Conservation of cofitness between CSW01_12815 and CSW01_01440 in Vibrio cholerae E7946 ATCC 55056

22 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_12815 RNA polymerase sigma-54 factor 1.0 CSW01_01440 lysine:cadaverine antiporter 0.58 7
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.63 GFF2946 RNA polymerase sigma-54 factor RpoN 0.69 GFF2451 Lysine/cadaverine antiporter membrane protein CadB low > 78
Klebsiella pneumoniae MKP103 0.63 KDGMDA_06080 RNA polymerase factor sigma-54 0.69 KDGMDA_15470 cadaverine/lysine antiporter low > 95
Escherichia fergusonii Becca 0.63 EFB2_00621 RNA polymerase sigma-54 factor 0.67 EFB2_04450 putative cadaverine/lysine antiporter — —
Escherichia coli Nissle 1917 0.63 ECOLIN_RS18425 RNA polymerase factor sigma-54 0.67 ECOLIN_RS23910 cadaverine/lysine antiporter — —
Escherichia coli ECRC62 0.63 BNILDI_01795 rpoN RNA polymerase factor sigma-54 0.67 BNILDI_06755 cadB cadaverine/lysine antiporter — —
Escherichia coli ECRC99 0.63 KEDOAH_10210 rpoN RNA polymerase factor sigma-54 0.67 KEDOAH_15695 cadB cadaverine/lysine antiporter — —
Escherichia coli ECRC98 0.63 JDDGAC_21565 rpoN RNA polymerase factor sigma-54 0.67 JDDGAC_16105 cadB cadaverine/lysine antiporter — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.63 OHPLBJKB_00498 RNA polymerase sigma-54 factor 0.67 OHPLBJKB_03911 putative cadaverine/lysine antiporter — —
Escherichia coli BL21 0.63 ECD_03067 RNA polymerase, sigma 54 (sigma N) factor 0.67 ECD_04003 putative lysine/cadaverine transporter low > 61
Escherichia coli ECRC101 0.63 MCAODC_08460 rpoN RNA polymerase factor sigma-54 0.67 MCAODC_02980 cadB cadaverine/lysine antiporter — —
Escherichia coli ECOR38 0.63 HEPCGN_16815 rpoN RNA polymerase factor sigma-54 0.67 HEPCGN_11105 cadB cadaverine/lysine antiporter — —
Escherichia coli ECRC100 0.63 OKFHMN_17940 rpoN RNA polymerase factor sigma-54 0.67 OKFHMN_12470 cadB cadaverine/lysine antiporter — —
Escherichia coli ECRC102 0.63 NIAGMN_15700 rpoN RNA polymerase factor sigma-54 0.67 NIAGMN_10315 cadB cadaverine/lysine antiporter — —
Escherichia coli ECOR27 0.62 NOLOHH_09740 rpoN RNA polymerase factor sigma-54 0.67 NOLOHH_04735 cadB cadaverine/lysine antiporter — —
Escherichia coli BW25113 0.62 b3202 rpoN DNA-directed RNA polymerase subunit N (NCBI) 0.67 b4132 cadB predicted lysine/cadaverine transporter (NCBI) — —
Klebsiella michiganensis M5al 0.62 BWI76_RS25265 RNA polymerase factor sigma-54 0.69 BWI76_RS07190 lysine/cadaverine antiporter — —
Serratia liquefaciens MT49 0.62 IAI46_22470 RNA polymerase factor sigma-54 0.69 IAI46_20150 cadaverine/lysine antiporter — —
Pectobacterium carotovorum WPP14 0.62 HER17_RS20060 RNA polymerase factor sigma-54 0.06 HER17_RS01200 amino acid permease low > 75
Pseudomonas aeruginosa PA14 0.57 IKLFDK_01770 RNA polymerase factor sigma-54 0.26 IKLFDK_08845 amino acid permease — —
Pseudomonas sp. S08-1 0.56 OH686_08540 RNA polymerase sigma-54 factor 0.26 OH686_03555 Lysine/cadaverine antiporter membrane protein CadB — —
Rhodanobacter sp000427505 FW510-R12 0.37 LRK53_RS15705 RNA polymerase factor sigma-54 0.16 LRK53_RS05480 amino acid permease low > 59
Sphingomonas koreensis DSMZ 15582 0.28 Ga0059261_2543 RNA polymerase, sigma 54 subunit, RpoN/SigL 0.20 Ga0059261_0539 Amino acid transporters low > 68

Not shown: 91 genomes with orthologs for CSW01_12815 only; 0 genomes with orthologs for CSW01_01440 only