Conservation of cofitness between CSW01_10260 and CSW01_01485 in Vibrio cholerae E7946 ATCC 55056

50 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_10260 thiol:disulfide interchange protein DsbE 1.0 CSW01_01485 transcriptional regulator 0.86 4
Escherichia coli ECOR27 0.69 NOLOHH_14885 dsbE thiol:disulfide interchange protein DsbE 0.51 NOLOHH_08635 gntR gluconate operon transcriptional repressor GntR low > 76
Escherichia coli BW25113 0.69 b2195 ccmG periplasmic thioredoxin of cytochrome c-type biogenesis (NCBI) 0.52 b3438 gntR DNA-binding transcriptional repressor (NCBI) low > 76
Escherichia coli ECRC101 0.69 MCAODC_14360 dsbE thiol:disulfide interchange protein DsbE 0.52 MCAODC_07365 gntR gluconate operon transcriptional repressor GntR low > 88
Escherichia coli ECRC100 0.69 OKFHMN_23310 dsbE thiol:disulfide interchange protein DsbE 0.52 OKFHMN_16835 gntR gluconate operon transcriptional repressor GntR low > 79
Escherichia coli ECRC98 0.69 JDDGAC_27270 dsbE thiol:disulfide interchange protein DsbE 0.52 JDDGAC_20465 gntR gluconate operon transcriptional repressor GntR low > 87
Escherichia coli BL21 0.69 ECD_02122 periplasmic thioredoxin of cytochrome c-type biogenesis 0.51 ECD_03289 d-gluconate inducible gluconate regulon transcriptional repressor low > 61
Escherichia coli ECRC62 0.69 BNILDI_13805 dsbE thiol:disulfide interchange protein DsbE 0.52 BNILDI_02870 gntR gluconate operon transcriptional repressor GntR low > 75
Escherichia fergusonii Becca 0.69 EFB2_01661 Thiol:disulfide interchange protein DsbE 0.52 EFB2_00382 HTH-type transcriptional regulator GntR low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.69 OHPLBJKB_01516 Thiol:disulfide interchange protein DsbE 0.52 OHPLBJKB_00264 HTH-type transcriptional regulator GntR low > 74
Escherichia coli Nissle 1917 0.69 ECOLIN_RS12830 thiol:disulfide interchange protein DsbE 0.52 ECOLIN_RS19675 gluconate operon transcriptional repressor GntR — —
Escherichia coli ECRC102 0.69 NIAGMN_21075 dsbE thiol:disulfide interchange protein DsbE 0.52 NIAGMN_14605 gntR gluconate operon transcriptional repressor GntR low > 80
Escherichia coli ECRC99 0.69 KEDOAH_04875 dsbE thiol:disulfide interchange protein DsbE 0.52 KEDOAH_11305 gntR gluconate operon transcriptional repressor GntR — —
Escherichia coli ECOR38 0.68 HEPCGN_22575 dsbE thiol:disulfide interchange protein DsbE 0.52 HEPCGN_15660 gntR gluconate operon transcriptional repressor GntR low > 88
Pantoea sp. MT58 0.67 IAI47_06095 DsbE family thiol:disulfide interchange protein 0.52 IAI47_01650 gluconate operon transcriptional repressor GntR low > 76
Pantoea agglomerans CFBP13505 P0401 0.66 PagCFBP13505_RS00050 DsbE family thiol:disulfide interchange protein 0.50 PagCFBP13505_RS18155 gluconate operon transcriptional repressor GntR low > 74
Klebsiella pneumoniae MKP103 0.65 KDGMDA_23840 DsbE family thiol:disulfide interchange protein 0.51 KDGMDA_07120 gluconate operon transcriptional repressor GntR low > 95
Serratia liquefaciens MT49 0.65 IAI46_18080 DsbE family thiol:disulfide interchange protein 0.54 IAI46_23965 gluconate operon transcriptional repressor GntR low > 86
Erwinia amylovora T8 0.63 OLJFJH_11105 DsbE family thiol:disulfide interchange protein 0.56 OLJFJH_04280 gluconate operon transcriptional repressor GntR low > 58
Pectobacterium carotovorum WPP14 0.63 HER17_RS09060 DsbE family thiol:disulfide interchange protein 0.52 HER17_RS01450 gluconate operon transcriptional repressor GntR low > 75
Rahnella sp. WP5 0.62 EX31_RS19740 DsbE family thiol:disulfide interchange protein 0.54 EX31_RS05060 gluconate operon transcriptional repressor GntR low > 89
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.61 GFF4876 Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase 0.49 GFF570 Gluconate utilization system Gnt-I transcriptional repressor — —
Pseudomonas aeruginosa PA14 0.49 IKLFDK_07045 thiol:disulfide interchange protein DsbE 0.36 IKLFDK_11375 LacI family DNA-binding transcriptional regulator GntR — —
Pseudomonas sp. SVBP6 0.48 COO64_RS25720 DsbE family thiol:disulfide interchange protein 0.34 COO64_RS25590 LacI family DNA-binding transcriptional regulator — —
Pseudomonas putida KT2440 0.48 PP_4321 holocytochrome c synthetase subunit 0.31 PP_3415 Transcriptional regulator, LacI family — —
Pseudomonas sp. BP01 0.47 JOY50_RS00475 DsbE family thiol:disulfide interchange protein 0.31 JOY50_RS23605 LacI family DNA-binding transcriptional regulator — —
Pseudomonas stutzeri RCH2 0.45 Psest_1760 periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 0.34 Psest_2126 Transcriptional regulators — —
Pseudomonas segetis P6 0.43 MPMX49_03106 Thiol:disulfide interchange protein DsbE 0.33 MPMX49_02373 HTH-type transcriptional regulator GntR — —
Pseudomonas syringae pv. syringae B728a 0.42 Psyr_3387 Periplasmic protein thiol:disulfide oxidoreductase DsbE 0.32 Psyr_3336 transcriptional regulator, LacI family — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.42 Psyr_3387 Periplasmic protein thiol:disulfide oxidoreductase DsbE 0.32 Psyr_3336 transcriptional regulator, LacI family — —
Pseudomonas fluorescens FW300-N2E3 0.41 AO353_18880 thiol:disulfide interchange protein 0.33 AO353_03255 LacI family transcriptional regulator — —
Pseudomonas fluorescens FW300-N2E2 0.41 Pf6N2E2_2554 Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase 0.34 Pf6N2E2_2865 Gluconate utilization system Gnt-I transcriptional repressor — —
Pseudomonas fluorescens FW300-N2C3 0.41 AO356_03630 thiol:disulfide interchange protein 0.34 AO356_05065 LacI family transcriptional regulator — —
Pseudomonas sp. DMC3 0.40 GFF2491 Thiol:disulfide interchange protein DsbE 0.33 GFF5268 HTH-type transcriptional regulator GntR — —
Pseudomonas simiae WCS417 0.40 PS417_08720 thiol:disulfide interchange protein 0.33 PS417_21990 LacI family transcriptional regulator — —
Pseudomonas lactucae CFBP13502 0.40 GEMAOFIL_01876 Thiol:disulfide interchange protein DsbE 0.34 GEMAOFIL_04536 HTH-type transcriptional regulator GntR — —
Pseudomonas fluorescens SBW25-INTG 0.40 PFLU_RS08675 DsbE family thiol:disulfide interchange protein 0.34 PFLU_RS23595 LacI family DNA-binding transcriptional regulator low > 109
Pseudomonas fluorescens SBW25 0.40 PFLU_RS08675 DsbE family thiol:disulfide interchange protein 0.34 PFLU_RS23595 LacI family DNA-binding transcriptional regulator low > 109
Pseudomonas fluorescens GW456-L13 0.40 PfGW456L13_4310 Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase 0.34 PfGW456L13_1925 Gluconate utilization system Gnt-I transcriptional repressor — —
Pseudomonas fluorescens FW300-N1B4 0.40 Pf1N1B4_3645 Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase 0.35 Pf1N1B4_558 Gluconate utilization system Gnt-I transcriptional repressor — —
Pseudomonas sp. RS175 0.38 PFR28_00871 Thiol:disulfide interchange protein DsbE 0.34 PFR28_00593 HTH-type transcriptional regulator GntR — —
Alteromonas macleodii MIT1002 0.36 MIT1002_00966 Cytochrome c biogenesis protein CcmG 0.31 MIT1002_03475 Gluconate utilization system GNT-I transcriptional repressor — —
Dinoroseobacter shibae DFL-12 0.33 Dshi_3410 periplasmic protein thiol--disulphide oxidoreductase DsbE (RefSeq) 0.27 Dshi_3322 transcriptional regulator, LacI family (RefSeq) low > 64
Phaeobacter inhibens DSM 17395 0.33 PGA1_c18860 thiol:disulfide interchange protein CcmG 0.28 PGA1_c33870 putative HTH-type transcriptional regulator GntR — —
Sinorhizobium meliloti 1021 0.33 SMc03851 thiol:disulfide interchange protein (cytochrome C biogenesis protein) 0.29 SM_b20667 LacI family transcriptional regulator — —
Azospirillum brasilense Sp245 0.32 AZOBR_RS00745 thiol oxidoreductase DsbE 0.31 AZOBR_RS15720 LacI family transcription regulator — —
Xanthobacter sp. DMC5 0.31 GFF973 Thiol:disulfide interchange protein CycY 0.31 GFF1533 HTH-type transcriptional regulator GntR — —
Rhizobium sp. OAE497 0.30 ABIE40_RS18300 DsbE family thiol:disulfide interchange protein 0.25 ABIE40_RS04445 LacI family DNA-binding transcriptional regulator low > 107
Azospirillum sp. SherDot2 0.30 MPMX19_02534 Thiol:disulfide interchange protein DsbE 0.29 MPMX19_05332 HTH-type transcriptional regulator GntR — —
Ralstonia solanacearum GMI1000 0.16 RS_RS13925 alkyl hydroperoxide reductase 0.26 RS_RS24865 LacI family DNA-binding transcriptional regulator low > 80
Hydrogenophaga sp. GW460-11-11-14-LB1 0.15 GFF5187 Thiol:disulfide oxidoreductase TlpA 0.30 GFF5509 Gluconate utilization system Gnt-I transcriptional repressor — —

Not shown: 25 genomes with orthologs for CSW01_10260 only; 22 genomes with orthologs for CSW01_01485 only