Conservation of cofitness between CSW01_15330 and CSW01_01120 in Vibrio cholerae E7946 ATCC 55056

77 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_15330 glycine dehydrogenase (decarboxylating) 1.0 CSW01_01120 orotate phosphoribosyltransferase 0.78 3
Alteromonas macleodii MIT1002 0.63 MIT1002_02971 Glycine dehydrogenase [decarboxylating] 0.77 MIT1002_04070 Orotate phosphoribosyltransferase — —
Pseudomonas sp. S08-1 0.60 OH686_11165 glycine dehydrogenase 0.70 OH686_13590 Orotate phosphoribosyltransferase low > 80
Dechlorosoma suillum PS 0.60 Dsui_2737 glycine dehydrogenase, decarboxylating 0.57 Dsui_0873 orotate phosphoribosyltransferase — —
Pseudomonas stutzeri RCH2 0.60 Psest_0183 glycine dehydrogenase (decarboxylating) 0.71 Psest_3810 orotate phosphoribosyltransferase low > 67
Klebsiella pneumoniae MKP103 0.59 KDGMDA_04370 aminomethyl-transferring glycine dehydrogenase 0.84 KDGMDA_08050 Orotate phosphoribosyltransferase low > 95
Pseudomonas segetis P6 0.59 MPMX49_04479 Glycine dehydrogenase (decarboxylating) 0.68 MPMX49_00027 Orotate phosphoribosyltransferase — —
Enterobacter asburiae PDN3 0.59 EX28DRAFT_2955 glycine dehydrogenase (decarboxylating) 0.83 EX28DRAFT_3892 orotate phosphoribosyltransferase (EC 2.4.2.10) — —
Pantoea sp. MT58 0.59 IAI47_03775 aminomethyl-transferring glycine dehydrogenase 0.80 IAI47_00600 orotate phosphoribosyltransferase low > 76
Klebsiella michiganensis M5al 0.59 BWI76_RS23870 Glycine dehydrogenase (aminomethyl-transferring) (EC 1.4.4.2) (from data) 0.84 BWI76_RS27385 orotate phosphoribosyltransferase low > 92
Pantoea agglomerans CFBP13505 P0401 0.59 PagCFBP13505_RS15925 aminomethyl-transferring glycine dehydrogenase 0.80 PagCFBP13505_RS18745 orotate phosphoribosyltransferase low > 74
Pseudomonas fluorescens FW300-N1B4 0.59 Pf1N1B4_2236 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) 0.66 Pf1N1B4_2120 Orotate phosphoribosyltransferase (EC 2.4.2.10) — —
Kangiella aquimarina DSM 16071 0.59 B158DRAFT_0545 glycine dehydrogenase (decarboxylating) 0.67 B158DRAFT_0786 orotate phosphoribosyltransferase (EC 2.4.2.10) — —
Enterobacter sp. TBS_079 0.59 MPMX20_03762 Glycine dehydrogenase (decarboxylating) 0.83 MPMX20_00093 Orotate phosphoribosyltransferase low > 85
Pseudomonas sp. BP01 0.59 JOY50_RS22405 gcvP aminomethyl-transferring glycine dehydrogenase 0.68 JOY50_RS09035 pyrE orotate phosphoribosyltransferase low > 84
Escherichia coli ECOR27 0.59 NOLOHH_11445 gcvP aminomethyl-transferring glycine dehydrogenase 0.84 NOLOHH_07480 pyrE Orotate phosphoribosyltransferase low > 76
Escherichia coli Nissle 1917 0.59 ECOLIN_RS16165 aminomethyl-transferring glycine dehydrogenase 0.85 ECOLIN_RS20750 orotate phosphoribosyltransferase low > 55
Escherichia coli ECOR38 0.59 HEPCGN_18820 gcvP aminomethyl-transferring glycine dehydrogenase 0.84 HEPCGN_14420 pyrE Orotate phosphoribosyltransferase low > 88
Escherichia coli HS(pFamp)R (ATCC 700891) 0.59 OHPLBJKB_00812 Glycine dehydrogenase (decarboxylating) 0.85 OHPLBJKB_00060 Orotate phosphoribosyltransferase low > 74
Escherichia coli ECRC101 0.59 MCAODC_10050 gcvP aminomethyl-transferring glycine dehydrogenase 0.84 MCAODC_06110 pyrE Orotate phosphoribosyltransferase low > 87
Escherichia coli ECRC98 0.59 JDDGAC_23170 gcvP aminomethyl-transferring glycine dehydrogenase 0.84 JDDGAC_19225 pyrE Orotate phosphoribosyltransferase low > 87
Escherichia coli ECRC102 0.59 NIAGMN_17295 gcvP aminomethyl-transferring glycine dehydrogenase 0.84 NIAGMN_13360 pyrE Orotate phosphoribosyltransferase low > 80
Escherichia coli ECRC100 0.59 OKFHMN_19530 gcvP aminomethyl-transferring glycine dehydrogenase 0.84 OKFHMN_15600 pyrE Orotate phosphoribosyltransferase low > 79
Escherichia fergusonii Becca 0.59 EFB2_00999 Glycine dehydrogenase (decarboxylating) 0.84 EFB2_00171 Orotate phosphoribosyltransferase low > 86
Escherichia coli ECRC99 0.59 KEDOAH_08610 gcvP aminomethyl-transferring glycine dehydrogenase 0.84 KEDOAH_12550 pyrE Orotate phosphoribosyltransferase — —
Escherichia coli BW25113 0.59 b2903 gcvP glycine dehydrogenase (NCBI) 0.85 b3642 pyrE orotate phosphoribosyltransferase (NCBI) low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.59 GFF3003 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) 0.84 GFF367 Orotate phosphoribosyltransferase (EC 2.4.2.10) 0.49 56
Escherichia coli ECRC62 0.59 BNILDI_09980 gcvP aminomethyl-transferring glycine dehydrogenase 0.85 BNILDI_04035 pyrE Orotate phosphoribosyltransferase low > 75
Escherichia coli BL21 0.59 ECD_02735 glycine decarboxylase, PLP-dependent, subunit P of glycine cleavage complex 0.85 ECD_03499 orotate phosphoribosyltransferase 0.46 15
Erwinia amylovora T8 0.59 OLJFJH_08785 aminomethyl-transferring glycine dehydrogenase 0.81 OLJFJH_05770 orotate phosphoribosyltransferase low > 58
Shewanella loihica PV-4 0.59 Shew_3062 glycine dehydrogenase (RefSeq) 0.84 Shew_3487 pyrE orotate phosphoribosyltransferase (RefSeq) 0.59 21
Shewanella sp. ANA-3 0.58 Shewana3_3499 glycine dehydrogenase (RefSeq) 0.83 Shewana3_3776 pyrE orotate phosphoribosyltransferase (RefSeq) low > 73
Pseudomonas putida KT2440 0.58 PP_5192 glycine dehydrogenase 0.68 PP_5291 Orotate phosphoribosyltransferase — —
Shewanella oneidensis MR-1 0.58 SO0781 gcvP glycine cleavage system P protein (NCBI ptt file) 0.83 SO4255 pyrE orotate phosphoribosyltransferase (NCBI ptt file) low > 76
Pseudomonas sp. DMC3 0.58 GFF308 Glycine dehydrogenase (decarboxylating) 0.67 GFF411 Orotate phosphoribosyltransferase low > 89
Pseudomonas fluorescens GW456-L13 0.58 PfGW456L13_904 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) 0.67 PfGW456L13_788 Orotate phosphoribosyltransferase (EC 2.4.2.10) — —
Pseudomonas fluorescens FW300-N2E3 0.58 AO353_08720 glycine dehydrogenase 0.67 AO353_09245 orotate phosphoribosyltransferase — —
Pseudomonas sp. SVBP6 0.58 COO64_RS00950 gcvP aminomethyl-transferring glycine dehydrogenase 0.69 COO64_RS01495 pyrE orotate phosphoribosyltransferase low > 93
Serratia liquefaciens MT49 0.58 IAI46_20850 aminomethyl-transferring glycine dehydrogenase 0.81 IAI46_24845 orotate phosphoribosyltransferase low > 87
Dickeya dianthicola ME23 0.58 DZA65_RS03445 aminomethyl-transferring glycine dehydrogenase 0.81 DZA65_RS00735 orotate phosphoribosyltransferase low > 75
Dickeya dadantii 3937 0.58 DDA3937_RS03255 aminomethyl-transferring glycine dehydrogenase 0.83 DDA3937_RS20535 orotate phosphoribosyltransferase low > 74
Dickeya dianthicola 67-19 0.58 HGI48_RS03400 aminomethyl-transferring glycine dehydrogenase 0.81 HGI48_RS00680 orotate phosphoribosyltransferase low > 71
Shewanella amazonensis SB2B 0.58 Sama_2719 glycine dehydrogenase (RefSeq) 0.84 Sama_0321 pyrE orotate phosphoribosyltransferase (RefSeq) low > 62
Pectobacterium carotovorum WPP14 0.58 HER17_RS17995 aminomethyl-transferring glycine dehydrogenase 0.82 HER17_RS20850 orotate phosphoribosyltransferase low > 75
Erwinia tracheiphila SCR3 0.58 LU632_RS05915 gcvP aminomethyl-transferring glycine dehydrogenase 0.80 LU632_RS22015 pyrE orotate phosphoribosyltransferase low > 73
Rahnella sp. WP5 0.58 EX31_RS21520 aminomethyl-transferring glycine dehydrogenase 0.81 EX31_RS14500 orotate phosphoribosyltransferase low > 89
Erwinia tracheiphila HP pepo 2.2 0.58 IJEDHG_03250 gcvP aminomethyl-transferring glycine dehydrogenase 0.80 IJEDHG_07760 pyrE orotate phosphoribosyltransferase low > 61
Dyella japonica UNC79MFTsu3.2 0.57 ABZR86_RS08305 aminomethyl-transferring glycine dehydrogenase 0.58 ABZR86_RS15640 orotate phosphoribosyltransferase low > 74
Pseudomonas aeruginosa PA14 0.57 IKLFDK_27405 aminomethyl-transferring glycine dehydrogenase 0.69 IKLFDK_26800 Orotate phosphoribosyltransferase low > 98
Pseudomonas fluorescens SBW25 0.57 PFLU_RS24000 aminomethyl-transferring glycine dehydrogenase 0.67 PFLU_RS29475 orotate phosphoribosyltransferase — —
Pseudomonas fluorescens SBW25-INTG 0.57 PFLU_RS24000 aminomethyl-transferring glycine dehydrogenase 0.67 PFLU_RS29475 orotate phosphoribosyltransferase — —
Pseudomonas aeruginosa PUPa3 0.57 DQ20_RS50180 gcvP;go_function=glycine aminomethyl-transferring glycine dehydrogenase 0.69 DQ20_RS49580 pyrE;go_function=orotate orotate phosphoribosyltransferase low > 101
Pseudomonas aeruginosa MRSN321 0.57 DY961_RS11935 gcvP;go_function=glycine aminomethyl-transferring glycine dehydrogenase 0.69 DY961_RS12545 pyrE;go_function=orotate orotate phosphoribosyltransferase 0.44 72
Ralstonia solanacearum IBSBF1503 0.57 RALBFv3_RS08660 glycine dehydrogenase (aminomethyl-transferring) 0.51 RALBFv3_RS10075 orotate phosphoribosyltransferase — —
Ralstonia solanacearum UW163 0.57 UW163_RS04950 glycine dehydrogenase (aminomethyl-transferring) 0.51 UW163_RS03505 orotate phosphoribosyltransferase — —
Ralstonia solanacearum PSI07 0.57 RPSI07_RS08575 glycine dehydrogenase (aminomethyl-transferring) 0.50 RPSI07_RS23295 orotate phosphoribosyltransferase — —
Pseudomonas lactucae CFBP13502 0.57 GEMAOFIL_04608 Glycine dehydrogenase (decarboxylating) 0.67 GEMAOFIL_00027 Orotate phosphoribosyltransferase — —
Pseudomonas orientalis W4I3 0.57 QF045_RS24485 aminomethyl-transferring glycine dehydrogenase 0.67 QF045_RS02150 orotate phosphoribosyltransferase — —
Pseudomonas simiae WCS417 0.57 PS417_22360 Glycine dehydrogenase (aminomethyl-transferring) (EC 1.4.4.2) (from data) 0.67 PS417_27795 orotate phosphoribosyltransferase low > 88
Rhodanobacter denitrificans MT42 0.56 LRK55_RS00260 aminomethyl-transferring glycine dehydrogenase 0.56 LRK55_RS08720 orotate phosphoribosyltransferase low > 63
Ralstonia sp. UNC404CL21Col 0.56 ABZR87_RS03935 aminomethyl-transferring glycine dehydrogenase 0.51 ABZR87_RS05590 orotate phosphoribosyltransferase low > 80
Pseudomonas fluorescens FW300-N2C3 0.56 AO356_18170 glycine dehydrogenase 0.67 AO356_12520 orotate phosphoribosyltransferase low > 104
Pseudomonas sp. RS175 0.56 PFR28_03383 Glycine dehydrogenase (decarboxylating) 0.71 PFR28_04417 Orotate phosphoribosyltransferase — —
Pseudomonas fluorescens FW300-N2E2 0.56 Pf6N2E2_5558 Glycine dehydrogenase (aminomethyl-transferring) (EC 1.4.4.2) (from data) 0.68 Pf6N2E2_4370 Orotate phosphoribosyltransferase (EC 2.4.2.10) — —
Variovorax sp. SCN45 0.56 GFF6478 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) 0.50 GFF5065 Orotate phosphoribosyltransferase (EC 2.4.2.10) low > 127
Cupriavidus basilensis FW507-4G11 0.56 RR42_RS20070 glycine dehydrogenase 0.54 RR42_RS01225 orotate phosphoribosyltransferase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.56 Psyr_1096 glycine dehydrogenase (decarboxylating) alpha subunit / glycine dehydrogenase (decarboxylating) beta subunit 0.72 Psyr_0216 orotate phosphoribosyltransferase — —
Pseudomonas syringae pv. syringae B728a 0.56 Psyr_1096 glycine dehydrogenase (decarboxylating) alpha subunit / glycine dehydrogenase (decarboxylating) beta subunit 0.72 Psyr_0216 orotate phosphoribosyltransferase — —
Rhodanobacter denitrificans FW104-10B01 0.56 LRK54_RS00520 aminomethyl-transferring glycine dehydrogenase 0.56 LRK54_RS09190 orotate phosphoribosyltransferase — —
Ralstonia solanacearum GMI1000 0.56 RS_RS16510 glycine dehydrogenase 0.50 RS_RS00685 orotate phosphoribosyltransferase — —
Variovorax sp. OAS795 0.56 ABID97_RS19655 aminomethyl-transferring glycine dehydrogenase 0.50 ABID97_RS03910 orotate phosphoribosyltransferase low > 91
Xanthomonas campestris pv. campestris strain 8004 0.55 Xcc-8004.3878.1 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) 0.45 Xcc-8004.4884.1 Orotate phosphoribosyltransferase (EC 2.4.2.10) low > 74
Lysobacter sp. OAE881 0.55 ABIE51_RS14345 aminomethyl-transferring glycine dehydrogenase 0.44 ABIE51_RS00065 orotate phosphoribosyltransferase 0.71 20
Rhodanobacter sp. FW510-T8 0.55 OKGIIK_06740 gcvP2 Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain 0.56 OKGIIK_15685 pyrE orotate phosphoribosyltransferase — —
Castellaniella sp019104865 MT123 0.54 ABCV34_RS08835 aminomethyl-transferring glycine dehydrogenase 0.56 ABCV34_RS10890 orotate phosphoribosyltransferase — —
Rhodanobacter sp000427505 FW510-R12 0.54 LRK53_RS09610 aminomethyl-transferring glycine dehydrogenase 0.57 LRK53_RS17885 orotate phosphoribosyltransferase low > 59
Hydrogenophaga sp. GW460-11-11-14-LB1 0.54 GFF5215 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) 0.50 GFF1882 Orotate phosphoribosyltransferase (EC 2.4.2.10) low > 90
Acidovorax sp. GW101-3H11 0.54 Ac3H11_167 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) 0.52 Ac3H11_3341 Orotate phosphoribosyltransferase (EC 2.4.2.10) low > 79

Not shown: 24 genomes with orthologs for CSW01_15330 only; 6 genomes with orthologs for CSW01_01120 only