Conservation of cofitness between CSW01_01810 and CSW01_02060 in Vibrio cholerae E7946 ATCC 55056

68 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_01810 tRNA epoxyqueuosine(34) reductase QueG 1.0 CSW01_02060 methionine synthase 0.75 16
Pantoea agglomerans CFBP13505 P0401 0.70 PagCFBP13505_RS11155 tRNA epoxyqueuosine(34) reductase QueG 0.76 PagCFBP13505_RS22305 methionine synthase low > 74
Pantoea sp. MT58 0.70 IAI47_02560 tRNA epoxyqueuosine(34) reductase QueG 0.75 IAI47_17990 methionine synthase low > 76
Dickeya dadantii 3937 0.69 DDA3937_RS18645 tRNA epoxyqueuosine(34) reductase QueG 0.76 DDA3937_RS19040 methionine synthase low > 74
Pectobacterium carotovorum WPP14 0.68 HER17_RS02555 tRNA epoxyqueuosine(34) reductase QueG 0.76 HER17_RS02310 methionine synthase low > 75
Dickeya dianthicola 67-19 0.68 HGI48_RS18575 tRNA epoxyqueuosine(34) reductase QueG 0.75 HGI48_RS19130 methionine synthase low > 71
Dickeya dianthicola ME23 0.68 DZA65_RS19710 tRNA epoxyqueuosine(34) reductase QueG 0.75 DZA65_RS20250 methionine synthase low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.67 GFF819 Epoxyqueuosine (oQ) reductase QueG 0.76 GFF1358 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) low > 78
Escherichia coli BL21 0.67 ECD_04033 epoxyqueuosine reductase, cobalamine-stimulated; queosine biosynthesis 0.76 ECD_03891 homocysteine-N5-methyltetrahydrofolate transmethylase, B12-dependent low > 61
Escherichia coli ECOR27 0.67 NOLOHH_04550 queG tRNA epoxyqueuosine(34) reductase QueG 0.76 NOLOHH_05380 metH methionine synthase low > 76
Escherichia coli BW25113 0.67 b4166 yjeS predicted Fe-S electron transport protein (NCBI) 0.76 b4019 metH B12-dependent methionine synthase (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.67 OHPLBJKB_03876 Epoxyqueuosine reductase 0.76 OHPLBJKB_04030 Methionine synthase low > 74
Escherichia coli ECRC62 0.67 BNILDI_06940 queG tRNA epoxyqueuosine(34) reductase QueG 0.76 BNILDI_06140 metH methionine synthase low > 75
Escherichia coli ECRC102 0.67 NIAGMN_10135 queG tRNA epoxyqueuosine(34) reductase QueG 0.76 NIAGMN_10990 metH methionine synthase low > 80
Escherichia coli ECRC98 0.67 JDDGAC_15925 queG tRNA epoxyqueuosine(34) reductase QueG 0.75 JDDGAC_16865 metH methionine synthase low > 87
Escherichia coli ECRC99 0.67 KEDOAH_15870 queG tRNA epoxyqueuosine(34) reductase QueG 0.76 KEDOAH_14920 metH methionine synthase — —
Escherichia coli ECRC100 0.67 OKFHMN_12285 queG tRNA epoxyqueuosine(34) reductase QueG 0.76 OKFHMN_13240 metH methionine synthase low > 79
Escherichia coli ECOR38 0.67 HEPCGN_10515 queG tRNA epoxyqueuosine(34) reductase QueG 0.76 HEPCGN_11885 metH methionine synthase low > 88
Serratia liquefaciens MT49 0.67 IAI46_01595 tRNA epoxyqueuosine(34) reductase QueG 0.75 IAI46_23155 methionine synthase low > 86
Escherichia coli Nissle 1917 0.67 ECOLIN_RS24200 tRNA epoxyqueuosine(34) reductase QueG 0.75 ECOLIN_RS23160 methionine synthase low > 55
Escherichia coli ECRC101 0.67 MCAODC_02800 queG tRNA epoxyqueuosine(34) reductase QueG 0.76 MCAODC_03740 metH methionine synthase low > 88
Escherichia fergusonii Becca 0.67 EFB2_04369 Epoxyqueuosine reductase 0.75 EFB2_04592 Methionine synthase low > 86
Klebsiella pneumoniae MKP103 0.66 KDGMDA_11005 tRNA epoxyqueuosine(34) reductase QueG 0.76 KDGMDA_10165 methionine synthase low > 95
Rahnella sp. WP5 0.66 EX31_RS08850 tRNA epoxyqueuosine(34) reductase QueG 0.75 EX31_RS11760 methionine synthase low > 89
Enterobacter asburiae PDN3 0.66 EX28DRAFT_3363 epoxyqueuosine reductase 0.76 EX28DRAFT_4326 methionine synthase (B12-dependent) (EC 2.1.1.13) low > 76
Klebsiella michiganensis M5al 0.66 BWI76_RS02505 tRNA epoxyqueuosine(34) reductase QueG 0.76 BWI76_RS01685 methionine synthase low > 92
Enterobacter sp. TBS_079 0.65 MPMX20_00447 Epoxyqueuosine reductase 0.75 MPMX20_00235 Methionine synthase low > 85
Shewanella sp. ANA-3 0.64 Shewana3_0745 putative iron-sulfur cluster binding protein (RefSeq) 0.66 Shewana3_3282 metH B12-dependent methionine synthase (RefSeq) low > 73
Shewanella loihica PV-4 0.64 Shew_2979 putative iron-sulfur cluster binding protein (RefSeq) 0.65 Shew_0710 metH B12-dependent methionine synthase (RefSeq) low > 60
Shewanella oneidensis MR-1 0.63 SO3861 iron-sulfur cluster-binding protein (NCBI ptt file) 0.66 SO1030 metH 5-methyltetrahydrofolate--homocysteine methyltransferase (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.61 Sama_2625 iron-sulfur cluster-binding protein (RefSeq) 0.67 Sama_0758 metH B12-dependent methionine synthase (RefSeq) low > 62
Pseudomonas stutzeri RCH2 0.57 Psest_0677 iron-sulfur cluster binding protein, putative 0.66 Psest_2102 5-methyltetrahydrofolate--homocysteine methyltransferase low > 67
Pseudomonas syringae pv. syringae B728a ΔmexB 0.56 Psyr_0566 4Fe-4S cluster binding protein 0.64 Psyr_2464 methionine synthase (B12-dependent) low > 86
Pseudomonas syringae pv. syringae B728a 0.56 Psyr_0566 4Fe-4S cluster binding protein 0.64 Psyr_2464 methionine synthase (B12-dependent) low > 86
Pseudomonas aeruginosa PA14 0.55 IKLFDK_28790 tRNA epoxyqueuosine(34) reductase QueG 0.66 IKLFDK_08975 methionine synthase low > 100
Pseudomonas sp. S08-1 0.55 OH686_09500 epoxyqueuosine reductase 0.65 OH686_03335 methionine synthase low > 80
Pseudomonas segetis P6 0.55 MPMX49_04159 Epoxyqueuosine reductase 0.65 MPMX49_02589 Methionine synthase low > 75
Pseudomonas sp. DMC3 0.55 GFF3214 Epoxyqueuosine reductase 0.65 GFF3687 Methionine synthase low > 89
Pseudomonas fluorescens SBW25-INTG 0.55 PFLU_RS02540 tRNA epoxyqueuosine(34) reductase QueG 0.65 PFLU_RS13000 methionine synthase low > 109
Pseudomonas fluorescens SBW25 0.55 PFLU_RS02540 tRNA epoxyqueuosine(34) reductase QueG 0.65 PFLU_RS13000 methionine synthase low > 109
Pseudomonas simiae WCS417 0.54 PS417_02460 epoxyqueuosine reductase 0.64 PS417_12310 methionine synthase low > 88
Pseudomonas fluorescens FW300-N2E2 0.54 Pf6N2E2_3620 Epoxyqueuosine (oQ) reductase QueG 0.64 Pf6N2E2_2068 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) 0.34 13
Pseudomonas sp. BP01 0.54 JOY50_RS17200 queG tRNA epoxyqueuosine(34) reductase QueG 0.65 JOY50_RS10720 metH methionine synthase low > 84
Pseudomonas fluorescens FW300-N2C3 0.54 AO356_08685 epoxyqueuosine reductase 0.64 AO356_00545 methionine synthase low > 104
Pseudomonas sp. RS175 0.54 PFR28_05115 Epoxyqueuosine reductase 0.64 PFR28_01369 Methionine synthase low > 88
Pseudomonas lactucae CFBP13502 0.54 GEMAOFIL_00730 Epoxyqueuosine reductase 0.64 GEMAOFIL_02709 Methionine synthase low > 93
Pseudomonas fluorescens GW456-L13 0.54 PfGW456L13_160 Epoxyqueuosine (oQ) reductase QueG 0.64 PfGW456L13_2847 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) low > 87
Pseudomonas fluorescens FW300-N2E3 0.54 AO353_13115 epoxyqueuosine reductase 0.64 AO353_21615 methionine synthase low > 101
Pseudomonas sp. SVBP6 0.54 COO64_RS17870 queG tRNA epoxyqueuosine(34) reductase QueG 0.64 COO64_RS24910 metH methionine synthase low > 93
Pseudomonas fluorescens FW300-N1B4 0.54 Pf1N1B4_1418 Epoxyqueuosine (oQ) reductase QueG 0.64 Pf1N1B4_5661 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) 0.38 51
Pseudomonas putida KT2440 0.54 PP_4900 epoxyqueuosine reductase 0.65 PP_2375 cobalamin-dependent methionine synthase low > 96
Methylophilus sp. DMC18 0.52 GFF1249 Epoxyqueuosine reductase 0.57 GFF2281 Methionine synthase low > 43
Herbaspirillum seropedicae SmR1 0.52 HSERO_RS04220 epoxyqueuosine reductase 0.61 HSERO_RS21740 methionine synthase low > 78
Marinobacter adhaerens HP15 0.50 HP15_2505 iron-sulfur cluster binding protein 0.63 HP15_1792 B12-dependent methionine synthase low > 73
Castellaniella sp019104865 MT123 0.48 ABCV34_RS13905 tRNA epoxyqueuosine(34) reductase QueG 0.57 ABCV34_RS14560 methionine synthase low > 48
Kangiella aquimarina DSM 16071 0.48 B158DRAFT_0486 iron-sulfur cluster binding protein, putative 0.66 B158DRAFT_2466 methionine synthase (B12-dependent) (EC 2.1.1.13) low > 40
Dechlorosoma suillum PS 0.47 Dsui_3502 iron-sulfur cluster binding protein, putative 0.63 Dsui_0779 5-methyltetrahydrofolate--homocysteine methyltransferase — —
Acinetobacter radioresistens SK82 0.47 MPMX26_01783 Epoxyqueuosine reductase 0.62 MPMX26_02351 Methionine synthase low > 36
Acinetobacter baumannii LAC-4 0.46 RR41_RS11805 tRNA epoxyqueuosine(34) reductase QueG 0.62 RR41_RS08790 methionine synthase low > 55
Rhodospirillum rubrum S1H 0.33 Rru_A0279 4Fe-4S ferredoxin, iron-sulfur binding (NCBI) 0.21 Rru_A1531 5-methyltetrahydrofolate--homocysteine methyltransferase (NCBI) — —
Pedobacter sp. GW460-11-11-14-LB5 0.33 CA265_RS07695 tRNA epoxyqueuosine(34) reductase QueG 0.60 CA265_RS23440 methionine synthase 0.38 26
Magnetospirillum magneticum AMB-1 0.32 AMB_RS03995 tRNA epoxyqueuosine(34) reductase QueG 0.21 AMB_RS02225 methionine synthase — —
Xanthobacter sp. DMC5 0.32 GFF3718 Epoxyqueuosine reductase 0.61 GFF4146 Methionine synthase — —
Rhizobium sp. OAE497 0.32 ABIE40_RS01310 tRNA epoxyqueuosine(34) reductase QueG 0.59 ABIE40_RS12135 methionine synthase low > 107
Sinorhizobium meliloti 1021 0.31 SMc00406 4Fe-4S ferredoxin 0.59 SMc03112 B12-dependent methionine synthase low > 103
Mucilaginibacter yixingensis YX-36 DSM 26809 0.30 ABZR88_RS07975 tRNA epoxyqueuosine(34) reductase QueG 0.61 ABZR88_RS20930 methionine synthase low > 71
Synechococcus elongatus PCC 7942 0.29 Synpcc7942_0530 4Fe-4S cluster binding 0.23 Synpcc7942_1372 metH methionine synthase (B12-dependent) — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.29 CA264_19810 epoxyqueuosine reductase 0.60 CA264_16785 methionine synthase low > 74
Parabacteroides merdae CL09T00C40 0.26 HMPREF1078_RS06835 tRNA epoxyqueuosine(34) reductase QueG 0.49 HMPREF1078_RS14955 methionine synthase low > 61

Not shown: 32 genomes with orthologs for CSW01_01810 only; 6 genomes with orthologs for CSW01_02060 only