Conservation of cofitness between CSW01_13680 and CSW01_00850 in Vibrio cholerae E7946 ATCC 55056

89 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_13680 DNA helicase RecG 1.0 CSW01_00850 multidrug resistance protein 0.71 14
Pantoea agglomerans CFBP13505 P0401 0.70 PagCFBP13505_RS18845 ATP-dependent DNA helicase RecG 0.23 PagCFBP13505_RS19855 multidrug efflux RND transporter permease AcrD low > 74
Pantoea sp. MT58 0.70 IAI47_00500 ATP-dependent DNA helicase RecG 0.23 IAI47_05310 multidrug efflux RND transporter permease AcrD low > 76
Serratia liquefaciens MT49 0.69 IAI46_24905 ATP-dependent DNA helicase RecG 0.23 IAI46_18690 multidrug efflux RND transporter permease AcrD low > 86
Klebsiella pneumoniae MKP103 0.69 KDGMDA_08135 ATP-dependent DNA helicase RecG 0.24 KDGMDA_14835 acriflavine resistance protein B low > 95
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.69 GFF355 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.24 GFF4246 RND efflux system, inner membrane transporter CmeB low > 78
Erwinia amylovora T8 0.69 OLJFJH_05550 ATP-dependent DNA helicase RecG 0.22 OLJFJH_17855 multidrug efflux RND transporter permease subunit AcrB low > 58
Dickeya dadantii 3937 0.69 DDA3937_RS00170 ATP-dependent DNA helicase RecG 0.23 DDA3937_RS05735 multidrug efflux RND transporter permease subunit low > 74
Escherichia coli ECRC99 0.69 KEDOAH_12600 recG ATP-dependent DNA helicase RecG 0.24 KEDOAH_06250 acrD multidrug efflux RND transporter permease AcrD — —
Escherichia coli ECRC102 0.69 NIAGMN_13305 recG ATP-dependent DNA helicase RecG 0.24 NIAGMN_19740 acrD multidrug efflux RND transporter permease AcrD low > 80
Escherichia coli ECRC100 0.69 OKFHMN_15545 recG ATP-dependent DNA helicase RecG 0.24 OKFHMN_21970 acrD multidrug efflux RND transporter permease AcrD low > 79
Escherichia coli ECRC98 0.69 JDDGAC_19170 recG ATP-dependent DNA helicase RecG 0.24 JDDGAC_25915 acrD multidrug efflux RND transporter permease AcrD low > 87
Escherichia coli ECRC101 0.69 MCAODC_06055 recG ATP-dependent DNA helicase RecG 0.24 MCAODC_12500 acrD multidrug efflux RND transporter permease AcrD low > 88
Escherichia coli ECOR27 0.68 NOLOHH_07425 recG ATP-dependent DNA helicase RecG 0.24 NOLOHH_13650 acrD multidrug efflux RND transporter permease AcrD low > 76
Escherichia coli ECOR38 0.68 HEPCGN_14365 recG ATP-dependent DNA helicase RecG 0.24 HEPCGN_21140 acrD multidrug efflux RND transporter permease AcrD low > 88
Escherichia fergusonii Becca 0.68 EFB2_00136 ATP-dependent DNA helicase RecG 0.24 EFB2_01418 Multidrug efflux pump subunit AcrB low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.68 OHPLBJKB_00049 ATP-dependent DNA helicase RecG 0.24 OHPLBJKB_01261 Multidrug efflux pump subunit AcrB low > 74
Escherichia coli ECRC62 0.68 BNILDI_04090 recG ATP-dependent DNA helicase RecG 0.24 BNILDI_12460 acrD multidrug efflux RND transporter permease AcrD low > 75
Escherichia coli BL21 0.68 ECD_03509 ATP-dependent DNA helicase 0.24 ECD_02361 aminoglycoside/multidrug efflux system low > 61
Escherichia coli BW25113 0.68 b3652 recG ATP-dependent DNA helicase (NCBI) 0.24 b2470 acrD aminoglycoside/multidrug efflux system (NCBI) low > 76
Escherichia coli Nissle 1917 0.68 ECOLIN_RS20800 ATP-dependent DNA helicase RecG 0.24 ECOLIN_RS14090 multidrug efflux RND transporter permease AcrD low > 55
Klebsiella michiganensis M5al 0.68 BWI76_RS27440 DNA helicase RecG 0.24 BWI76_RS06775 multidrug efflux RND transporter permease subunit low > 92
Enterobacter sp. TBS_079 0.68 MPMX20_00084 ATP-dependent DNA helicase RecG 0.24 MPMX20_01064 Multidrug efflux pump subunit AcrB low > 85
Dickeya dianthicola ME23 0.68 DZA65_RS22160 ATP-dependent DNA helicase RecG 0.22 DZA65_RS06115 multidrug efflux RND transporter permease subunit low > 75
Pectobacterium carotovorum WPP14 0.68 HER17_RS21395 ATP-dependent DNA helicase RecG 0.23 HER17_RS01560 multidrug efflux RND transporter permease AcrD low > 75
Dickeya dianthicola 67-19 0.68 HGI48_RS21190 ATP-dependent DNA helicase RecG 0.22 HGI48_RS05790 multidrug efflux RND transporter permease subunit low > 71
Enterobacter asburiae PDN3 0.67 EX28DRAFT_3901 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.24 EX28DRAFT_2496 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family low > 76
Erwinia tracheiphila HP pepo 2.2 0.67 IJEDHG_08345 recG ATP-dependent DNA helicase RecG 0.21 IJEDHG_16580 adeB hydrophobe/amphiphile efflux-1 family RND transporter — —
Erwinia tracheiphila SCR3 0.67 LU632_RS22190 recG ATP-dependent DNA helicase RecG 0.22 LU632_RS18185 efflux RND transporter permease subunit — —
Rahnella sp. WP5 0.67 EX31_RS15820 ATP-dependent DNA helicase RecG 0.23 EX31_RS22470 multidrug efflux RND transporter permease subunit low > 89
Shewanella amazonensis SB2B 0.65 Sama_3375 ATP-dependent DNA helicase RecG (RefSeq) 0.71 Sama_3269 putative multidrug resistance protein (RefSeq) low > 62
Shewanella sp. ANA-3 0.65 Shewana3_0348 ATP-dependent DNA helicase RecG (RefSeq) 0.72 Shewana3_0371 acriflavin resistance protein (RefSeq) low > 73
Pseudomonas segetis P6 0.57 MPMX49_00040 ATP-dependent DNA helicase RecG 0.48 MPMX49_03771 Multidrug efflux pump subunit AcrB low > 75
Pseudomonas stutzeri RCH2 0.57 Psest_4192 ATP-dependent DNA helicase RecG 0.45 Psest_1153 Cation/multidrug efflux pump — —
Pseudomonas sp. BP01 0.56 JOY50_RS08945 recG ATP-dependent DNA helicase RecG 0.47 JOY50_RS14955 multidrug efflux RND transporter permease subunit low > 84
Pseudomonas sp. S08-1 0.56 OH686_13505 ATP-dependent DNA helicase RecG 0.47 OH686_17360 Multidrug efflux system, inner membrane proton/drug antiporter (RND type) low > 80
Pseudomonas putida KT2440 0.56 PP_5310 junction-specific ATP-dependent DNA helicase 0.46 PP_0906 putative Multidrug efflux RND transporter low > 96
Pseudomonas aeruginosa PA14 0.55 IKLFDK_26730 ATP-dependent DNA helicase RecG 0.46 IKLFDK_02225 multidrug efflux RND transporter permease subunit MexW low > 100
Pseudomonas fluorescens FW300-N1B4 0.55 Pf1N1B4_2105 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.47 Pf1N1B4_720 RND multidrug efflux transporter; Acriflavin resistance protein low > 87
Pseudomonas fluorescens GW456-L13 0.55 PfGW456L13_772 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.45 PfGW456L13_1771 RND multidrug efflux transporter; Acriflavin resistance protein low > 87
Pseudomonas sp. RS175 0.55 PFR28_04435 ATP-dependent DNA helicase RecG 0.47 PFR28_03330 Multidrug efflux pump subunit AcrB low > 88
Pseudomonas sp. DMC3 0.55 GFF427 ATP-dependent DNA helicase RecG 0.46 GFF5069 Multidrug efflux pump subunit AcrB low > 89
Pseudomonas fluorescens FW300-N2E2 0.55 Pf6N2E2_4352 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.47 Pf6N2E2_5614 RND multidrug efflux transporter; Acriflavin resistance protein low > 103
Pseudomonas fluorescens SBW25 0.55 PFLU_RS29550 ATP-dependent DNA helicase RecG 0.47 PFLU_RS24405 multidrug efflux RND transporter permease subunit low > 109
Marinobacter adhaerens HP15 0.55 HP15_309 DNA helicase, ATP-dependent, RecG 0.46 HP15_3262 multidrug resistance protein low > 73
Pseudomonas lactucae CFBP13502 0.55 GEMAOFIL_00042 ATP-dependent DNA helicase RecG 0.23 GEMAOFIL_03223 multidrug efflux RND transporter permease subunit OqxB9 low > 93
Pseudomonas simiae WCS417 0.55 PS417_27870 ATP-dependent DNA helicase RecG 0.47 PS417_22755 acriflavine resistance protein B low > 88
Pseudomonas fluorescens SBW25-INTG 0.55 PFLU_RS29550 ATP-dependent DNA helicase RecG 0.47 PFLU_RS24405 multidrug efflux RND transporter permease subunit low > 109
Pseudomonas fluorescens FW300-N2C3 0.55 AO356_12380 ATP-dependent DNA helicase RecG 0.47 AO356_18440 acriflavine resistance protein B 0.31 70
Pseudomonas fluorescens FW300-N2E3 0.55 AO353_09320 ATP-dependent DNA helicase RecG 0.46 AO353_04000 acriflavine resistance protein B low > 101
Pseudomonas syringae pv. syringae B728a 0.55 Psyr_0201 ATP-dependent DNA helicase RecG 0.23 Psyr_2968 Hydrophobe/amphiphile efflux-1 HAE1 0.38 32
Pseudomonas syringae pv. syringae B728a ΔmexB 0.55 Psyr_0201 ATP-dependent DNA helicase RecG 0.23 Psyr_2968 Hydrophobe/amphiphile efflux-1 HAE1 0.60 1
Pseudomonas sp. SVBP6 0.55 COO64_RS01595 recG ATP-dependent DNA helicase RecG 0.46 COO64_RS12055 multidrug efflux RND transporter permease subunit low > 93
Acinetobacter radioresistens SK82 0.52 MPMX26_02732 ATP-dependent DNA helicase RecG 0.24 MPMX26_00689 Multidrug resistance protein MexB 0.68 32
Rhodanobacter sp000427505 FW510-R12 0.52 LRK53_RS16735 ATP-dependent DNA helicase RecG 0.22 LRK53_RS07935 multidrug efflux RND transporter permease subunit low > 59
Acinetobacter baumannii LAC-4 0.52 RR41_RS02075 ATP-dependent DNA helicase RecG 0.25 RR41_RS03865 multidrug efflux RND transporter permease subunit AdeJ — —
Rhodanobacter denitrificans MT42 0.51 LRK55_RS11530 ATP-dependent DNA helicase RecG 0.23 LRK55_RS11630 efflux RND transporter permease subunit low > 63
Dyella japonica UNC79MFTsu3.2 0.51 ABZR86_RS11840 ATP-dependent DNA helicase RecG 0.23 ABZR86_RS11745 efflux RND transporter permease subunit low > 74
Rhodanobacter denitrificans FW104-10B01 0.50 LRK54_RS11805 ATP-dependent DNA helicase RecG 0.23 LRK54_RS11905 efflux RND transporter permease subunit low > 59
Rhodanobacter sp. FW510-T8 0.50 OKGIIK_12090 recG ATP-dependent DNA helicase RecG 0.23 OKGIIK_11990 acrB acriflavine resistance protein B low > 53
Kangiella aquimarina DSM 16071 0.49 B158DRAFT_0566 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.23 B158DRAFT_0733 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family low > 40
Cupriavidus basilensis FW507-4G11 0.45 RR42_RS17390 ATP-dependent DNA helicase RecG 0.22 RR42_RS32420 multidrug efflux RND transporter permease subunit low > 128
Methylophilus sp. DMC18 0.45 GFF2125 ATP-dependent DNA helicase RecG 0.24 GFF1649 Efflux pump membrane transporter BepE low > 43
Ralstonia solanacearum IBSBF1503 0.45 RALBFv3_RS05675 DNA helicase RecG 0.22 RALBFv3_RS09445 multidrug efflux RND transporter permease subunit 0.59 6
Ralstonia solanacearum UW163 0.45 UW163_RS07950 DNA helicase RecG 0.22 UW163_RS04135 multidrug efflux RND transporter permease subunit — —
Ralstonia sp. UNC404CL21Col 0.45 ABZR87_RS01270 ATP-dependent DNA helicase RecG 0.22 ABZR87_RS09795 efflux RND transporter permease subunit low > 80
Ralstonia solanacearum PSI07 0.45 RPSI07_RS11625 DNA helicase RecG 0.22 RPSI07_RS23905 hydrophobe/amphiphile efflux-1 family RND transporter low > 81
Ralstonia solanacearum GMI1000 0.45 RS_RS13565 DNA helicase RecG 0.22 RS_RS00045 multidrug efflux RND transporter permease subunit — —
Paraburkholderia graminis OAS925 0.44 ABIE53_000833 ATP-dependent DNA helicase RecG 0.24 ABIE53_005788 multidrug efflux pump low > 113
Burkholderia phytofirmans PsJN 0.44 BPHYT_RS03400 ATP-dependent DNA helicase RecG 0.43 BPHYT_RS29560 acriflavine resistance protein B low > 109
Herbaspirillum seropedicae SmR1 0.44 HSERO_RS06165 ATP-dependent DNA helicase RecG 0.23 HSERO_RS23055 multidrug transporter low > 78
Paraburkholderia bryophila 376MFSha3.1 0.44 H281DRAFT_04672 ATP-dependent DNA helicase RecG 0.23 H281DRAFT_04170 multidrug efflux pump low > 103
Paraburkholderia sabiae LMG 24235 0.44 QEN71_RS26630 ATP-dependent DNA helicase RecG 0.43 QEN71_RS26025 efflux RND transporter permease subunit — —
Acidovorax sp. GW101-3H11 0.44 Ac3H11_781 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.34 Ac3H11_482 RND multidrug efflux transporter; Acriflavin resistance protein low > 79
Dechlorosoma suillum PS 0.42 Dsui_0311 ATP-dependent DNA helicase RecG 0.35 Dsui_1555 cation/multidrug efflux pump low > 51
Castellaniella sp019104865 MT123 0.41 ABCV34_RS03570 ATP-dependent DNA helicase RecG 0.20 ABCV34_RS14620 multidrug efflux RND transporter permease subunit low > 48
Variovorax sp. OAS795 0.41 ABID97_RS01575 ATP-dependent DNA helicase RecG 0.22 ABID97_RS17350 efflux RND transporter permease subunit low > 91
Hydrogenophaga sp. GW460-11-11-14-LB1 0.40 GFF2802 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.34 GFF4261 RND multidrug efflux transporter; Acriflavin resistance protein low > 90
Variovorax sp. SCN45 0.38 GFF5538 ATP-dependent DNA helicase RecG (EC 3.6.4.12) 0.45 GFF3509 Multidrug efflux system, inner membrane proton/drug antiporter (RND type) => MexI of MexHI-OpmD system low > 127
Synechococcus elongatus PCC 7942 0.35 Synpcc7942_1079 recG ATP-dependent DNA helicase RecG 0.24 Synpcc7942_2369 acrF Hydrophobe/amphiphile efflux-1 HAE1 — —
Azospirillum sp. SherDot2 0.34 MPMX19_00951 ATP-dependent DNA helicase RecG 0.48 MPMX19_05610 Efflux pump membrane transporter BepE — —
Magnetospirillum magneticum AMB-1 0.34 AMB_RS12400 ATP-dependent DNA helicase RecG 0.48 AMB_RS17260 acriflavine resistance protein B — —
Azospirillum brasilense Sp245 0.33 AZOBR_RS09850 ATP-dependent DNA helicase RecG 0.49 AZOBR_RS31320 acriflavine resistance protein B low > 97
Caulobacter crescentus NA1000 0.33 CCNA_01504 ATP-dependent DNA helicase recG 0.23 CCNA_00850 cation/multidrug efflux pump acrB2 low > 66
Caulobacter crescentus NA1000 Δfur 0.33 CCNA_01504 ATP-dependent DNA helicase recG 0.23 CCNA_00850 cation/multidrug efflux pump acrB2 low > 67
Cellulophaga baltica 18 0.32 M666_RS15340 ATP-dependent DNA helicase RecG 0.23 M666_RS00650 efflux RND transporter permease subunit low > 67
Bosea sp. OAE506 0.31 ABIE41_RS15815 ATP-dependent DNA helicase RecG 0.23 ABIE41_RS01595 efflux RND transporter permease subunit low > 77
Rhodospirillum rubrum S1H 0.29 Rru_A1728 ATP-dependent DNA helicase RecG (NCBI) 0.49 Rru_A3699 Acriflavin resistance protein (NCBI) — —
Xanthobacter sp. DMC5 0.29 GFF630 ATP-dependent DNA helicase RecG 0.40 GFF2738 Efflux pump membrane transporter BepE — —
Rhodopseudomonas palustris CGA009 0.29 TX73_013795 ATP-dependent DNA helicase RecG 0.48 TX73_019545 MexW/MexI family multidrug efflux RND transporter permease subunit low > 86

Not shown: 24 genomes with orthologs for CSW01_13680 only; 2 genomes with orthologs for CSW01_00850 only