Conservation of cofitness between CSW01_18185 and CSW01_02205 in Vibrio cholerae E7946 ATCC 55056

67 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_18185 DEAD/DEAH box family ATP-dependent RNA helicase 1.0 CSW01_02205 ribonuclease E/G 0.51 6
Pectobacterium carotovorum WPP14 0.37 HER17_RS18175 DEAD/DEAH family ATP-dependent RNA helicase 0.79 HER17_RS20150 ribonuclease G low > 75
Dechlorosoma suillum PS 0.37 Dsui_1351 DNA/RNA helicase, superfamily II 0.57 Dsui_0434 ribonuclease, Rne/Rng family low > 51
Rahnella sp. WP5 0.37 EX31_RS08510 DEAD/DEAH family ATP-dependent RNA helicase 0.79 EX31_RS12255 ribonuclease G low > 89
Dyella japonica UNC79MFTsu3.2 0.37 ABZR86_RS08990 DEAD/DEAH box helicase 0.51 ABZR86_RS21730 ribonuclease G 0.47 46
Erwinia tracheiphila SCR3 0.37 LU632_RS21030 DEAD/DEAH family ATP-dependent RNA helicase 0.79 LU632_RS21430 rng ribonuclease G — —
Shewanella loihica PV-4 0.37 Shew_0531 DEAD/DEAH box helicase domain-containing protein (RefSeq) 0.72 Shew_0407 ribonuclease G (RefSeq) low > 60
Shewanella amazonensis SB2B 0.37 Sama_0512 ATP-dependent RNA helicase DeaD (RefSeq) 0.72 Sama_0471 ribonuclease G (RefSeq) low > 62
Erwinia tracheiphila HP pepo 2.2 0.37 IJEDHG_13975 DEAD/DEAH family ATP-dependent RNA helicase 0.79 IJEDHG_13580 rng ribonuclease G — —
Rhodanobacter sp. FW510-T8 0.36 OKGIIK_09705 ATP-dependent RNA helicase 0.52 OKGIIK_10290 rng ribonuclease G low > 53
Dickeya dadantii 3937 0.36 DDA3937_RS03100 DEAD/DEAH family ATP-dependent RNA helicase 0.80 DDA3937_RS01450 ribonuclease G 0.45 30
Pantoea sp. MT58 0.36 IAI47_16990 DEAD/DEAH family ATP-dependent RNA helicase 0.78 IAI47_02455 ribonuclease G low > 76
Serratia liquefaciens MT49 0.36 IAI46_01970 DEAD/DEAH family ATP-dependent RNA helicase 0.80 IAI46_22700 ribonuclease G low > 87
Pantoea agglomerans CFBP13505 P0401 0.36 PagCFBP13505_RS09085 DEAD/DEAH family ATP-dependent RNA helicase 0.78 PagCFBP13505_RS11050 ribonuclease G low > 74
Erwinia amylovora T8 0.36 OLJFJH_07275 DEAD/DEAH family ATP-dependent RNA helicase 0.79 OLJFJH_06930 ribonuclease G low > 58
Xanthomonas campestris pv. campestris strain 8004 0.36 Xcc-8004.1841.1 DEAD-box ATP-dependent RNA helicase CshA (EC 3.6.4.13) 0.55 Xcc-8004.1880.1 Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) low > 74
Rhodanobacter denitrificans FW104-10B01 0.36 LRK54_RS02650 DEAD/DEAH box helicase 0.50 LRK54_RS03405 ribonuclease G low > 59
Dickeya dianthicola ME23 0.36 DZA65_RS03270 DEAD/DEAH family ATP-dependent RNA helicase 0.80 DZA65_RS01430 ribonuclease G — —
Rhodanobacter denitrificans MT42 0.36 LRK55_RS02405 DEAD/DEAH box helicase 0.50 LRK55_RS03155 ribonuclease G low > 63
Dickeya dianthicola 67-19 0.36 HGI48_RS03275 DEAD/DEAH family ATP-dependent RNA helicase 0.80 HGI48_RS01370 ribonuclease G low > 71
Klebsiella michiganensis M5al 0.36 BWI76_RS25055 DEAD/DEAH family ATP-dependent RNA helicase 0.81 BWI76_RS25480 ribonuclease E/G — —
Alteromonas macleodii MIT1002 0.35 MIT1002_00666 Cold-shock DEAD box protein A 0.74 MIT1002_00224 Ribonuclease G low > 70
Shewanella oneidensis MR-1 0.35 SO4034 deaD ATP-dependent RNA helicase DeaD (NCBI ptt file) 0.74 SO4094 cafA ribonuclease G (NCBI ptt file) 0.52 10
Klebsiella pneumoniae MKP103 0.35 KDGMDA_05860 DEAD/DEAH family ATP-dependent RNA helicase 0.81 KDGMDA_06255 ribonuclease G low > 95
Shewanella sp. ANA-3 0.35 Shewana3_3595 DEAD/DEAH box helicase domain-containing protein (RefSeq) 0.74 Shewana3_3644 ribonuclease G (RefSeq) low > 73
Enterobacter asburiae PDN3 0.35 EX28DRAFT_3211 Superfamily II DNA and RNA helicases 0.80 EX28DRAFT_3297 ribonuclease, Rne/Rng family — —
Rhodanobacter sp000427505 FW510-R12 0.35 LRK53_RS07300 DEAD/DEAH box helicase 0.52 LRK53_RS06540 ribonuclease G low > 59
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.35 GFF1504 DEAD-box ATP-dependent RNA helicase CshA (EC 3.6.4.13) 0.80 GFF2138 Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) low > 78
Enterobacter sp. TBS_079 0.35 MPMX20_04066 ATP-dependent RNA helicase DeaD 0.80 MPMX20_04153 Ribonuclease G low > 85
Escherichia coli ECOR38 0.35 HEPCGN_17030 deaD ATP-dependent RNA helicase DeaD 0.80 HEPCGN_16610 rng ribonuclease G low > 88
Escherichia coli ECRC99 0.35 KEDOAH_09995 deaD ATP-dependent RNA helicase DeaD 0.80 KEDOAH_10405 rng ribonuclease G — —
Escherichia coli ECRC101 0.35 MCAODC_08675 deaD ATP-dependent RNA helicase DeaD 0.80 MCAODC_08265 rng ribonuclease G 0.44 32
Escherichia coli ECRC100 0.35 OKFHMN_18155 deaD ATP-dependent RNA helicase DeaD 0.80 OKFHMN_17745 rng ribonuclease G low > 79
Escherichia coli ECRC102 0.35 NIAGMN_15915 deaD ATP-dependent RNA helicase DeaD 0.80 NIAGMN_15505 rng ribonuclease G 0.51 39
Escherichia coli ECRC62 0.35 BNILDI_01580 deaD ATP-dependent RNA helicase DeaD 0.80 BNILDI_01990 rng ribonuclease G low > 75
Escherichia fergusonii Becca 0.35 EFB2_00661 ATP-dependent RNA helicase DeaD 0.80 EFB2_00584 Ribonuclease G 0.39 8
Escherichia coli BL21 0.35 ECD_03029 ATP-dependent RNA helicase 0.80 ECD_03106 ribonuclease G low > 61
Escherichia coli ECRC98 0.35 JDDGAC_21780 deaD ATP-dependent RNA helicase DeaD 0.80 JDDGAC_21370 rng ribonuclease G low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.35 OHPLBJKB_00538 ATP-dependent RNA helicase DeaD 0.80 OHPLBJKB_00458 Ribonuclease G low > 74
Escherichia coli BW25113 0.35 b3162 deaD inducible ATP-independent RNA helicase (VIMSS) 0.80 b3247 cafA bundles of cytoplasmic filaments (VIMSS) low > 76
Escherichia coli Nissle 1917 0.35 ECOLIN_RS18165 ATP-dependent RNA helicase DeaD 0.80 ECOLIN_RS18605 ribonuclease G low > 55
Kangiella aquimarina DSM 16071 0.34 B158DRAFT_1850 ATP-dependent RNA helicase CsdA (EC 5.99.1.-) 0.57 B158DRAFT_2069 ribonuclease, Rne/Rng family low > 40
Escherichia coli ECOR27 0.34 NOLOHH_09955 deaD ATP-dependent RNA helicase DeaD 0.80 NOLOHH_09530 rng ribonuclease G low > 76
Pseudomonas sp. S08-1 0.33 OH686_22545 DEAD-box ATP-dependent RNA helicase DeaD ( CshA) 0.56 OH686_08595 Ribonuclease G low > 80
Pseudomonas segetis P6 0.33 MPMX49_02165 ATP-dependent RNA helicase DeaD 0.55 MPMX49_03868 Ribonuclease G low > 75
Pseudomonas sp. BP01 0.32 JOY50_RS17005 DEAD/DEAH box helicase 0.56 JOY50_RS11055 rng ribonuclease G low > 84
Pseudomonas putida KT2440 0.32 PP_1868 ATP-dependent DEAD-box RNA helicase DeaD 0.57 PP_0937 endoribonuclease G (RNAse G) — —
Pseudomonas stutzeri RCH2 0.32 Psest_1804 Superfamily II DNA and RNA helicases 0.56 Psest_3323 ribonuclease, Rne/Rng family low > 67
Pseudomonas syringae pv. syringae B728a ΔmexB 0.31 Psyr_3619 Helicase, C-terminal:DbpA, RNA-binding:DEAD/DEAH box helicase, N-terminal 0.56 Psyr_4159 RNAse G — —
Pseudomonas simiae WCS417 0.31 PS417_08540 RNA helicase 0.57 PS417_04270 ribonuclease G low > 88
Pseudomonas fluorescens FW300-N2C3 0.31 AO356_03110 RNA helicase 0.57 AO356_07110 ribonuclease G — —
Pseudomonas syringae pv. syringae B728a 0.31 Psyr_3619 Helicase, C-terminal:DbpA, RNA-binding:DEAD/DEAH box helicase, N-terminal 0.56 Psyr_4159 RNAse G — —
Pseudomonas fluorescens FW300-N2E2 0.31 Pf6N2E2_2450 DEAD-box ATP-dependent RNA helicase CshA (EC 3.6.4.13) 0.57 Pf6N2E2_3283 Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) — —
Pseudomonas sp. DMC3 0.31 GFF4601 ATP-dependent RNA helicase DeaD 0.57 GFF1813 Ribonuclease G — —
Pseudomonas sp. RS175 0.31 PFR28_00980 ATP-dependent RNA helicase DeaD 0.57 PFR28_00158 Ribonuclease G low > 88
Pseudomonas fluorescens GW456-L13 0.31 PfGW456L13_2247 DEAD-box ATP-dependent RNA helicase CshA (EC 3.6.4.13) 0.57 PfGW456L13_5029 Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) — —
Pseudomonas lactucae CFBP13502 0.31 GEMAOFIL_01840 ATP-dependent RNA helicase DeaD 0.57 GEMAOFIL_01059 Ribonuclease G — —
Pseudomonas fluorescens SBW25 0.31 PFLU_RS08490 DEAD/DEAH box helicase 0.57 PFLU_RS04325 ribonuclease G — —
Pseudomonas fluorescens SBW25-INTG 0.31 PFLU_RS08490 DEAD/DEAH box helicase 0.57 PFLU_RS04325 ribonuclease G low > 109
Pseudomonas orientalis W4I3 0.31 QF045_RS11260 DEAD/DEAH box helicase 0.57 QF045_RS07260 ribonuclease G low > 93
Pseudomonas fluorescens FW300-N1B4 0.31 Pf1N1B4_265 DEAD-box ATP-dependent RNA helicase CshA (EC 3.6.4.13) 0.57 Pf1N1B4_1095 Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) — —
Pseudomonas fluorescens FW300-N2E3 0.31 AO353_19130 RNA helicase 0.56 AO353_05230 ribonuclease G — —
Pseudomonas aeruginosa MRSN321 0.30 DY961_RS02795 DEAD/DEAH box helicase 0.57 DY961_RS24090 rng;go_function=RNA ribonuclease G low > 100
Pseudomonas aeruginosa PUPa3 0.30 DQ20_RS32800 DEAD/DEAH box helicase 0.57 DQ20_RS56550 rng;go_function=RNA ribonuclease G low > 101
Pseudomonas aeruginosa PA14 0.30 IKLFDK_14425 ATP-dependent RNA helicase 0.57 IKLFDK_01695 ribonuclease G low > 98
Pontibacter actiniarum KMM 6156, DSM 19842 0.26 CA264_05910 RNA helicase 0.28 CA264_14980 ribonuclease E/G — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.25 ABZR88_RS01495 DEAD/DEAH box helicase 0.29 ABZR88_RS20445 Rne/Rng family ribonuclease — —
Parabacteroides merdae CL09T00C40 0.25 HMPREF1078_RS06015 DEAD/DEAH box helicase 0.28 HMPREF1078_RS14165 Rne/Rng family ribonuclease low > 61

Not shown: 7 genomes with orthologs for CSW01_18185 only; 26 genomes with orthologs for CSW01_02205 only