Conservation of cofitness between CSW01_09555 and CSW01_01350 in Vibrio cholerae E7946 ATCC 55056

27 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_09555 tRNA-(ms[2]io[6]A)-hydroxylase 1.0 CSW01_01350 polysaccharide biosynthesis protein 0.80 6
Dickeya dadantii 3937 0.69 DDA3937_RS05765 tRNA-(ms[2]io[6]A)-hydroxylase 0.77 DDA3937_RS03410 polysaccharide biosynthesis protein low > 74
Enterobacter asburiae PDN3 0.61 EX28DRAFT_3463 Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA 0.49 EX28DRAFT_0519 Predicted nucleoside-diphosphate sugar epimerases low > 76
Shewanella amazonensis SB2B 0.59 Sama_1218 tRNA-hydroxylase (RefSeq) 0.51 Sama_2244 polysaccharide biosynthesis protein (RefSeq) low > 62
Shewanella oneidensis MR-1 0.57 SO1788 miaE tRNA-(MS[2]IO[6]A)-hydroxylase (NCBI ptt file) 0.49 SO3171 polysaccharide biosynthesis protein (NCBI ptt file) low > 76
Marinobacter adhaerens HP15 0.35 HP15_2202 tRNA-(ms(2)io(6)a)-hydroxylase 0.47 HP15_2383 nucleotide sugar epimerase/dehydratase low > 73
Pseudomonas aeruginosa PA14 0.34 IKLFDK_08660 tRNA-(ms[2]io[6]A)-hydroxylase 0.43 IKLFDK_16005 nucleotide sugar epimerase/dehydratase WbpM low > 100
Pseudomonas sp. SVBP6 0.34 COO64_RS09940 tRNA-(ms[2]io[6]A)-hydroxylase 0.40 COO64_RS06660 nucleoside-diphosphate sugar epimerase/dehydratase low > 93
Pseudomonas sp. BP01 0.33 JOY50_RS12775 tRNA-(ms[2]io[6]A)-hydroxylase 0.43 JOY50_RS16050 nucleoside-diphosphate sugar epimerase/dehydratase low > 84
Pseudomonas simiae WCS417 0.32 PS417_14975 tRNA hydroxylase 0.41 PS417_08190 membrane protein low > 88
Pseudomonas putida KT2440 0.32 PP_2188 putative tRNA-(Ms(2)io(6)a)-hydroxylase 0.42 PP_1805 Polysaccharide biosynthesis protein low > 96
Pseudomonas segetis P6 0.32 MPMX49_02239 hypothetical protein 0.41 MPMX49_02884 UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase low > 75
Pseudomonas sp. DMC3 0.32 GFF1701 hypothetical protein 0.43 GFF4653 UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase low > 89
Pseudomonas fluorescens GW456-L13 0.32 PfGW456L13_3375 tRNA-(ms[2]io[6]A)-hydroxylase (EC 1.-.-.-) 0.42 PfGW456L13_2191 nucleotide sugar epimerase/dehydratase WbpM low > 87
Pseudomonas sp. S08-1 0.32 OH686_03955 tRNA-(ms[2]io[6]A)-hydroxylase 0.45 OH686_20915 nucleotide sugar epimerase/dehydratase WbpM low > 80
Pseudomonas fluorescens FW300-N2E3 0.32 AO353_22955 tRNA hydroxylase 0.42 AO353_01970 hypothetical protein low > 101
Pseudomonas lactucae CFBP13502 0.32 GEMAOFIL_03299 hypothetical protein 0.44 GEMAOFIL_01779 UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase low > 93
Pseudomonas stutzeri RCH2 0.31 Psest_2306 Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA 0.42 Psest_1825 Predicted nucleoside-diphosphate sugar epimerases low > 67
Pseudomonas fluorescens SBW25 0.31 PFLU_RS17005 tRNA hydroxylase 0.42 PFLU_RS08190 polysaccharide biosynthesis protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.31 PFLU_RS17005 tRNA hydroxylase 0.42 PFLU_RS08190 polysaccharide biosynthesis protein low > 109
Pseudomonas fluorescens FW300-N2C3 0.31 AO356_24405 tRNA hydroxylase 0.42 AO356_03345 hypothetical protein low > 104
Acinetobacter radioresistens SK82 0.31 MPMX26_02151 hypothetical protein 0.36 MPMX26_00062 UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase low > 36
Pseudomonas sp. RS175 0.31 PFR28_02373 hypothetical protein 0.42 PFR28_00932 UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase 0.39 16
Pseudomonas fluorescens FW300-N2E2 0.31 Pf6N2E2_568 tRNA-(ms[2]io[6]A)-hydroxylase (EC 1.-.-.-) 0.42 Pf6N2E2_2506 nucleotide sugar epimerase/dehydratase WbpM low > 103
Pseudomonas syringae pv. syringae B728a ΔmexB 0.30 Psyr_1728 tRNA--hydroxylase 0.41 Psyr_3636 Polysaccharide biosynthesis protein CapD low > 86
Pseudomonas syringae pv. syringae B728a 0.30 Psyr_1728 tRNA--hydroxylase 0.41 Psyr_3636 Polysaccharide biosynthesis protein CapD low > 86
Mucilaginibacter yixingensis YX-36 DSM 26809 0.17 ABZR88_RS01640 tRNA-(ms[2]io[6]A)-hydroxylase 0.26 ABZR88_RS12725 nucleoside-diphosphate sugar epimerase/dehydratase low > 71
Pontibacter actiniarum KMM 6156, DSM 19842 0.16 CA264_05350 tRNA 2-methylthio-N6-isopentenyl adenosine(37) hydroxylase MiaE 0.25 CA264_12325 polysaccharide biosynthesis protein low > 74

Not shown: 16 genomes with orthologs for CSW01_09555 only; 39 genomes with orthologs for CSW01_01350 only