Conservation of cofitness between CSW01_10520 and CSW01_01480 in Vibrio cholerae E7946 ATCC 55056

67 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_10520 Aspartate-semialdehyde dehydrogenase 2 1.0 CSW01_01480 phosphogluconate dehydratase 0.63 2
Shewanella amazonensis SB2B 0.72 Sama_2152 aspartate-semialdehyde dehydrogenase (RefSeq) 0.53 Sama_1810 phosphogluconate dehydratase (RefSeq) — —
Shewanella loihica PV-4 0.71 Shew_2308 aspartate-semialdehyde dehydrogenase (RefSeq) 0.54 Shew_2046 phosphogluconate dehydratase (RefSeq) — —
Shewanella oneidensis MR-1 0.71 SO3070 asd aspartate semialdehyde dehydrogenese (NCBI ptt file) 0.54 SO2487 edd 6-phosphogluconate dehydratase (NCBI ptt file) — —
Shewanella sp. ANA-3 0.71 Shewana3_1477 aspartate semialdehyde dehydrogenase (RefSeq) 0.54 Shewana3_2149 phosphogluconate dehydratase (RefSeq) — —
Alteromonas macleodii MIT1002 0.67 MIT1002_02531 Aspartate-semialdehyde dehydrogenase 2 0.52 MIT1002_02405 Phosphogluconate dehydratase low > 70
Dyella japonica UNC79MFTsu3.2 0.59 ABZR86_RS08030 aspartate-semialdehyde dehydrogenase 0.50 ABZR86_RS14690 phosphogluconate dehydratase — —
Rhodanobacter denitrificans FW104-10B01 0.58 LRK54_RS01715 aspartate-semialdehyde dehydrogenase 0.50 LRK54_RS07880 phosphogluconate dehydratase — —
Rhodanobacter denitrificans MT42 0.58 LRK55_RS01495 aspartate-semialdehyde dehydrogenase 0.50 LRK55_RS07610 phosphogluconate dehydratase — —
Lysobacter sp. OAE881 0.57 ABIE51_RS08235 aspartate-semialdehyde dehydrogenase 0.45 ABIE51_RS01610 phosphogluconate dehydratase — —
Rhodanobacter sp. FW510-T8 0.57 OKGIIK_04815 asd aspartate-semialdehyde dehydrogenase 0.50 OKGIIK_14370 edd phosphogluconate dehydratase — —
Rhodanobacter sp000427505 FW510-R12 0.57 LRK53_RS08320 aspartate-semialdehyde dehydrogenase 0.51 LRK53_RS00665 phosphogluconate dehydratase — —
Xanthomonas campestris pv. campestris strain 8004 0.56 Xcc-8004.1957.1 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) 0.49 Xcc-8004.2447.1 Phosphogluconate dehydratase (EC 4.2.1.12) — —
Agrobacterium fabrum C58 0.50 Atu2490 aspartate-semialdehyde dehydrogenase 0.51 Atu0598 phosphogluconate dehydratase — —
Rhizobium sp. OAE497 0.49 ABIE40_RS19095 aspartate-semialdehyde dehydrogenase 0.51 ABIE40_RS03190 phosphogluconate dehydratase — —
Rahnella sp. WP5 0.49 EX31_RS19605 aspartate-semialdehyde dehydrogenase 0.54 EX31_RS16630 phosphogluconate dehydratase low > 89
Sphingomonas koreensis DSMZ 15582 0.48 Ga0059261_4003 aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) 0.47 Ga0059261_0354 6-phosphogluconate dehydratase (EC 4.2.1.12) — —
Serratia liquefaciens MT49 0.48 IAI46_17845 aspartate-semialdehyde dehydrogenase 0.54 IAI46_23175 phosphogluconate dehydratase low > 87
Sinorhizobium meliloti 1021 0.48 SMc04410 aspartate-semialdehyde dehydrogenase 0.49 SMc03068 phosphogluconate dehydratase — —
Brevundimonas sp. GW460-12-10-14-LB2 0.47 A4249_RS12690 aspartate-semialdehyde dehydrogenase 0.50 A4249_RS10735 phosphogluconate dehydratase — —
Azospirillum sp. SherDot2 0.47 MPMX19_02000 Aspartate-semialdehyde dehydrogenase 2 0.50 MPMX19_05118 Phosphogluconate dehydratase — —
Sphingobium sp. HT1-2 0.47 GFF4966 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) 0.51 GFF1593 Phosphogluconate dehydratase (EC 4.2.1.12) — —
Xanthobacter sp. DMC5 0.47 GFF2437 Aspartate-semialdehyde dehydrogenase 2 0.46 GFF3887 Phosphogluconate dehydratase — —
Caulobacter crescentus NA1000 Δfur 0.46 CCNA_00253 aspartate-semialdehyde dehydrogenase 0.47 CCNA_02134 phosphogluconate dehydratase low > 67
Caulobacter crescentus NA1000 0.46 CCNA_00253 aspartate-semialdehyde dehydrogenase 0.47 CCNA_02134 phosphogluconate dehydratase low > 66
Escherichia fergusonii Becca 0.45 EFB2_01539 USG-1 protein 0.54 EFB2_02092 Phosphogluconate dehydratase low > 86
Escherichia coli ECOR27 0.45 NOLOHH_14300 usg aspartate-semialdehyde dehydrogenase 0.54 NOLOHH_16850 edd phosphogluconate dehydratase low > 76
Escherichia coli ECRC62 0.45 BNILDI_13220 usg aspartate-semialdehyde dehydrogenase 0.54 BNILDI_15645 edd phosphogluconate dehydratase low > 75
Escherichia coli ECOR38 0.45 HEPCGN_21870 usg aspartate-semialdehyde dehydrogenase 0.54 HEPCGN_04745 edd phosphogluconate dehydratase low > 88
Escherichia coli BL21 0.45 ECD_02244 putative semialdehyde dehydrogenase 0.54 ECD_01822 6-phosphogluconate dehydratase low > 61
Escherichia coli Nissle 1917 0.45 ECOLIN_RS13440 aspartate-semialdehyde dehydrogenase 0.54 ECOLIN_RS10310 phosphogluconate dehydratase — —
Escherichia coli ECRC99 0.45 KEDOAH_05530 usg aspartate-semialdehyde dehydrogenase 0.54 KEDOAH_01765 edd phosphogluconate dehydratase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.45 OHPLBJKB_01386 USG-1 protein 0.54 OHPLBJKB_01878 Phosphogluconate dehydratase low > 74
Escherichia coli BW25113 0.45 b2319 usg hypothetical protein (NCBI) 0.54 b1851 edd phosphogluconate dehydratase (NCBI) low > 76
Escherichia coli ECRC101 0.45 MCAODC_13705 usg aspartate-semialdehyde dehydrogenase 0.54 MCAODC_19065 edd phosphogluconate dehydratase low > 87
Escherichia coli ECRC98 0.45 JDDGAC_26625 usg aspartate-semialdehyde dehydrogenase 0.54 JDDGAC_00915 edd phosphogluconate dehydratase — —
Escherichia coli ECRC100 0.45 OKFHMN_22665 usg aspartate-semialdehyde dehydrogenase 0.54 OKFHMN_26340 edd phosphogluconate dehydratase low > 79
Escherichia coli ECRC102 0.45 NIAGMN_20440 usg aspartate-semialdehyde dehydrogenase 0.54 NIAGMN_01720 edd phosphogluconate dehydratase low > 80
Phaeobacter inhibens DSM 17395 0.45 PGA1_c31480 aspartate-semialdehyde dehydrogenase Asd 0.49 PGA1_c28000 phosphogluconate dehydratase Edd — —
Dinoroseobacter shibae DFL-12 0.44 Dshi_3240 aspartate-semialdehyde dehydrogenase (RefSeq) 0.47 Dshi_1769 6-phosphogluconate dehydratase (RefSeq) — —
Klebsiella pneumoniae MKP103 0.44 KDGMDA_27220 aspartate-semialdehyde dehydrogenase 0.54 KDGMDA_25365 phosphogluconate dehydratase low > 95
Enterobacter sp. TBS_079 0.44 MPMX20_03254 USG-1 protein 0.54 MPMX20_02756 Phosphogluconate dehydratase low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.44 GFF1935 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) 0.54 GFF1630 Phosphogluconate dehydratase (EC 4.2.1.12) low > 78
Klebsiella michiganensis M5al 0.44 BWI76_RS20385 aspartate-semialdehyde dehydrogenase 0.53 BWI76_RS18100 phosphogluconate dehydratase low > 92
Enterobacter asburiae PDN3 0.42 EX28DRAFT_0285 Aspartate-semialdehyde dehydrogenase 0.54 EX28DRAFT_0705 6-phosphogluconate dehydratase (EC 4.2.1.12) low > 76
Pseudomonas fluorescens FW300-N2E2 0.41 Pf6N2E2_68 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) 0.51 Pf6N2E2_2898 Phosphogluconate dehydratase (EC 4.2.1.12) — —
Pseudomonas sp. RS175 0.41 PFR28_02819 USG-1 protein 0.51 PFR28_00561 Phosphogluconate dehydratase low > 88
Pseudomonas fluorescens FW300-N2C3 0.40 AO356_21425 aspartate-semialdehyde dehydrogenase 0.51 AO356_05220 phosphogluconate dehydratase — —
Pseudomonas fluorescens GW456-L13 0.40 PfGW456L13_3943 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) 0.51 PfGW456L13_1889 Phosphogluconate dehydratase (EC 4.2.1.12) low > 87
Pseudomonas sp. DMC3 0.39 GFF790 USG-1 protein 0.51 GFF5152 Phosphogluconate dehydratase low > 89
Pseudomonas sp. SVBP6 0.38 COO64_RS05640 aspartate-semialdehyde dehydrogenase 0.51 COO64_RS04535 edd phosphogluconate dehydratase — —
Pseudomonas fluorescens FW300-N1B4 0.38 Pf1N1B4_10 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) 0.51 Pf1N1B4_601 Phosphogluconate dehydratase (EC 4.2.1.12) — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.38 Psyr_1660 Aspartate-semialdehyde dehydrogenase 0.51 Psyr_1109 6-phosphogluconate dehydratase low > 86
Pseudomonas syringae pv. syringae B728a 0.38 Psyr_1660 Aspartate-semialdehyde dehydrogenase 0.51 Psyr_1109 6-phosphogluconate dehydratase low > 86
Pseudomonas fluorescens FW300-N2E3 0.38 AO353_20645 aspartate-semialdehyde dehydrogenase 0.52 AO353_03420 phosphogluconate dehydratase low > 101
Pseudomonas lactucae CFBP13502 0.38 GEMAOFIL_03943 USG-1 protein 0.52 GEMAOFIL_04692 Phosphogluconate dehydratase 0.49 77
Pseudomonas orientalis W4I3 0.38 QF045_RS20715 aspartate-semialdehyde dehydrogenase 0.52 QF045_RS24860 phosphogluconate dehydratase low > 93
Pseudomonas simiae WCS417 0.37 PS417_18575 aspartate-semialdehyde dehydrogenase 0.52 PS417_22690 phosphogluconate dehydratase low > 88
Pseudomonas fluorescens SBW25 0.37 PFLU_RS20555 aspartate-semialdehyde dehydrogenase 0.52 PFLU_RS24330 phosphogluconate dehydratase 0.41 80
Pseudomonas fluorescens SBW25-INTG 0.37 PFLU_RS20555 aspartate-semialdehyde dehydrogenase 0.52 PFLU_RS24330 phosphogluconate dehydratase low > 109
Pseudomonas putida KT2440 0.36 PP_1992 aspartate-semialdehyde dehydrogenase 0.51 PP_1010 phosphogluconate dehydratase — —
Pseudomonas sp. S08-1 0.36 OH686_04460 Aspartate-semialdehyde dehydrogenase 0.51 OH686_02490 phosphogluconate dehydratase low > 80
Pseudomonas sp. BP01 0.36 JOY50_RS16605 aspartate-semialdehyde dehydrogenase 0.51 JOY50_RS11390 edd phosphogluconate dehydratase low > 84
Pseudomonas segetis P6 0.35 ACVTMO_RS15205 aspartate-semialdehyde dehydrogenase 0.51 ACVTMO_RS14075 edd phosphogluconate dehydratase — —
Pseudomonas aeruginosa PUPa3 0.34 DQ20_RS34210 aspartate-semialdehyde dehydrogenase 0.51 DQ20_RS40090 edd;go_function=phosphogluconate phosphogluconate dehydratase low > 101
Pseudomonas aeruginosa MRSN321 0.34 DY961_RS01345 aspartate-semialdehyde dehydrogenase 0.51 DY961_RS00950 edd;go_function=phosphogluconate phosphogluconate dehydratase low > 100
Pseudomonas aeruginosa PA14 0.34 IKLFDK_15855 aspartate-semialdehyde dehydrogenase 0.51 IKLFDK_16230 phosphogluconate dehydratase — —
Pseudomonas stutzeri RCH2 0.31 Psest_2587 Aspartate-semialdehyde dehydrogenase 0.52 Psest_0849 6-phosphogluconate dehydratase low > 67

Not shown: 34 genomes with orthologs for CSW01_10520 only; 18 genomes with orthologs for CSW01_01480 only