Conservation of cofitness between CSW01_14550 and CSW01_02880 in Vibrio cholerae E7946 ATCC 55056

47 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_14550 type VI secretion system contractile sheath small subunit 1.0 CSW01_02880 regulatory protein RecX 0.56 1
Marinobacter adhaerens HP15 0.69 HP15_3476 uncharacterized conserved protein UCP028301 0.24 HP15_1237 regulatory protein RecX-like protein low > 73
Dickeya dadantii 3937 0.64 DDA3937_RS07015 type VI secretion system contractile sheath small subunit 0.24 DDA3937_RS16240 recombination regulator RecX low > 74
Dickeya dianthicola 67-19 0.63 HGI48_RS07945 type VI secretion system contractile sheath small subunit 0.25 HGI48_RS16350 recombination regulator RecX low > 71
Dickeya dianthicola ME23 0.63 DZA65_RS08540 type VI secretion system contractile sheath small subunit 0.25 DZA65_RS17445 recombination regulator RecX low > 75
Pectobacterium carotovorum WPP14 0.62 HER17_RS04840 type VI secretion system contractile sheath small subunit 0.26 HER17_RS05050 recombination regulator RecX low > 75
Pseudomonas sp. S08-1 0.56 OH686_12865 T6SS component TssB (ImpB/VipA) 0.33 OH686_18210 Regulatory protein RecX low > 80
Escherichia coli HS(pFamp)R (ATCC 700891) 0.55 OHPLBJKB_03426 hypothetical protein 0.28 OHPLBJKB_01036 Regulatory protein RecX low > 74
Escherichia coli ECOR27 0.55 NOLOHH_02210 tssB Type VI secretion system protein TssB 0.28 NOLOHH_12550 recX recombination regulator RecX low > 76
Escherichia coli ECRC62 0.55 BNILDI_00410 tssB Type VI secretion system protein TssB 0.28 BNILDI_11110 recX recombination regulator RecX low > 75
Pseudomonas sp. BP01 0.55 JOY50_RS02355 tssB type VI secretion system contractile sheath small subunit 0.30 JOY50_RS23785 recX recombination regulator RecX low > 84
Pseudomonas putida KT2440 0.54 PP_2624 conserved protein of unknown function 0.30 PP_1630 Regulatory protein RecX low > 96
Pseudomonas segetis P6 0.54 MPMX49_00131 hypothetical protein 0.28 MPMX49_03329 Regulatory protein RecX — —
Escherichia coli ECRC100 0.53 OKFHMN_09850 tssB Type VI secretion system protein TssB 0.28 OKFHMN_20710 recX recombination regulator RecX low > 79
Escherichia coli ECRC99 0.53 KEDOAH_18300 tssB Type VI secretion system protein TssB 0.28 KEDOAH_07425 recX recombination regulator RecX — —
Escherichia coli ECRC102 0.53 NIAGMN_07700 tssB Type VI secretion system protein TssB 0.28 NIAGMN_18480 recX recombination regulator RecX low > 80
Escherichia coli ECRC98 0.53 JDDGAC_13450 tssB Type VI secretion system protein TssB 0.28 JDDGAC_24375 recX recombination regulator RecX low > 87
Escherichia coli ECRC101 0.53 MCAODC_00370 tssB Type VI secretion system protein TssB 0.28 MCAODC_11235 recX recombination regulator RecX low > 88
Variovorax sp. OAS795 0.53 ABID97_RS12920 type VI secretion system contractile sheath small subunit 0.19 ABID97_RS02270 recombination regulator RecX — —
Pseudomonas stutzeri RCH2 0.53 Psest_0133 type VI secretion protein, VC_A0107 family 0.30 Psest_2871 Uncharacterized protein conserved in bacteria — —
Pseudomonas fluorescens FW300-N2E3 0.51 AO353_09450 type VI secretion protein 0.29 AO353_16810 recombinase RecX low > 101
Pseudomonas sp. DMC3 0.50 GFF460 hypothetical protein 0.29 GFF2112 Regulatory protein RecX low > 89
Pseudomonas aeruginosa PA14 0.50 IKLFDK_07975 hypothetical protein 0.27 IKLFDK_18460 recombination regulator RecX — —
Pseudomonas fluorescens FW300-N1B4 0.50 Pf1N1B4_2083 Uncharacterized protein ImpB 0.27 Pf1N1B4_3144 Regulatory protein RecX — —
Escherichia fergusonii Becca 0.49 EFB2_03810 hypothetical protein 0.28 EFB2_01226 Regulatory protein RecX low > 86
Pseudomonas fluorescens FW300-N2E2 0.49 Pf6N2E2_4298 Uncharacterized protein ImpB 0.29 Pf6N2E2_2992 Regulatory protein RecX low > 103
Pseudomonas fluorescens SBW25 0.47 PFLU_RS17295 type VI secretion system contractile sheath small subunit 0.28 PFLU_RS05890 recombination regulator RecX — —
Pseudomonas fluorescens SBW25-INTG 0.47 PFLU_RS17295 type VI secretion system contractile sheath small subunit 0.28 PFLU_RS05890 recombination regulator RecX low > 109
Pseudomonas fluorescens FW300-N2C3 0.47 AO356_12130 type VI secretion protein 0.31 AO356_05665 recombinase RecX — —
Pseudomonas simiae WCS417 0.46 PS417_15325 type VI secretion protein 0.28 PS417_05820 recombinase RecX low > 88
Enterobacter sp. TBS_079 0.33 MPMX20_01627 hypothetical protein 0.30 MPMX20_03579 Regulatory protein RecX low > 85
Pantoea sp. MT58 0.33 IAI47_17475 type VI secretion system contractile sheath small subunit 0.26 IAI47_04305 regulatory protein RecX low > 76
Erwinia amylovora T8 0.32 OLJFJH_03155 type VI secretion system contractile sheath small subunit 0.27 OLJFJH_09580 recombination regulator RecX low > 58
Enterobacter asburiae PDN3 0.32 EX28DRAFT_0242 type VI secretion protein, VC_A0107 family 0.30 EX28DRAFT_2784 Uncharacterized protein conserved in bacteria low > 76
Escherichia coli Nissle 1917 0.31 ECOLIN_RS15695 type VI secretion system contractile sheath small subunit 0.28 ECOLIN_RS15055 recombination regulator RecX — —
Klebsiella pneumoniae MKP103 0.30 KDGMDA_20350 type VI secretion system contractile sheath small subunit VipA 0.29 KDGMDA_02845 recombination regulator RecX — —
Herbaspirillum seropedicae SmR1 0.27 HSERO_RS03700 type VI secretion protein 0.20 HSERO_RS03275 regulatory protein RecX low > 78
Ralstonia solanacearum GMI1000 0.26 RS_RS20670 type VI secretion system contractile sheath small subunit 0.19 RS_RS02765 regulatory protein RecX low > 80
Ralstonia solanacearum UW163 0.26 UW163_RS19120 type VI secretion system contractile sheath small subunit 0.19 UW163_RS01620 recombination regulator RecX — —
Ralstonia solanacearum IBSBF1503 0.26 RALBFv3_RS20055 type VI secretion system contractile sheath small subunit 0.19 RALBFv3_RS12015 recombination regulator RecX low > 76
Pseudomonas syringae pv. syringae B728a ΔmexB 0.26 Psyr_4953 Uncharacterized conserved protein UCP028301 0.32 Psyr_1379 Regulatory protein RecX — —
Pseudomonas syringae pv. syringae B728a 0.26 Psyr_4953 Uncharacterized conserved protein UCP028301 0.32 Psyr_1379 Regulatory protein RecX low > 86
Ralstonia sp. UNC404CL21Col 0.26 ABZR87_RS20240 type VI secretion system contractile sheath small subunit 0.19 ABZR87_RS07970 recombination regulator RecX low > 80
Ralstonia solanacearum PSI07 0.25 RPSI07_RS02920 type VI secretion system contractile sheath small subunit 0.20 RPSI07_RS21255 recombination regulator RecX — —
Acinetobacter radioresistens SK82 0.25 MPMX26_00962 hypothetical protein 0.25 MPMX26_01307 Regulatory protein RecX low > 36
Serratia liquefaciens MT49 0.24 IAI46_05530 type VI secretion system contractile sheath small subunit 0.31 IAI46_03845 recombination regulator RecX low > 86
Variovorax sp. SCN45 0.23 GFF3011 T6SS component TssB (ImpB/VipA) 0.20 GFF5391 Regulatory protein RecX — —
Erwinia tracheiphila SCR3 0.19 LU632_RS00710 tssB type VI secretion system contractile sheath small subunit 0.26 LU632_RS15730 recombination regulator RecX low > 74

Not shown: 7 genomes with orthologs for CSW01_14550 only; 26 genomes with orthologs for CSW01_02880 only