| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_08445 | | ABC transporter substrate-binding protein | 1.0 | CSW01_01280 | | GDP-mannose 4,6-dehydratase | 0.98 | 5 |
| Enterobacter asburiae PDN3 | 0.41 | EX28DRAFT_0974 | | ABC-type oligopeptide transport system, periplasmic component | 0.83 | EX28DRAFT_0502 | | GDP-mannose 4,6-dehydratase | low | > 76 |
| Rahnella sp. WP5 | 0.41 | EX31_RS15700 | | peptide ABC transporter substrate-binding protein SapA | 0.52 | EX31_RS02865 | | GDP-mannose 4,6-dehydratase | — | — |
| Enterobacter sp. TBS_079 | 0.40 | MPMX20_02474 | | Peptide transport periplasmic protein SapA | 0.82 | MPMX20_03035 | | GDP-mannose 4,6-dehydratase | low | > 85 |
| Pectobacterium carotovorum WPP14 | 0.40 | HER17_RS09495 | | peptide ABC transporter substrate-binding protein SapA | 0.78 | HER17_RS14540 | | GDP-mannose 4,6-dehydratase | low | > 75 |
| Pantoea sp. MT58 | 0.40 | IAI47_09380 | | peptide ABC transporter substrate-binding protein SapA | 0.11 | IAI47_18500 | | dTDP-glucose 4,6-dehydratase | — | — |
| Pantoea agglomerans CFBP13505 P0401 | 0.39 | PagCFBP13505_RS06770 | | peptide ABC transporter substrate-binding protein SapA | 0.46 | PagCFBP13505_RS01140 | | GDP-mannose 4,6-dehydratase | low | > 74 |
| Dickeya dianthicola 67-19 | 0.39 | HGI48_RS12505 | | peptide ABC transporter substrate-binding protein SapA | 0.87 | HGI48_RS18595 | | GDP-mannose 4,6-dehydratase | low | > 71 |
| Escherichia coli BW25113 | 0.39 | b1294 | sapA | predicted antimicrobial peptide transporter subunit (NCBI) | 0.83 | b2053 | gmd | GDP-D-mannose dehydratase, NAD(P)-binding (NCBI) | low | > 76 |
| Escherichia coli BL21 | 0.39 | ECD_01271 | | antimicrobial peptide transport ABC transporter periplasmic binding protein | 0.83 | ECD_01959 | | GDP-D-mannose dehydratase, NAD(P)-binding | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.39 | OHPLBJKB_02388 | | Peptide transport periplasmic protein SapA | 0.10 | OHPLBJKB_04266 | | dTDP-glucose 4,6-dehydratase 2 | low | > 74 |
| Escherichia coli ECRC62 | 0.39 | BNILDI_18295 | sapA | peptide ABC transporter substrate-binding protein SapA | 0.83 | BNILDI_14585 | | GDP-mannose 4,6-dehydratase | low | > 75 |
| Erwinia amylovora T8 | 0.39 | OLJFJH_13660 | | peptide ABC transporter substrate-binding protein SapA | 0.10 | OLJFJH_12090 | | dTDP-glucose 4 6-dehydratase | — | — |
| Escherichia fergusonii Becca | 0.39 | EFB2_02626 | | Peptide transport periplasmic protein SapA | 0.83 | EFB2_01801 | | GDP-mannose 4,6-dehydratase | low | > 86 |
| Dickeya dadantii 3937 | 0.39 | DDA3937_RS12440 | | peptide ABC transporter substrate-binding protein SapA | 0.87 | DDA3937_RS18665 | | GDP-mannose 4,6-dehydratase | low | > 74 |
| Escherichia coli ECOR38 | 0.39 | HEPCGN_25740 | sapA | peptide ABC transporter substrate-binding protein SapA | 0.83 | HEPCGN_03045 | | GDP-mannose 4,6-dehydratase | — | — |
| Escherichia coli Nissle 1917 | 0.39 | ECOLIN_RS07825 | | ABC transporter substrate-binding protein SapA | 0.82 | ECOLIN_RS12095 | | GDP-mannose 4,6-dehydratase | — | — |
| Dickeya dianthicola ME23 | 0.39 | DZA65_RS12955 | | peptide ABC transporter substrate-binding protein SapA | 0.87 | DZA65_RS19730 | | GDP-mannose 4,6-dehydratase | low | > 75 |
| Escherichia coli ECRC99 | 0.39 | KEDOAH_26315 | sapA | peptide ABC transporter substrate-binding protein SapA | 0.83 | KEDOAH_03710 | | GDP-mannose 4,6-dehydratase | — | — |
| Escherichia coli ECRC101 | 0.39 | MCAODC_15810 | sapA | peptide ABC transporter substrate-binding protein SapA | 0.83 | MCAODC_20500 | | GDP-mannose 4,6-dehydratase | — | — |
| Escherichia coli ECRC100 | 0.39 | OKFHMN_02460 | sapA | peptide ABC transporter substrate-binding protein SapA | 0.83 | OKFHMN_24440 | | GDP-mannose 4,6-dehydratase | — | — |
| Escherichia coli ECRC98 | 0.39 | JDDGAC_05005 | sapA | peptide ABC transporter substrate-binding protein SapA | 0.83 | JDDGAC_28550 | | GDP-mannose 4,6-dehydratase | — | — |
| Escherichia coli ECRC102 | 0.39 | NIAGMN_26630 | sapA | peptide ABC transporter substrate-binding protein SapA | 0.83 | NIAGMN_22385 | | GDP-mannose 4,6-dehydratase | — | — |
| Escherichia coli ECOR27 | 0.39 | NOLOHH_20145 | sapA | peptide ABC transporter substrate-binding protein SapA | 0.83 | NOLOHH_15675 | | GDP-mannose 4,6-dehydratase | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.38 | GFF2688 | | Peptide transport periplasmic protein SapA | 0.83 | GFF3875 | | GDP-mannose 4,6-dehydratase (EC 4.2.1.47) | low | > 78 |
| Pseudomonas syringae pv. syringae B728a | 0.32 | Psyr_4238 | | extracellular solute-binding protein, family 5 | 0.45 | Psyr_0916 | | GDP-mannose 4,6-dehydratase | low | > 86 |
| Pseudomonas sp. DMC3 | 0.32 | GFF5023 | | Periplasmic dipeptide transport protein | 0.40 | GFF545 | | GDP-mannose 4,6-dehydratase | low | > 89 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.32 | Psyr_4238 | | extracellular solute-binding protein, family 5 | 0.45 | Psyr_0916 | | GDP-mannose 4,6-dehydratase | low | > 86 |
| Pseudomonas sp. RS175 | 0.32 | PFR28_00128 | | Periplasmic dipeptide transport protein | 0.40 | PFR28_04554 | | GDP-mannose 4,6-dehydratase | low | > 88 |
| Pseudomonas segetis P6 | 0.32 | MPMX49_03884 | | Periplasmic dipeptide transport protein | 0.43 | MPMX49_00388 | | GDP-mannose 4,6-dehydratase | low | > 75 |
| Azospirillum brasilense Sp245 | 0.32 | AZOBR_RS29500 | | peptide ABC transporter substrate-binding protein | 0.44 | AZOBR_RS33465 | | GDP-mannose 4 6-dehydratase | low | > 97 |
| Azospirillum sp. SherDot2 | 0.32 | MPMX19_04419 | | Periplasmic dipeptide transport protein | 0.63 | MPMX19_06644 | | GDP-mannose 4,6-dehydratase | low | > 112 |
| Pseudomonas fluorescens FW300-N1B4 | 0.32 | Pf1N1B4_1121 | | Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2) | 0.39 | Pf1N1B4_1965 | | GDP-mannose 4,6-dehydratase (EC 4.2.1.47) | low | > 87 |
| Burkholderia phytofirmans PsJN | 0.31 | BPHYT_RS18690 | | ABC transporter | 0.69 | BPHYT_RS04000 | | GDP-mannose 4,6-dehydratase | low | > 109 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.31 | H281DRAFT_05802 | | dipeptide transport system substrate-binding protein | 0.69 | H281DRAFT_04776 | | GDPmannose 4,6-dehydratase | low | > 103 |
| Pseudomonas aeruginosa PA14 | 0.31 | IKLFDK_01580 | | Di/tripeptide-binding protein 3 | 0.39 | IKLFDK_26150 | | GDP-mannose 4 6-dehydratase | low | > 100 |
| Paraburkholderia sabiae LMG 24235 | 0.31 | QEN71_RS28705 | | ABC transporter substrate-binding protein | 0.70 | QEN71_RS26360 | | GDP-mannose 4,6-dehydratase | low | > 153 |
| Pseudomonas fluorescens GW456-L13 | 0.31 | PfGW456L13_5054 | | Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2) | 0.40 | PfGW456L13_2338 | | GDP-mannose 4,6-dehydratase (EC 4.2.1.47) | low | > 87 |
| Pseudomonas sp. S08-1 | 0.31 | OH686_08695 | | Dipeptide ABC transporter, substrate-binding protein DppA | 0.40 | OH686_11980 | | GDP-mannose 4,6-dehydratase | low | > 80 |
| Pseudomonas fluorescens FW300-N2C3 | 0.31 | AO356_07255 | | peptide ABC transporter substrate-binding protein | 0.40 | AO356_11835 | | GDP-mannose 4,6-dehydratase | low | > 104 |
| Pseudomonas sp. SVBP6 | 0.31 | COO64_RS04105 | | ABC transporter substrate-binding protein | 0.45 | COO64_RS06615 | gmd | GDP-mannose 4,6-dehydratase | low | > 93 |
| Pseudomonas fluorescens FW300-N2E2 | 0.31 | Pf6N2E2_3310 | | Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2) | 0.40 | Pf6N2E2_4242 | | GDP-mannose 4,6-dehydratase (EC 4.2.1.47) | low | > 103 |
| Pseudomonas fluorescens FW300-N2E3 | 0.30 | AO353_05370 | | peptide ABC transporter substrate-binding protein | 0.42 | AO353_10245 | | GDP-mannose 4,6-dehydratase | low | > 101 |
| Agrobacterium fabrum C58 | 0.30 | Atu4113 | | dipeptide ABC transporter substrate-binding protein | 0.59 | Atu4789 | | GDP-mannose 4,6-dehydratase | low | > 89 |
| Variovorax sp. SCN45 | 0.30 | GFF7288 | | Dipeptide ABC transporter, substrate-binding protein DppA (TC 3.A.1.5.2) | 0.74 | GFF61 | | GDP-mannose 4,6-dehydratase (EC 4.2.1.47) | low | > 127 |
| Paraburkholderia graminis OAS925 | 0.30 | ABIE53_000595 | | dipeptide transport system substrate-binding protein | 0.68 | ABIE53_000940 | | GDPmannose 4,6-dehydratase | low | > 113 |
| Pseudomonas putida KT2440 | 0.30 | PP_0885 | | dipeptide ABC transporter - periplasmic binding protein | 0.46 | PP_1799 | | GDP-mannose 4,6-dehydratase | low | > 96 |
| Variovorax sp. OAS795 | 0.30 | ABID97_RS04470 | | ABC transporter substrate-binding protein | 0.44 | ABID97_RS05705 | | GDP-mannose 4,6-dehydratase | low | > 91 |
| Pseudomonas fluorescens SBW25 | 0.30 | PFLU_RS04120 | | ABC transporter substrate-binding protein | 0.77 | PFLU_RS17890 | | GDP-mannose 4,6-dehydratase | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.30 | PFLU_RS04120 | | ABC transporter substrate-binding protein | 0.77 | PFLU_RS17890 | | GDP-mannose 4,6-dehydratase | low | > 109 |
| Pseudomonas lactucae CFBP13502 | 0.30 | GEMAOFIL_01020 | | Periplasmic dipeptide transport protein | 0.46 | GEMAOFIL_04278 | | GDP-mannose 4,6-dehydratase | low | > 93 |
| Rhodospirillum rubrum S1H | 0.30 | Rru_A2356 | | extracellular solute-binding protein, family 5 (NCBI) | 0.63 | Rru_A0253 | | GDP-mannose 4,6-dehydratase (NCBI) | low | > 58 |
| Castellaniella sp019104865 MT123 | 0.13 | ABCV34_RS13515 | | glutathione ABC transporter substrate-binding protein GsiB | 0.71 | ABCV34_RS12935 | | GDP-mannose 4,6-dehydratase | — | — |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.12 | ABZR88_RS16670 | | ABC transporter substrate-binding protein | 0.67 | ABZR88_RS18375 | | GDP-mannose 4,6-dehydratase | — | — |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.12 | CA265_RS01030 | | ABC transporter substrate-binding protein | 0.70 | CA265_RS19210 | | GDP-mannose 4,6-dehydratase | — | — |
| Bosea sp. OAE506 | 0.12 | ABIE41_RS23730 | | ABC transporter substrate-binding protein | 0.44 | ABIE41_RS02910 | | GDP-mannose 4,6-dehydratase | low | > 77 |
| Rhodopseudomonas palustris CGA009 | 0.11 | TX73_012035 | | ABC transporter substrate-binding protein | 0.45 | TX73_020470 | | GDP-mannose 4,6-dehydratase | low | > 86 |
| Synechocystis sp000284455 PCC 6803 | 0.11 | SGL_RS08095 | | peptide ABC transporter substrate-binding protein | 0.54 | SGL_RS01905 | | GDP-mannose 4,6-dehydratase | low | > 52 |
Not shown: 17 genomes with orthologs for CSW01_08445 only; 30 genomes with orthologs for CSW01_01280 only