| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_19040 | | FAD-binding oxidoreductase | 1.0 | CSW01_01285 | | perosamine synthetase | 0.63 | 16 |
| Pseudomonas sp. SVBP6 | 0.53 | COO64_RS15320 | | FAD-binding and (Fe-S)-binding domain-containing protein | 0.22 | COO64_RS21480 | vioA | dTDP-4-amino-4,6-dideoxy-D-glucose aminotransferase VioA | low | > 93 |
| Pseudomonas fluorescens FW300-N2C3 | 0.53 | AO356_07570 | | 4Fe-4S ferredoxin | 0.22 | AO356_03965 | | aminotransferase | low | > 104 |
| Pseudomonas fluorescens FW300-N2E2 | 0.53 | Pf6N2E2_3385 | | Predicted D-lactate dehydrogenase, Fe-S protein, FAD/FMN-containing | 0.23 | Pf6N2E2_2610 | | Bacillosamine/Legionaminic acid biosynthesis aminotransferase PglE; 4-keto-6-deoxy-N-Acetyl-D-hexosaminyl-(Lipid carrier) aminotransferase | low | > 103 |
| Pseudomonas sp. RS175 | 0.52 | PFR28_00059 | | hypothetical protein | 0.23 | PFR28_00919 | | UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.52 | PfGW456L13_5118 | | D-lactate dehydrogenase (quinone), FeS subunit (EC 1.1.5.12) (from data) | 0.37 | PfGW456L13_4375 | | perosamine synthetase | low | > 87 |
| Pseudomonas sp. DMC3 | 0.52 | GFF4959 | | hypothetical protein | 0.21 | GFF2433 | | UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase | low | > 89 |
| Pseudomonas fluorescens FW300-N2E3 | 0.52 | AO353_05720 | | 4Fe-4S ferredoxin | 0.25 | AO353_25530 | | UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase | low | > 101 |
| Pseudomonas simiae WCS417 | 0.52 | PS417_24110 | | 4Fe-4S ferredoxin | 0.21 | PS417_27245 | | aminotransferase DegT | low | > 88 |
| Pseudomonas sp. BP01 | 0.52 | JOY50_RS26695 | | FAD-binding and (Fe-S)-binding domain-containing protein | 0.22 | JOY50_RS13135 | | DegT/DnrJ/EryC1/StrS aminotransferase family protein | low | > 84 |
| Pseudomonas lactucae CFBP13502 | 0.52 | GEMAOFIL_04972 | | hypothetical protein | 0.21 | GEMAOFIL_05587 | | UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase | low | > 93 |
| Pseudomonas fluorescens FW300-N1B4 | 0.52 | Pf1N1B4_1190 | | Predicted D-lactate dehydrogenase, Fe-S protein, FAD/FMN-containing | 0.22 | Pf1N1B4_3586 | | DegT/DnrJ/EryC1/StrS aminotransferase | low | > 87 |
| Pseudomonas stutzeri RCH2 | 0.52 | Psest_0951 | | FAD/FMN-containing dehydrogenases | 0.22 | Psest_1811 | | UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase | — | — |
| Pseudomonas aeruginosa PA14 | 0.51 | IKLFDK_29730 | | 4Fe-4S ferredoxin | 0.25 | IKLFDK_18130 | | UDP-4-amino-4-deoxy-L-arabinose aminotransferase | low | > 100 |
| Marinobacter adhaerens HP15 | 0.50 | HP15_4091 | | oxidoreductase, FAD/iron-sulfur cluster-binding domain protein | 0.23 | HP15_2398 | | aminotransferase, DegT/DnrJ/EryC1/StrS family | — | — |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.50 | DVU0253 | | oxidoreductase, FAD/iron-sulfur cluster-binding domain protein (TIGR) | 0.24 | DVU3010 | lpsC | aminotransferase, DegT/DnrJ/EryC1/StrS family (TIGR) | low | > 55 |
| Azospirillum brasilense Sp245 | 0.50 | AZOBR_RS25120 | | 4Fe-4S ferredoxin | 0.21 | AZOBR_RS33605 | | erythromycin biosynthesis sensory transduction protein eryC1 | low | > 97 |
| Desulfovibrio vulgaris Miyazaki F | 0.49 | DvMF_2196 | | FAD linked oxidase domain protein (RefSeq) | 0.21 | DvMF_1891 | | Glutamine--scyllo-inositol transaminase (RefSeq) | low | > 51 |
| Rhodospirillum rubrum S1H | 0.49 | Rru_A1410 | | 4Fe-4S ferredoxin (NCBI) | 0.21 | Rru_A2746 | | DegT/DnrJ/EryC1/StrS aminotransferase (NCBI) | low | > 58 |
| Magnetospirillum magneticum AMB-1 | 0.48 | AMB_RS20900 | | FAD-binding oxidoreductase | 0.28 | AMB_RS00275 | | DegT/DnrJ/EryC1/StrS family aminotransferase | — | — |
| Shewanella amazonensis SB2B | 0.40 | Sama_2440 | | iron-sulfur cluster-binding protein (RefSeq) | 0.27 | Sama_2329 | | pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis (RefSeq) | low | > 62 |
| Bacteroides stercoris CC31F | 0.40 | HMPREF1181_RS03030 | | FAD-binding oxidoreductase | 0.18 | HMPREF1181_RS14960 | | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | low | > 56 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.39 | ABZR88_RS15005 | | FAD-binding and (Fe-S)-binding domain-containing protein | 0.28 | ABZR88_RS12735 | | DegT/DnrJ/EryC1/StrS aminotransferase family protein | low | > 71 |
| Shewanella sp. ANA-3 | 0.39 | Shewana3_2905 | | FAD linked oxidase domain-containing protein (RefSeq) | 0.23 | Shewana3_1303 | | polysaccharide biosynthesis protein (RefSeq) | low | > 73 |
| Shewanella loihica PV-4 | 0.39 | Shew_3136 | | FAD linked oxidase domain-containing protein (RefSeq) | 0.20 | Shew_1319 | | DegT/DnrJ/EryC1/StrS aminotransferase (RefSeq) | low | > 60 |
Not shown: 7 genomes with orthologs for CSW01_19040 only; 72 genomes with orthologs for CSW01_01285 only