Conservation of cofitness between CSW01_05255 and CSW01_01810 in Vibrio cholerae E7946 ATCC 55056

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_05255 uridine phosphorylase 1.0 CSW01_01810 tRNA epoxyqueuosine(34) reductase QueG 0.46 13
Klebsiella michiganensis M5al 0.79 BWI76_RS01295 Uridine phosphorylase (EC 2.4.2.3) (from data) 0.66 BWI76_RS02505 tRNA epoxyqueuosine(34) reductase QueG low > 92
Dickeya dianthicola ME23 0.79 DZA65_RS00885 uridine phosphorylase 0.68 DZA65_RS19710 tRNA epoxyqueuosine(34) reductase QueG low > 75
Enterobacter sp. TBS_079 0.79 MPMX20_04449 Uridine phosphorylase 0.65 MPMX20_00447 Epoxyqueuosine reductase low > 85
Enterobacter asburiae PDN3 0.79 EX28DRAFT_4496 uridine phosphorylase 0.66 EX28DRAFT_3363 epoxyqueuosine reductase low > 76
Dickeya dadantii 3937 0.79 DDA3937_RS20370 uridine phosphorylase 0.69 DDA3937_RS18645 tRNA epoxyqueuosine(34) reductase QueG low > 74
Escherichia coli ECOR38 0.79 HEPCGN_12985 udp uridine phosphorylase 0.67 HEPCGN_10515 queG tRNA epoxyqueuosine(34) reductase QueG low > 88
Escherichia fergusonii Becca 0.79 EFB2_04790 Uridine phosphorylase 0.67 EFB2_04369 Epoxyqueuosine reductase low > 86
Escherichia coli Nissle 1917 0.79 ECOLIN_RS22075 uridine phosphorylase 0.67 ECOLIN_RS24200 tRNA epoxyqueuosine(34) reductase QueG low > 55
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.79 GFF258 Uridine phosphorylase (EC 2.4.2.3) 0.67 GFF819 Epoxyqueuosine (oQ) reductase QueG low > 78
Escherichia coli BL21 0.79 ECD_03718 uridine phosphorylase 0.67 ECD_04033 epoxyqueuosine reductase, cobalamine-stimulated; queosine biosynthesis low > 61
Klebsiella pneumoniae MKP103 0.79 KDGMDA_09785 uridine phosphorylase 0.66 KDGMDA_11005 tRNA epoxyqueuosine(34) reductase QueG low > 95
Escherichia coli ECOR27 0.79 NOLOHH_06445 udp uridine phosphorylase 0.67 NOLOHH_04550 queG tRNA epoxyqueuosine(34) reductase QueG low > 76
Escherichia coli ECRC99 0.79 KEDOAH_13835 udp uridine phosphorylase 0.67 KEDOAH_15870 queG tRNA epoxyqueuosine(34) reductase QueG — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.79 OHPLBJKB_04220 Uridine phosphorylase 0.67 OHPLBJKB_03876 Epoxyqueuosine reductase 0.29 61
Escherichia coli ECRC98 0.79 JDDGAC_17940 udp uridine phosphorylase 0.67 JDDGAC_15925 queG tRNA epoxyqueuosine(34) reductase QueG low > 87
Escherichia coli ECRC100 0.79 OKFHMN_14315 udp uridine phosphorylase 0.67 OKFHMN_12285 queG tRNA epoxyqueuosine(34) reductase QueG low > 79
Escherichia coli ECRC101 0.79 MCAODC_04820 udp uridine phosphorylase 0.67 MCAODC_02800 queG tRNA epoxyqueuosine(34) reductase QueG low > 88
Escherichia coli ECRC102 0.79 NIAGMN_12070 udp uridine phosphorylase 0.67 NIAGMN_10135 queG tRNA epoxyqueuosine(34) reductase QueG 0.65 17
Escherichia coli ECRC62 0.79 BNILDI_05085 udp uridine phosphorylase 0.67 BNILDI_06940 queG tRNA epoxyqueuosine(34) reductase QueG low > 75
Escherichia coli BW25113 0.79 b3831 udp uridine phosphorylase (NCBI) 0.67 b4166 yjeS predicted Fe-S electron transport protein (NCBI) low > 76
Dickeya dianthicola 67-19 0.79 HGI48_RS00830 uridine phosphorylase 0.68 HGI48_RS18575 tRNA epoxyqueuosine(34) reductase QueG low > 71
Pantoea agglomerans CFBP13505 P0401 0.78 PagCFBP13505_RS15280 uridine phosphorylase 0.70 PagCFBP13505_RS11155 tRNA epoxyqueuosine(34) reductase QueG low > 74
Pantoea sp. MT58 0.78 IAI47_18300 uridine phosphorylase 0.70 IAI47_02560 tRNA epoxyqueuosine(34) reductase QueG low > 76
Pectobacterium carotovorum WPP14 0.78 HER17_RS20665 uridine phosphorylase 0.68 HER17_RS02555 tRNA epoxyqueuosine(34) reductase QueG low > 75
Serratia liquefaciens MT49 0.77 IAI46_01045 uridine phosphorylase 0.67 IAI46_01595 tRNA epoxyqueuosine(34) reductase QueG low > 86
Shewanella oneidensis MR-1 0.77 SO4133 udp Uridine phosphorylase (EC 2.4.2.3) (from data) 0.63 SO3861 iron-sulfur cluster-binding protein (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.77 Shewana3_3680 Uridine phosphorylase (EC 2.4.2.3) (from data) 0.64 Shewana3_0745 putative iron-sulfur cluster binding protein (RefSeq) low > 73
Shewanella loihica PV-4 0.77 Shew_3390 uridine phosphorylase (RefSeq) 0.64 Shew_2979 putative iron-sulfur cluster binding protein (RefSeq) low > 60
Rahnella sp. WP5 0.77 EX31_RS14640 uridine phosphorylase 0.66 EX31_RS08850 tRNA epoxyqueuosine(34) reductase QueG low > 89
Shewanella amazonensis SB2B 0.75 Sama_0412 Uridine phosphorylase (EC 2.4.2.3) (from data) 0.61 Sama_2625 iron-sulfur cluster-binding protein (RefSeq) low > 62
Cellulophaga baltica 18 0.16 M666_RS15645 nucleoside phosphorylase 0.31 M666_RS07680 tRNA epoxyqueuosine(34) reductase QueG low > 67
Parabacteroides merdae CL09T00C40 0.14 HMPREF1078_RS13900 nucleoside phosphorylase 0.26 HMPREF1078_RS06835 tRNA epoxyqueuosine(34) reductase QueG low > 61
Bacteroides thetaiotaomicron VPI-5482 0.13 BT4554 purine nucleoside phosphorylase II (NCBI ptt file) 0.25 BT3245 putative iron-sulfur cluster-binding protein (NCBI ptt file) low > 81
Mucilaginibacter yixingensis YX-36 DSM 26809 0.13 ABZR88_RS11980 nucleoside phosphorylase 0.30 ABZR88_RS07975 tRNA epoxyqueuosine(34) reductase QueG low > 71

Not shown: 7 genomes with orthologs for CSW01_05255 only; 66 genomes with orthologs for CSW01_01810 only