherichia coli Nissle 1917 | 0.55 | ECOLIN_RS06390 | | beta-N-acetylhexosaminidase | 0.32 | ECOLIN_RS18325 | | serine-type D-Ala-D-Ala carboxypeptidase | low | > 55 |
| Klebsiella michiganensis M5al | 0.55 | BWI76_RS11165 | | beta-N-acetylhexosaminidase | 0.32 | BWI76_RS25165 | | serine-type D-Ala-D-Ala carboxypeptidase | low | > 92 |
| Enterobacter asburiae PDN3 | 0.55 | EX28DRAFT_1823 | | Beta-glucosidase-related glycosidases | 0.32 | EX28DRAFT_3234 | | D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family | low | > 76 |
| Erwinia tracheiphila HP pepo 2.2 | 0.54 | IJEDHG_00590 | nagZ | beta-N-acetylhexosaminidase | 0.31 | IJEDHG_13860 | dacB | serine-type D-Ala-D-Ala carboxypeptidase | low | > 61 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.54 | GFF3390 | | Beta N-acetyl-glucosaminidase (EC 3.2.1.52) | 0.32 | GFF2924 | | D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) | low | > 78 |
| Erwinia amylovora T8 | 0.54 | OLJFJH_15465 | | beta-N-acetylhexosaminidase | 0.31 | OLJFJH_07180 | | serine-type D-Ala-D-Ala carboxypeptidase | low | > 58 |
| Erwinia tracheiphila SCR3 | 0.53 | LU632_RS14755 | nagZ | beta-N-acetylhexosaminidase | 0.31 | LU632_RS21170 | dacB | serine-type D-Ala-D-Ala carboxypeptidase | low | > 74 |
| Pantoea agglomerans CFBP13505 P0401 | 0.53 | PagCFBP13505_RS05340 | | beta-N-acetylhexosaminidase | 0.31 | PagCFBP13505_RS09180 | | serine-type D-Ala-D-Ala carboxypeptidase | low | > 74 |
| Pantoea sp. MT58 | 0.53 | IAI47_11995 | | beta-N-acetylhexosaminidase | 0.32 | IAI47_17085 | | serine-type D-Ala-D-Ala carboxypeptidase | low | > 76 |
| Rahnella sp. WP5 | 0.50 | EX31_RS24500 | | beta-N-acetylhexosaminidase | 0.31 | EX31_RS08600 | | serine-type D-Ala-D-Ala carboxypeptidase | low | > 89 |
| Shewanella oneidensis MR-1 | 0.41 | SO2250 | nagZ | beta-hexosaminidase (NCBI ptt file) | 0.24 | SO2394 | dacB | penicillin-binding protein 4 (NCBI ptt file) | low | > 76 |
| Pseudomonas segetis P6 | 0.40 | MPMX49_02985 | | Beta-hexosaminidase | 0.08 | MPMX49_03024 | | D-alanyl-D-alanine carboxypeptidase DacC | low | > 75 |
| Pseudomonas fluorescens GW456-L13 | 0.40 | PfGW456L13_4031 | | Beta N-acetyl-glucosaminidase (EC 3.2.1.52) | 0.07 | PfGW456L13_4091 | | D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) | low | > 87 |
| Pseudomonas fluorescens FW300-N2E3 | 0.40 | AO353_00455 | | beta-hexosaminidase | 0.07 | AO353_00765 | | D-alanyl-D-alanine carboxypeptidase | low | > 101 |
| Pseudomonas lactucae CFBP13502 | 0.40 | GEMAOFIL_01656 | | Beta-hexosaminidase | 0.11 | GEMAOFIL_01208 | | D-alanyl-D-alanine carboxypeptidase DacC | low | > 93 |
| Pseudomonas simiae WCS417 | 0.40 | PS417_07620 | | beta-hexosaminidase | 0.11 | PS417_05005 | | penicillin-binding protein | low | > 88 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.39 | Psyr_3281 | | Glycoside hydrolase, family 3, N-terminal | 0.08 | Psyr_2111 | | Peptidase S13, D-Ala-D-Ala carboxypeptidase C | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.39 | Psyr_3281 | | Glycoside hydrolase, family 3, N-terminal | 0.08 | Psyr_2111 | | Peptidase S13, D-Ala-D-Ala carboxypeptidase C | low | > 86 |
| Pseudomonas fluorescens SBW25-INTG | 0.39 | PFLU_RS07695 | | beta-N-acetylhexosaminidase | 0.11 | PFLU_RS05075 | | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.39 | PFLU_RS07695 | | beta-N-acetylhexosaminidase | 0.11 | PFLU_RS05075 | | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase | low | > 109 |
| Pseudomonas sp. BP01 | 0.39 | JOY50_RS25085 | nagZ | beta-N-acetylhexosaminidase | 0.07 | JOY50_RS22085 | dacB | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase | low | > 84 |
| Herbaspirillum seropedicae SmR1 | 0.38 | HSERO_RS09685 | | beta-hexosaminidase | 0.08 | HSERO_RS16870 | | D-alanyl-D-alanine carboxypeptidase | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.35 | H281DRAFT_04367 | | beta-N-acetylhexosaminidase | 0.07 | H281DRAFT_04181 | | D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4) | 0.44 | 16 |
| Acidovorax sp. GW101-3H11 | 0.33 | Ac3H11_1561 | | Beta N-acetyl-glucosaminidase (EC 3.2.1.52) | 0.07 | Ac3H11_670 | | D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) | low | > 79 |
| Variovorax sp. OAS795 | 0.32 | ABID97_RS08390 | | beta-N-acetylhexosaminidase | 0.07 | ABID97_RS01685 | | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase | low | > 91 |
| Dyella japonica UNC79MFTsu3.2 | 0.32 | ABZR86_RS07110 | | beta-N-acetylhexosaminidase | 0.10 | ABZR86_RS00485 | | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase | — | — |
| Variovorax sp. SCN45 | 0.30 | GFF3875 | | beta-N-acetylglucosaminidase (EC 3.2.1.52) | 0.07 | GFF5516 | | D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) | low | > 127 |
| Sphingomonas koreensis DSMZ 15582 | 0.19 | Ga0059261_3481 | | Beta-glucosidase-related glycosidases | 0.09 | Ga0059261_1299 | | D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family | low | > 68 |
| Sphingobium sp. HT1-2 | 0.17 | GFF1967 | | beta-N-acetylglucosaminidase (EC 3.2.1.52) | 0.08 | GFF4681 | | D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) | low | > 95 |
Not shown: 48 genomes with orthologs for CSW01_03620 only; 9 genomes with orthologs for CSW01_03320 only