Conservation of cofitness between CSW01_17900 and CSW01_02860 in Vibrio cholerae E7946 ATCC 55056

85 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_17900 glycerol kinase 1.0 CSW01_02860 sulfate ABC transporter permease subunit CysW 0.40 13
Enterobacter asburiae PDN3 0.81 EX28DRAFT_4399 glycerol kinase 0.61 EX28DRAFT_0207 sulfate ABC transporter, permease protein CysW low > 76
Enterobacter sp. TBS_079 0.81 MPMX20_04543 Glycerol kinase 0.61 MPMX20_03315 Sulfate transport system permease protein CysW low > 85
Escherichia coli BL21 0.80 ECD_03811 glycerol kinase 0.61 ECD_02323 sulfate/thiosulfate ABC transporter permease low > 61
Escherichia coli ECOR27 0.80 NOLOHH_05910 glpK glycerol kinase GlpK 0.61 NOLOHH_13840 cysW sulfate/thiosulfate ABC transporter permease CysW low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.80 OHPLBJKB_04125 Glycerol kinase 0.62 OHPLBJKB_01300 Sulfate transport system permease protein CysW low > 74
Escherichia coli ECRC101 0.80 MCAODC_04275 glpK glycerol kinase GlpK 0.61 MCAODC_12690 cysW sulfate/thiosulfate ABC transporter permease CysW low > 87
Escherichia fergusonii Becca 0.80 EFB2_04692 Glycerol kinase 0.62 EFB2_01454 Sulfate transport system permease protein CysW low > 86
Escherichia coli ECRC62 0.80 BNILDI_05620 glpK glycerol kinase GlpK 0.62 BNILDI_12705 cysW sulfate/thiosulfate ABC transporter permease CysW low > 75
Escherichia coli ECRC99 0.80 KEDOAH_14385 glpK glycerol kinase GlpK 0.61 KEDOAH_06060 cysW sulfate/thiosulfate ABC transporter permease CysW — —
Escherichia coli ECRC102 0.80 NIAGMN_11530 glpK glycerol kinase GlpK 0.61 NIAGMN_19930 cysW sulfate/thiosulfate ABC transporter permease CysW low > 80
Escherichia coli ECRC98 0.80 JDDGAC_17400 glpK glycerol kinase GlpK 0.61 JDDGAC_26110 cysW sulfate/thiosulfate ABC transporter permease CysW low > 87
Escherichia coli BW25113 0.80 b3926 glpK glycerol kinase (NCBI) 0.62 b2423 cysW sulfate/thiosulfate transporter subunit (NCBI) 0.23 28
Escherichia coli ECRC100 0.80 OKFHMN_13775 glpK glycerol kinase GlpK 0.61 OKFHMN_22160 cysW sulfate/thiosulfate ABC transporter permease CysW low > 79
Escherichia coli Nissle 1917 0.80 ECOLIN_RS22610 glycerol kinase GlpK 0.62 ECOLIN_RS13910 sulfate/thiosulfate ABC transporter permease CysW low > 55
Escherichia coli ECOR38 0.80 HEPCGN_12420 glpK glycerol kinase GlpK 0.62 HEPCGN_21335 cysW sulfate/thiosulfate ABC transporter permease CysW low > 88
Klebsiella michiganensis M5al 0.80 BWI76_RS27515 glycerol kinase 0.61 BWI76_RS20695 sulfate/thiosulfate transporter permease subunit low > 92
Klebsiella pneumoniae MKP103 0.80 KDGMDA_08190 glycerol kinase GlpK 0.60 KDGMDA_27535 sulfate/thiosulfate ABC transporter permease CysW low > 95
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.80 GFF2307 Glycerol kinase (EC 2.7.1.30) 0.61 GFF2057 Sulfate transport system permease protein CysW low > 78
Rahnella sp. WP5 0.80 EX31_RS14270 glycerol kinase GlpK 0.62 EX31_RS20215 sulfate/thiosulfate ABC transporter permease CysW low > 89
Serratia liquefaciens MT49 0.79 IAI46_24600 glycerol kinase GlpK 0.59 IAI46_18500 sulfate/thiosulfate ABC transporter permease CysW low > 87
Dickeya dianthicola ME23 0.79 DZA65_RS21530 glycerol kinase GlpK 0.45 DZA65_RS17065 sulfate ABC transporter permease subunit CysW low > 75
Dickeya dianthicola 67-19 0.79 HGI48_RS20485 glycerol kinase GlpK 0.46 HGI48_RS15980 sulfate ABC transporter permease subunit CysW low > 71
Dickeya dadantii 3937 0.79 DDA3937_RS00890 glycerol kinase GlpK 0.46 DDA3937_RS15840 sulfate ABC transporter permease subunit CysW low > 74
Pectobacterium carotovorum WPP14 0.78 HER17_RS00825 glycerol kinase GlpK 0.61 HER17_RS17215 sulfate/thiosulfate ABC transporter permease CysW low > 75
Pantoea sp. MT58 0.77 IAI47_00825 glycerol kinase GlpK 0.58 IAI47_05395 sulfate/thiosulfate ABC transporter permease CysW low > 76
Pantoea agglomerans CFBP13505 P0401 0.77 PagCFBP13505_RS18515 glycerol kinase GlpK 0.60 PagCFBP13505_RS19940 sulfate/thiosulfate ABC transporter permease CysW low > 74
Erwinia tracheiphila SCR3 0.76 LU632_RS19705 glpK glycerol kinase GlpK 0.58 LU632_RS06685 cysW sulfate/thiosulfate ABC transporter permease CysW low > 73
Erwinia tracheiphila HP pepo 2.2 0.76 IJEDHG_12960 glpK glycerol kinase GlpK 0.58 IJEDHG_16810 cysW sulfate/thiosulfate ABC transporter permease CysW low > 61
Erwinia amylovora T8 0.76 OLJFJH_06040 glycerol kinase GlpK 0.57 OLJFJH_10825 sulfate/thiosulfate ABC transporter permease CysW 0.71 35
Pseudomonas aeruginosa PUPa3 0.74 DQ20_RS42060 glpK;go_function=glycerol glycerol kinase GlpK 0.51 DQ20_RS37940 cysW;go_component=plasma sulfate ABC transporter permease subunit CysW low > 101
Pseudomonas aeruginosa MRSN321 0.74 DY961_RS15080 glpK;go_function=glycerol glycerol kinase GlpK 0.51 DY961_RS21350 cysW;go_component=plasma sulfate ABC transporter permease subunit CysW low > 100
Pseudomonas aeruginosa PA14 0.74 IKLFDK_18290 glycerol kinase GlpK 0.51 IKLFDK_24055 sulfate ABC transporter permease subunit CysW low > 98
Pseudomonas sp. SVBP6 0.73 COO64_RS16800 glpK glycerol kinase GlpK 0.51 COO64_RS12520 cysW sulfate ABC transporter permease subunit CysW low > 93
Pseudomonas sp. DMC3 0.72 GFF5107 Glycerol kinase 0.49 GFF4247 Sulfate transport system permease protein CysW low > 89
Pseudomonas sp. BP01 0.72 JOY50_RS14870 glpK glycerol kinase GlpK 0.51 JOY50_RS20510 cysW sulfate ABC transporter permease subunit CysW low > 84
Pseudomonas fluorescens GW456-L13 0.72 PfGW456L13_1734 Glycerol kinase (EC 2.7.1.30) 0.48 PfGW456L13_484 Sulfate transport system permease protein CysW low > 87
Pseudomonas putida KT2440 0.72 PP_1075 glycerol kinase 0.51 PP_5169 sulfate ABC transporter, inner membrane subunit CysW low > 96
Pseudomonas fluorescens FW300-N1B4 0.72 Pf1N1B4_767 Glycerol kinase (EC 2.7.1.30) 0.48 Pf1N1B4_1725 Sulfate transport system permease protein CysW low > 87
Pseudomonas simiae WCS417 0.72 PS417_05575 Glycerol kinase (EC 2.7.1.30) (from data) 0.49 PS417_00940 sulfate ABC transporter permease low > 88
Pseudomonas lactucae CFBP13502 0.72 GEMAOFIL_01302 Glycerol kinase 0.49 GEMAOFIL_00411 Sulfate transport system permease protein CysW low > 96
Pseudomonas fluorescens SBW25 0.72 PFLU_RS05660 glycerol kinase GlpK 0.49 PFLU_RS00955 sulfate ABC transporter permease subunit CysW low > 109
Pseudomonas fluorescens SBW25-INTG 0.72 PFLU_RS05660 glycerol kinase GlpK 0.49 PFLU_RS00955 sulfate ABC transporter permease subunit CysW low > 109
Pseudomonas fluorescens FW300-N2E3 0.72 AO353_04180 glycerol kinase 0.48 AO353_11550 sulfate ABC transporter permease low > 101
Pseudomonas sp. RS175 0.72 PFR28_03368 Glycerol kinase 0.49 PFR28_04764 Sulfate transport system permease protein CysW low > 88
Pseudomonas orientalis W4I3 0.72 QF045_RS08500 glycerol kinase GlpK 0.49 QF045_RS04010 sulfate ABC transporter permease subunit CysW low > 93
Pseudomonas fluorescens FW300-N2C3 0.72 AO356_18250 glycerol kinase 0.49 AO356_10675 sulfate ABC transporter permease low > 104
Pseudomonas fluorescens FW300-N2E2 0.72 Pf6N2E2_5574 Glycerol kinase (EC 2.7.1.30) 0.49 Pf6N2E2_4003 Sulfate transport system permease protein CysW low > 103
Pseudomonas syringae pv. syringae B728a ΔmexB 0.71 Psyr_3905 glycerol kinase 0.51 Psyr_0082 Binding-protein-dependent transport systems inner membrane component low > 86
Pseudomonas syringae pv. syringae B728a 0.71 Psyr_3905 glycerol kinase 0.51 Psyr_0082 Binding-protein-dependent transport systems inner membrane component low > 86
Shewanella sp. ANA-3 0.71 Shewana3_3756 glycerol kinase (RefSeq) 0.72 Shewana3_3191 sulfate ABC transporter, inner membrane subunit CysW (RefSeq) low > 73
Shewanella oneidensis MR-1 0.71 SO4230 glpK glycerol kinase (NCBI ptt file) 0.70 SO3601 cysW-1 sulfate ABC transporter, permease protein (NCBI ptt file) low > 76
Pseudomonas stutzeri RCH2 0.70 Psest_2773 glycerol kinase 0.50 Psest_4062 sulfate ABC transporter, permease protein CysW low > 67
Acinetobacter baumannii LAC-4 0.69 RR41_RS04245 glycerol kinase GlpK 0.54 RR41_RS04780 sulfate ABC transporter permease subunit CysW low > 55
Xanthomonas campestris pv. campestris strain 8004 0.60 Xcc-8004.469.1 Glycerol kinase (EC 2.7.1.30) 0.45 Xcc-8004.4085.1 Sulfate transport system permease protein CysW low > 74
Dyella japonica UNC79MFTsu3.2 0.60 ABZR86_RS20035 glycerol kinase GlpK 0.46 ABZR86_RS02890 sulfate ABC transporter permease subunit CysW low > 74
Paraburkholderia sabiae LMG 24235 0.59 QEN71_RS02230 glycerol kinase GlpK 0.52 QEN71_RS22580 sulfate ABC transporter permease subunit CysW low > 153
Rhodanobacter sp000427505 FW510-R12 0.56 LRK53_RS17825 glycerol kinase GlpK 0.48 LRK53_RS12170 sulfate ABC transporter permease subunit CysW low > 59
Cupriavidus basilensis FW507-4G11 0.55 RR42_RS13810 glycerol kinase 0.57 RR42_RS12255 sulfate/thiosulfate transporter permease subunit low > 128
Variovorax sp. SCN45 0.55 GFF2679 Glycerol kinase (EC 2.7.1.30) 0.60 GFF1289 Sulfate transport system permease protein CysW low > 127
Herbaspirillum seropedicae SmR1 0.55 HSERO_RS04875 glycerol kinase 0.55 HSERO_RS08235 sulfate ABC transporter permease low > 78
Hydrogenophaga sp. GW460-11-11-14-LB1 0.54 GFF2807 Glycerol kinase (EC 2.7.1.30) 0.55 GFF5098 Sulfate transport system permease protein CysW low > 90
Ralstonia solanacearum IBSBF1503 0.54 RALBFv3_RS07395 glycerol kinase 0.54 RALBFv3_RS00090 sulfate ABC transporter permease subunit CysW low > 76
Ralstonia solanacearum UW163 0.54 UW163_RS06225 glycerol kinase 0.54 UW163_RS13420 sulfate ABC transporter permease subunit CysW — —
Rhodanobacter sp. FW510-T8 0.54 OKGIIK_00030 glpK glycerol kinase GlpK 0.48 OKGIIK_10925 cysW sulfate ABC transporter permease subunit CysW low > 53
Variovorax sp. OAS795 0.53 ABID97_RS19965 glycerol kinase GlpK 0.60 ABID97_RS15580 sulfate ABC transporter permease subunit CysW low > 91
Ralstonia solanacearum PSI07 0.53 RPSI07_RS09850 glycerol kinase 0.54 RPSI07_RS17395 sulfate ABC transporter permease subunit CysW low > 81
Ralstonia solanacearum GMI1000 0.53 RS_RS15335 glycerol kinase 0.52 RS_RS06750 sulfate ABC transporter permease subunit CysW low > 80
Ralstonia sp. UNC404CL21Col 0.53 ABZR87_RS03055 glycerol kinase GlpK 0.55 ABZR87_RS11545 sulfate ABC transporter permease subunit CysW low > 80
Acidovorax sp. GW101-3H11 0.53 Ac3H11_789 Glycerol kinase (EC 2.7.1.30) 0.52 Ac3H11_910 Sulfate transport system permease protein CysW low > 79
Castellaniella sp019104865 MT123 0.52 ABCV34_RS05865 glycerol kinase GlpK 0.50 ABCV34_RS03945 sulfate ABC transporter permease subunit CysW low > 48
Marinobacter adhaerens HP15 0.52 HP15_748 glycerol kinase 0.70 HP15_1346 sulfate ABC transporter, inner membrane subunit CysW low > 73
Pseudomonas sp. S08-1 0.51 OH686_20375 glycerol kinase 0.50 OH686_11680 sulfate ABC transporter, permease protein CysW low > 80
Rhizobium sp. OAE497 0.51 ABIE40_RS13710 glycerol kinase GlpK 0.48 ABIE40_RS24580 sulfate ABC transporter permease subunit CysW low > 107
Pseudomonas segetis P6 0.51 MPMX49_01432 Glycerol kinase 0.48 MPMX49_01152 Sulfate transport system permease protein CysW low > 75
Acinetobacter radioresistens SK82 0.49 MPMX26_02393 Glycerol kinase 0.57 MPMX26_02169 Sulfate transport system permease protein CysW low > 36
Mycobacterium tuberculosis H37Rv 0.49 Rv3696c Probable glycerol kinase GlpK (ATP:glycerol 3-phosphotransferase) (glycerokinase) (GK) 0.35 Rv2398c Probable sulfate-transport integral membrane protein ABC transporter CysW — —
Agrobacterium fabrum C58 0.49 Atu3890 glycerol kinase 0.58 Atu3502 ABC transporter permease low > 89
Azospirillum brasilense Sp245 0.48 AZOBR_RS25905 glycerol kinase 0.55 AZOBR_RS19275 sulfate/thiosulfate transporter permease subunit low > 97
Azospirillum sp. SherDot2 0.48 MPMX19_05974 Glycerol kinase 0.53 MPMX19_04168 Sulfate transport system permease protein CysW low > 112
Bosea sp. OAE506 0.47 ABIE41_RS15215 glycerol kinase GlpK 0.50 ABIE41_RS15350 sulfate ABC transporter permease subunit CysW low > 77
Rhodopseudomonas palustris CGA009 0.46 TX73_019190 glycerol kinase GlpK 0.46 TX73_003865 sulfate ABC transporter permease subunit CysW low > 86
Xanthobacter sp. DMC5 0.45 GFF4168 Glycerol kinase 0.48 GFF2440 Sulfate transport system permease protein CysW — —
Synechocystis sp000284455 PCC 6803 0.42 SGL_RS11095 glycerol kinase GlpK 0.45 SGL_RS17155 sulfate ABC transporter permease subunit CysW low > 52
Caulobacter crescentus NA1000 Δfur 0.42 CCNA_01281 glycerol kinase 0.49 CCNA_01669 sulfate transport system permease protein cysW low > 67
Caulobacter crescentus NA1000 0.42 CCNA_01281 glycerol kinase 0.49 CCNA_01669 sulfate transport system permease protein cysW low > 66

Not shown: 29 genomes with orthologs for CSW01_17900 only; 5 genomes with orthologs for CSW01_02860 only