Conservation of cofitness between CSW01_09250 and CSW01_01980 in Vibrio cholerae E7946 ATCC 55056

73 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_09250 crossover junction endodeoxyribonuclease RuvC 1.0 CSW01_01980 transcriptional regulator Zur 0.56 8
Dickeya dianthicola 67-19 0.67 HGI48_RS10100 crossover junction endodeoxyribonuclease RuvC 0.45 HGI48_RS02740 zinc uptake transcriptional repressor Zur — —
Dickeya dianthicola ME23 0.67 DZA65_RS10515 crossover junction endodeoxyribonuclease RuvC 0.45 DZA65_RS02895 zinc uptake transcriptional repressor Zur — —
Dickeya dadantii 3937 0.66 DDA3937_RS10070 crossover junction endodeoxyribonuclease RuvC 0.46 DDA3937_RS02765 zinc uptake transcriptional repressor Zur — —
Enterobacter asburiae PDN3 0.66 EX28DRAFT_0694 Holliday junction endonuclease RuvC (EC 3.1.22.4) 0.46 EX28DRAFT_4266 Fe2+/Zn2+ uptake regulation proteins — —
Enterobacter sp. TBS_079 0.66 MPMX20_02768 Crossover junction endodeoxyribonuclease RuvC 0.45 MPMX20_00262 Zinc uptake regulation protein low > 85
Pantoea agglomerans CFBP13505 P0401 0.66 PagCFBP13505_RS02320 crossover junction endodeoxyribonuclease RuvC 0.47 PagCFBP13505_RS21200 zinc uptake transcriptional repressor Zur — —
Pantoea sp. MT58 0.66 IAI47_08440 crossover junction endodeoxyribonuclease RuvC 0.46 IAI47_17875 zinc uptake transcriptional repressor Zur low > 76
Escherichia coli ECRC98 0.66 JDDGAC_00840 ruvC crossover junction endodeoxyribonuclease RuvC 0.45 JDDGAC_16675 zur zinc uptake transcriptional repressor Zur low > 87
Escherichia fergusonii Becca 0.66 EFB2_02079 Crossover junction endodeoxyribonuclease RuvC 0.45 EFB2_04557 Zinc uptake regulation protein — —
Escherichia coli Nissle 1917 0.66 ECOLIN_RS10375 crossover junction endodeoxyribonuclease RuvC 0.45 ECOLIN_RS23350 zinc uptake transcriptional repressor Zur — —
Erwinia amylovora T8 0.66 OLJFJH_12850 crossover junction endodeoxyribonuclease RuvC 0.45 OLJFJH_03565 zinc uptake transcriptional repressor Zur low > 58
Escherichia coli ECRC62 0.66 BNILDI_15500 ruvC crossover junction endodeoxyribonuclease RuvC 0.45 BNILDI_06315 zur zinc uptake transcriptional repressor Zur — —
Escherichia coli ECOR27 0.66 NOLOHH_16710 ruvC crossover junction endodeoxyribonuclease RuvC 0.45 NOLOHH_05205 zur zinc uptake transcriptional repressor Zur — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.66 OHPLBJKB_01865 Crossover junction endodeoxyribonuclease RuvC 0.45 OHPLBJKB_03997 Zinc uptake regulation protein — —
Escherichia coli ECRC100 0.66 OKFHMN_26265 ruvC crossover junction endodeoxyribonuclease RuvC 0.45 OKFHMN_13050 zur zinc uptake transcriptional repressor Zur — —
Rahnella sp. WP5 0.66 EX31_RS11680 crossover junction endodeoxyribonuclease RuvC 0.46 EX31_RS11860 zinc uptake transcriptional repressor Zur — —
Escherichia coli ECRC102 0.66 NIAGMN_01795 ruvC crossover junction endodeoxyribonuclease RuvC 0.45 NIAGMN_10800 zur zinc uptake transcriptional repressor Zur — —
Escherichia coli BW25113 0.66 b1863 ruvC Holliday junction resolvase (NCBI) 0.45 b4046 yjbK putative regulator (VIMSS) low > 76
Escherichia coli ECRC101 0.66 MCAODC_19140 ruvC crossover junction endodeoxyribonuclease RuvC 0.45 MCAODC_03550 zur zinc uptake transcriptional repressor Zur — —
Escherichia coli ECOR38 0.66 HEPCGN_04675 ruvC crossover junction endodeoxyribonuclease RuvC 0.45 HEPCGN_11570 zur zinc uptake transcriptional repressor Zur low > 88
Pectobacterium carotovorum WPP14 0.66 HER17_RS11850 crossover junction endodeoxyribonuclease RuvC 0.48 HER17_RS18780 zinc uptake transcriptional repressor Zur low > 75
Escherichia coli ECRC99 0.66 KEDOAH_01840 ruvC crossover junction endodeoxyribonuclease RuvC 0.45 KEDOAH_15110 zur zinc uptake transcriptional repressor Zur — —
Escherichia coli BL21 0.66 ECD_01834 component of RuvABC resolvasome, endonuclease 0.45 ECD_03918 transcriptional repressor, Zn(II)-binding — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.65 GFF1644 Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) 0.45 GFF1416 Zinc uptake regulation protein ZUR — —
Klebsiella michiganensis M5al 0.64 BWI76_RS18155 crossover junction endodeoxyribonuclease RuvC 0.44 BWI76_RS01890 transcriptional regulator Zur — —
Klebsiella pneumoniae MKP103 0.64 KDGMDA_25420 crossover junction endodeoxyribonuclease RuvC 0.44 KDGMDA_10345 zinc uptake transcriptional repressor Zur low > 95
Erwinia tracheiphila HP pepo 2.2 0.63 IJEDHG_22130 ruvC crossover junction endodeoxyribonuclease RuvC 0.47 IJEDHG_08440 zur zinc uptake transcriptional repressor Zur — —
Erwinia tracheiphila SCR3 0.63 LU632_RS13420 ruvC crossover junction endodeoxyribonuclease RuvC 0.49 LU632_RS22295 zur zinc uptake transcriptional repressor Zur — —
Serratia liquefaciens MT49 0.62 IAI46_14630 crossover junction endodeoxyribonuclease RuvC 0.45 IAI46_22990 zinc uptake transcriptional repressor Zur — —
Alteromonas macleodii MIT1002 0.61 MIT1002_01331 Crossover junction endodeoxyribonuclease RuvC 0.42 MIT1002_03799 Zinc uptake regulation protein — —
Pseudomonas sp. SVBP6 0.57 COO64_RS20090 ruvC crossover junction endodeoxyribonuclease RuvC 0.33 COO64_RS02455 zur zinc uptake transcriptional repressor Zur — —
Pseudomonas fluorescens GW456-L13 0.57 PfGW456L13_1851 Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) 0.33 PfGW456L13_598 Zinc uptake regulation protein ZUR low > 87
Pseudomonas fluorescens FW300-N2E3 0.57 AO353_03590 crossover junction endodeoxyribonuclease RuvC 0.32 AO353_10910 Fur family transcriptional regulator — —
Pseudomonas fluorescens FW300-N2E2 0.57 Pf6N2E2_5535 Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) 0.34 Pf6N2E2_4166 Zinc uptake regulation protein ZUR — —
Pseudomonas fluorescens FW300-N2C3 0.57 AO356_18015 crossover junction endodeoxyribonuclease RuvC 0.33 AO356_11485 Fur family transcriptional regulator — —
Pseudomonas fluorescens FW300-N1B4 0.57 Pf1N1B4_639 Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) 0.32 Pf1N1B4_1871 Zinc uptake regulation protein ZUR — —
Pseudomonas sp. RS175 0.57 PFR28_03414 Crossover junction endodeoxyribonuclease RuvC 0.34 PFR28_04620 Zinc uptake regulation protein low > 88
Pseudomonas sp. DMC3 0.57 GFF5186 Crossover junction endodeoxyribonuclease RuvC 0.32 GFF635 Zinc uptake regulation protein low > 89
Pseudomonas stutzeri RCH2 0.57 Psest_1495 crossover junction endodeoxyribonuclease RuvC 0.31 Psest_4308 Fe2+/Zn2+ uptake regulation proteins — —
Marinobacter adhaerens HP15 0.57 HP15_2042 crossover junction endodeoxyribonuclease RuvC 0.30 HP15_3521 zinc uptake regulation protein — —
Pseudomonas fluorescens SBW25 0.57 PFLU_RS24095 crossover junction endodeoxyribonuclease RuvC 0.32 PFLU_RS00375 transcriptional repressor low > 109
Pseudomonas fluorescens SBW25-INTG 0.57 PFLU_RS24095 crossover junction endodeoxyribonuclease RuvC 0.32 PFLU_RS00375 transcriptional repressor — —
Pseudomonas segetis P6 0.56 MPMX49_01683 Crossover junction endodeoxyribonuclease RuvC 0.32 MPMX49_00325 Zinc uptake regulation protein low > 75
Pseudomonas syringae pv. syringae B728a 0.56 Psyr_1408 Holliday junction endonuclease RuvC 0.31 Psyr_0276 zinc uptake regulation protein, putative low > 86
Pseudomonas simiae WCS417 0.56 PS417_22455 crossover junction endodeoxyribonuclease RuvC 0.32 PS417_00385 Fur family transcriptional regulator — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.56 Psyr_1408 Holliday junction endonuclease RuvC 0.31 Psyr_0276 zinc uptake regulation protein, putative low > 86
Pseudomonas lactucae CFBP13502 0.56 GEMAOFIL_04643 Crossover junction endodeoxyribonuclease RuvC 0.31 GEMAOFIL_00280 Zinc uptake regulation protein — —
Pseudomonas sp. S08-1 0.55 OH686_19125 crossover junction endodeoxyribonuclease RuvC 0.32 OH686_12240 Zinc uptake regulation protein Zur low > 80
Pseudomonas aeruginosa PA14 0.55 IKLFDK_04365 crossover junction endodeoxyribonuclease RuvC 0.33 IKLFDK_25915 zinc uptake transcriptional repressor Zur — —
Pseudomonas sp. BP01 0.50 JOY50_RS01825 ruvC crossover junction endodeoxyribonuclease RuvC 0.33 JOY50_RS21130 zur zinc uptake transcriptional repressor Zur low > 84
Pseudomonas putida KT2440 0.50 PP_1215 Crossover junction endodeoxyribonuclease RuvC 0.33 PP_0119 putative zinc uptake regulation protein ZUR low > 96
Paraburkholderia bryophila 376MFSha3.1 0.49 H281DRAFT_04253 Holliday junction endonuclease RuvC 0.37 H281DRAFT_04161 ferric uptake regulator, Fur family — —
Acinetobacter radioresistens SK82 0.49 MPMX26_01780 Crossover junction endodeoxyribonuclease RuvC 0.31 MPMX26_00095 Zinc uptake regulation protein — —
Burkholderia phytofirmans PsJN 0.49 BPHYT_RS16605 crossover junction endodeoxyribonuclease RuvC 0.38 BPHYT_RS16125 Fur family transcriptional regulator — —
Acinetobacter baumannii LAC-4 0.48 RR41_RS11815 crossover junction endodeoxyribonuclease RuvC 0.31 RR41_RS18180 transcriptional repressor — —
Paraburkholderia sabiae LMG 24235 0.47 QEN71_RS26785 crossover junction endodeoxyribonuclease RuvC 0.39 QEN71_RS02580 Fur family transcriptional regulator — —
Dyella japonica UNC79MFTsu3.2 0.39 ABZR86_RS10845 crossover junction endodeoxyribonuclease RuvC 0.37 ABZR86_RS07900 transcriptional repressor — —
Xanthomonas campestris pv. campestris strain 8004 0.39 Xcc-8004.1435.1 Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) 0.36 Xcc-8004.1790.1 Zinc uptake regulation protein ZUR — —
Caulobacter crescentus NA1000 Δfur 0.37 CCNA_03346 crossover junction endodeoxyribonuclease ruvC 0.30 CCNA_00362 zinc uptake regulation protein — —
Caulobacter crescentus NA1000 0.37 CCNA_03346 crossover junction endodeoxyribonuclease ruvC 0.30 CCNA_00362 zinc uptake regulation protein low > 66
Rhodanobacter denitrificans FW104-10B01 0.37 LRK54_RS04915 crossover junction endodeoxyribonuclease RuvC 0.38 LRK54_RS01640 transcriptional repressor — —
Rhodanobacter denitrificans MT42 0.37 LRK55_RS04695 crossover junction endodeoxyribonuclease RuvC 0.38 LRK55_RS01420 transcriptional repressor — —
Lysobacter sp. OAE881 0.36 ABIE51_RS05040 crossover junction endodeoxyribonuclease RuvC 0.37 ABIE51_RS06205 transcriptional repressor — —
Sphingobium sp. HT1-2 0.36 GFF492 Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) 0.26 GFF1286 Zinc uptake regulation protein Zur low > 95
Dinoroseobacter shibae DFL-12 0.33 Dshi_1103 crossover junction endodeoxyribonuclease RuvC (RefSeq) 0.29 Dshi_1703 putative ferric uptake regulator, Fur family (RefSeq) — —
Rhizobium sp. OAE497 0.32 ABIE40_RS15730 crossover junction endodeoxyribonuclease RuvC 0.24 ABIE40_RS10935 Fur family transcriptional regulator low > 107
Magnetospirillum magneticum AMB-1 0.32 AMB_RS16260 crossover junction endodeoxyribonuclease RuvC 0.34 AMB_RS11670 transcriptional repressor — —
Castellaniella sp019104865 MT123 0.31 ABCV34_RS07975 crossover junction endodeoxyribonuclease RuvC 0.34 ABCV34_RS13430 Fur family transcriptional regulator — —
Sinorhizobium meliloti 1021 0.31 SMc03967 Holliday junction resolvase 0.23 SMc04242 zinc uptake regulation protein low > 103
Phaeobacter inhibens DSM 17395 0.31 PGA1_c05850 crossover junction endodeoxyribonuclease RuvC 0.30 PGA1_262p02230 zinc uptake regulation protein zur-like protein — —
Rhodopseudomonas palustris CGA009 0.29 TX73_005650 crossover junction endodeoxyribonuclease RuvC 0.32 TX73_002680 Fur family transcriptional regulator — —
Sphingomonas koreensis DSMZ 15582 0.29 Ga0059261_0822 Holliday junction endonuclease RuvC (EC 3.1.22.4) 0.24 Ga0059261_1545 Fe2+/Zn2+ uptake regulation proteins — —
Synechocystis sp000284455 PCC 6803 0.18 SGL_RS16875 crossover junction endodeoxyribonuclease RuvC 0.17 SGL_RS08080 Fur family transcriptional regulator — —

Not shown: 37 genomes with orthologs for CSW01_09250 only; 2 genomes with orthologs for CSW01_01980 only