Conservation of cofitness between CSW01_11960 and CSW01_01710 in Vibrio cholerae E7946 ATCC 55056

28 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_11960 autonomous glycyl radical cofactor GrcA 1.0 CSW01_01710 Rsd/AlgQ family anti-sigma factor 0.63 1
Enterobacter sp. TBS_079 0.82 MPMX20_03448 Autonomous glycyl radical cofactor 0.29 MPMX20_00218 Regulator of sigma D low > 85
Escherichia coli Nissle 1917 0.81 ECOLIN_RS14595 autonomous glycyl radical cofactor GrcA 0.29 ECOLIN_RS23045 sigma D regulator — —
Escherichia coli ECOR38 0.81 HEPCGN_20470 grcA autonomous glycyl radical cofactor GrcA 0.29 HEPCGN_12005 rsd sigma D regulator low > 88
Escherichia fergusonii Becca 0.81 EFB2_01317 Autonomous glycyl radical cofactor 0.29 EFB2_04616 Regulator of sigma D low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.81 GFF2101 Pyruvate formate-lyase (EC 2.3.1.54) 0.29 GFF4197 Regulator of sigma D — —
Escherichia coli ECRC62 0.80 BNILDI_11820 grcA autonomous glycyl radical cofactor GrcA 0.29 BNILDI_06010 rsd sigma D regulator low > 75
Escherichia coli ECOR27 0.80 NOLOHH_13015 grcA autonomous glycyl radical cofactor GrcA 0.29 NOLOHH_05515 rsd sigma D regulator low > 76
Escherichia coli BW25113 0.80 b2579 yfiD pyruvate formate lyase subunit (NCBI) 0.29 b3995 rsd stationary phase protein, binds sigma 70 RNA polymerase subunit (NCBI) low > 76
Escherichia coli ECRC99 0.80 KEDOAH_06875 grcA autonomous glycyl radical cofactor GrcA 0.29 KEDOAH_14790 rsd sigma D regulator — —
Escherichia coli ECRC98 0.80 JDDGAC_25010 grcA autonomous glycyl radical cofactor GrcA 0.29 JDDGAC_16995 rsd sigma D regulator low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.80 OHPLBJKB_01127 Autonomous glycyl radical cofactor 0.29 OHPLBJKB_04055 Regulator of sigma D low > 74
Escherichia coli ECRC102 0.80 NIAGMN_19115 grcA autonomous glycyl radical cofactor GrcA 0.29 NIAGMN_11120 rsd sigma D regulator low > 80
Escherichia coli BL21 0.80 ECD_02473 autonomous glycyl radical cofactor 0.29 ECD_03872 stationary phase protein, binds sigma 70 RNA polymerase subunit low > 61
Escherichia coli ECRC101 0.80 MCAODC_11875 grcA autonomous glycyl radical cofactor GrcA 0.29 MCAODC_03870 rsd sigma D regulator low > 88
Enterobacter asburiae PDN3 0.80 EX28DRAFT_0068 autonomous glycyl radical cofactor GrcA 0.27 EX28DRAFT_4537 Regulator of sigma D low > 76
Escherichia coli ECRC100 0.80 OKFHMN_21345 grcA autonomous glycyl radical cofactor GrcA 0.29 OKFHMN_13370 rsd sigma D regulator low > 79
Klebsiella michiganensis M5al 0.79 BWI76_RS21375 autonomous glycyl radical cofactor GrcA 0.28 BWI76_RS01560 Rsd/AlgQ family anti-sigma factor low > 92
Klebsiella pneumoniae MKP103 0.79 KDGMDA_28500 autonomous glycyl radical cofactor GrcA 0.29 KDGMDA_10045 sigma D regulator — —
Rahnella sp. WP5 0.79 EX31_RS21780 autonomous glycyl radical cofactor GrcA 0.29 EX31_RS16820 Rsd/AlgQ family anti-sigma factor low > 89
Dickeya dadantii 3937 0.78 DDA3937_RS15785 autonomous glycyl radical cofactor GrcA 0.20 DDA3937_RS01180 Rsd/AlgQ family anti-sigma factor low > 74
Dickeya dianthicola 67-19 0.77 HGI48_RS15870 autonomous glycyl radical cofactor GrcA 0.20 HGI48_RS01175 sigma D regulator low > 71
Dickeya dianthicola ME23 0.77 DZA65_RS16950 autonomous glycyl radical cofactor GrcA 0.21 DZA65_RS01220 Rsd/AlgQ family anti-sigma factor low > 75
Pantoea agglomerans CFBP13505 P0401 0.76 PagCFBP13505_RS14720 autonomous glycyl radical cofactor GrcA 0.31 PagCFBP13505_RS22615 Rsd/AlgQ family anti-sigma factor low > 74
Pectobacterium carotovorum WPP14 0.75 HER17_RS05760 autonomous glycyl radical cofactor GrcA 0.27 HER17_RS20375 Rsd/AlgQ family anti-sigma factor low > 75
Pantoea sp. MT58 0.75 IAI47_04830 autonomous glycyl radical cofactor GrcA 0.31 IAI47_18080 Rsd/AlgQ family anti-sigma factor low > 76
Serratia liquefaciens MT49 0.73 IAI46_19615 autonomous glycyl radical cofactor GrcA 0.32 IAI46_01325 Rsd/AlgQ family anti-sigma factor low > 86
Erwinia tracheiphila SCR3 0.72 LU632_RS16965 grcA autonomous glycyl radical cofactor GrcA 0.25 LU632_RS00975 Rsd/AlgQ family anti-sigma factor low > 74
Erwinia tracheiphila HP pepo 2.2 0.72 IJEDHG_26905 grcA autonomous glycyl radical cofactor GrcA 0.25 IJEDHG_10890 rsd sigma D regulator — —

Not shown: 0 genomes with orthologs for CSW01_11960 only; 27 genomes with orthologs for CSW01_01710 only