Conservation of cofitness between CSW01_12905 and CSW01_00790 in Vibrio cholerae E7946 ATCC 55056

68 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_12905 outer membrane protein assembly factor 1.0 CSW01_00790 vitamin B12 transporter BtuB 0.46 7
Pectobacterium carotovorum WPP14 0.38 HER17_RS03980 autotransporter assembly complex protein TamA 0.29 HER17_RS00980 TonB-dependent vitamin B12 receptor BtuB low > 75
Serratia liquefaciens MT49 0.38 IAI46_01770 outer membrane protein assembly factor 0.30 IAI46_24450 TonB-dependent vitamin B12 receptor BtuB low > 87
Enterobacter asburiae PDN3 0.37 EX28DRAFT_3406 Outer membrane protein 0.30 EX28DRAFT_4429 TonB-dependent vitamin B12 receptor low > 76
Rahnella sp. WP5 0.37 EX31_RS08695 outer membrane protein assembly factor 0.29 EX31_RS14135 TonB-dependent vitamin B12 receptor BtuB 0.75 74
Klebsiella pneumoniae MKP103 0.37 KDGMDA_11250 autotransporter assembly complex protein TamA 0.29 KDGMDA_09405 TonB-dependent vitamin B12 receptor BtuB low > 95
Dickeya dadantii 3937 0.37 DDA3937_RS17160 outer membrane protein assembly factor 0.32 DDA3937_RS00995 TonB-dependent vitamin B12 receptor BtuB low > 74
Enterobacter sp. TBS_079 0.37 MPMX20_00503 Translocation and assembly module subunit TamA 0.28 MPMX20_04514 Vitamin B12 transporter BtuB low > 85
Pantoea sp. MT58 0.37 IAI47_02715 outer membrane protein assembly factor 0.29 IAI47_00955 TonB-dependent vitamin B12 receptor BtuB low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.37 GFF874 Uncharacterized protein YtfM precursor 0.31 GFF2352 Outer membrane vitamin B12 receptor BtuB low > 78
Pantoea agglomerans CFBP13505 P0401 0.36 PagCFBP13505_RS11310 outer membrane protein assembly factor 0.31 PagCFBP13505_RS18385 TonB-dependent vitamin B12 receptor BtuB low > 74
Escherichia coli ECRC98 0.36 JDDGAC_15640 tamA autotransporter assembly complex protein TamA 0.30 JDDGAC_17155 btuB TonB-dependent vitamin B12 receptor BtuB low > 87
Escherichia coli ECRC99 0.36 KEDOAH_16155 tamA autotransporter assembly complex protein TamA 0.30 KEDOAH_14630 btuB TonB-dependent vitamin B12 receptor BtuB — —
Escherichia coli ECRC101 0.36 MCAODC_02515 tamA autotransporter assembly complex protein TamA 0.30 MCAODC_04030 btuB TonB-dependent vitamin B12 receptor BtuB low > 87
Escherichia coli ECRC62 0.36 BNILDI_07255 tamA autotransporter assembly complex protein TamA 0.30 BNILDI_05850 btuB TonB-dependent vitamin B12 receptor BtuB low > 75
Escherichia coli ECRC100 0.36 OKFHMN_12000 tamA autotransporter assembly complex protein TamA 0.30 OKFHMN_13530 btuB TonB-dependent vitamin B12 receptor BtuB low > 79
Escherichia coli ECOR27 0.36 NOLOHH_04260 tamA autotransporter assembly complex protein TamA 0.30 NOLOHH_05675 btuB TonB-dependent vitamin B12 receptor BtuB low > 76
Dickeya dianthicola 67-19 0.36 HGI48_RS17215 outer membrane protein assembly factor 0.28 HGI48_RS20380 TonB-dependent vitamin B12 receptor BtuB low > 71
Escherichia coli HS(pFamp)R (ATCC 700891) 0.36 OHPLBJKB_03813 Translocation and assembly module subunit TamA 0.30 OHPLBJKB_04084 Vitamin B12 transporter BtuB low > 74
Escherichia coli BW25113 0.36 b4220 ytfM predicted outer membrane protein and surface antigen (NCBI) 0.30 b3966 btuB vitamin B12/cobalamin outer membrane transporter (NCBI) low > 76
Escherichia coli ECRC102 0.36 NIAGMN_09850 tamA autotransporter assembly complex protein TamA 0.30 NIAGMN_11280 btuB TonB-dependent vitamin B12 receptor BtuB low > 80
Klebsiella michiganensis M5al 0.36 BWI76_RS02775 outer membrane protein assembly factor 0.29 BWI76_RS00890 vitamin B12/cobalamin outer membrane transporter low > 92
Escherichia coli ECOR38 0.36 HEPCGN_10200 tamA autotransporter assembly complex protein TamA 0.30 HEPCGN_12185 btuB TonB-dependent vitamin B12 receptor BtuB low > 88
Escherichia fergusonii Becca 0.36 EFB2_04309 Translocation and assembly module subunit TamA 0.28 EFB2_04644 Vitamin B12 transporter BtuB low > 86
Escherichia coli Nissle 1917 0.36 ECOLIN_RS24510 autotransporter assembly complex protein TamA 0.31 ECOLIN_RS22905 TonB-dependent vitamin B12 receptor BtuB low > 55
Dickeya dianthicola ME23 0.36 DZA65_RS18295 outer membrane protein assembly factor 0.30 DZA65_RS21425 TonB-dependent vitamin B12 receptor BtuB low > 75
Pseudomonas aeruginosa PA14 0.30 IKLFDK_12500 Translocation and assembly module subunit TamA 0.19 IKLFDK_06025 TonB-dependent vitamin B12 receptor low > 98
Pseudomonas aeruginosa MRSN321 0.30 DY961_RS04915 autotransporter assembly complex family protein 0.20 DY961_RS06055 btuB;go_component=outer TonB-dependent vitamin B12 receptor low > 100
Pseudomonas aeruginosa PUPa3 0.29 DQ20_RS35815 autotransporter assembly complex family protein 0.19 DQ20_RS46725 btuB;go_component=outer TonB-dependent vitamin B12 receptor low > 101
Pseudomonas putida KT2440 0.28 PP_2892 conserved exported protein of unknown function 0.15 PP_0525 TonB-dependent receptor, B12 family low > 96
Pseudomonas sp. BP01 0.27 JOY50_RS05880 autotransporter assembly complex family protein 0.14 JOY50_RS20070 TonB-dependent receptor domain-containing protein low > 84
Pseudomonas lactucae CFBP13502 0.27 GEMAOFIL_03702 Translocation and assembly module subunit TamA 0.16 GEMAOFIL_05148 Vitamin B12 transporter BtuB low > 96
Pseudomonas sp. DMC3 0.27 GFF1483 Translocation and assembly module subunit TamA 0.16 GFF3838 Vitamin B12 transporter BtuB low > 89
Pseudomonas fluorescens GW456-L13 0.27 PfGW456L13_2601 Uncharacterized protein YtfM precursor 0.16 PfGW456L13_1324 Outer membrane vitamin B12 receptor BtuB low > 87
Pseudomonas fluorescens FW300-N1B4 0.27 Pf1N1B4_3997 Uncharacterized protein YtfM precursor 0.15 Pf1N1B4_2660 Outer membrane vitamin B12 receptor BtuB low > 87
Pseudomonas segetis P6 0.27 ACVTMO_RS11845 autotransporter assembly complex protein TamA 0.20 ACVTMO_RS09005 btuB TonB-dependent vitamin B12 receptor low > 75
Pseudomonas simiae WCS417 0.27 PS417_16970 membrane protein 0.16 PS417_25210 TonB-dependent receptor low > 88
Pseudomonas sp. SVBP6 0.27 COO64_RS24395 autotransporter assembly complex family protein 0.16 COO64_RS15835 TonB-dependent receptor domain-containing protein low > 93
Pseudomonas stutzeri RCH2 0.27 Psest_2132 Outer membrane protein 0.20 Psest_3016 TonB-dependent vitamin B12 receptor low > 67
Pseudomonas fluorescens SBW25-INTG 0.27 PFLU_RS18920 outer membrane protein assembly factor 0.15 PFLU_RS26850 TonB-dependent receptor low > 109
Pseudomonas fluorescens SBW25 0.27 PFLU_RS18920 outer membrane protein assembly factor 0.15 PFLU_RS26850 TonB-dependent receptor low > 109
Pseudomonas sp. RS175 0.27 PFR28_02752 Translocation and assembly module subunit TamA 0.15 PFR28_03938 Vitamin B12 transporter BtuB low > 88
Pseudomonas orientalis W4I3 0.26 QF045_RS18645 autotransporter assembly complex family protein 0.15 QF045_RS27180 TonB-dependent receptor low > 93
Pseudomonas fluorescens FW300-N2E2 0.26 Pf6N2E2_144 Uncharacterized protein YtfM precursor 0.15 Pf6N2E2_4930 Outer membrane vitamin B12 receptor BtuB low > 103
Marinobacter adhaerens HP15 0.26 HP15_2341 surface antigen (D15) 0.15 HP15_3953 outer membrane receptor for transport of vitamin B low > 73
Pseudomonas fluorescens FW300-N2C3 0.26 AO356_01050 hypothetical protein 0.14 AO356_14985 TonB-dependent receptor low > 104
Pseudomonas fluorescens FW300-N2E3 0.26 AO353_27865 hypothetical protein 0.15 AO353_06660 TonB-dependent receptor low > 101
Alteromonas macleodii MIT1002 0.24 MIT1002_04048 Autotransporter assembly factor TamA 0.13 MIT1002_00716 Outer membrane cobalamin translocator low > 70
Xanthomonas campestris pv. campestris strain 8004 0.20 Xcc-8004.5193.1 Outer membrane protein assembly factor YaeT precursor 0.19 Xcc-8004.1388.1 Outer membrane vitamin B12 receptor BtuB low > 74
Rhodanobacter denitrificans MT42 0.18 LRK55_RS12405 autotransporter assembly complex family protein 0.17 LRK55_RS07560 TonB-dependent vitamin B12 receptor low > 63
Rhodanobacter denitrificans FW104-10B01 0.18 LRK54_RS12665 autotransporter assembly complex protein TamA 0.17 LRK54_RS07830 TonB-dependent vitamin B12 receptor low > 59
Rhodanobacter sp000427505 FW510-R12 0.17 LRK53_RS15900 autotransporter assembly complex protein TamA 0.18 LRK53_RS00695 TonB-dependent vitamin B12 receptor low > 59
Lysobacter sp. OAE881 0.16 ABIE51_RS01235 autotransporter assembly complex family protein 0.21 ABIE51_RS04930 TonB-dependent vitamin B12 receptor low > 62
Dyella japonica UNC79MFTsu3.2 0.16 ABZR86_RS19705 autotransporter assembly complex family protein 0.20 ABZR86_RS10930 TonB-dependent vitamin B12 receptor low > 74
Cupriavidus basilensis FW507-4G11 0.14 RR42_RS16040 membrane protein 0.14 RR42_RS16140 TonB-dependent receptor low > 128
Variovorax sp. SCN45 0.12 GFF2183 Outer membrane component of TAM transport system 0.17 GFF450 Outer membrane vitamin B12 receptor BtuB low > 127
Ralstonia solanacearum PSI07 0.11 RPSI07_RS12950 outer membrane protein assembly factor 0.15 RPSI07_RS12875 TonB-dependent receptor low > 81
Paraburkholderia bryophila 376MFSha3.1 0.11 H281DRAFT_00153 autotransporter secretion outer membrane protein TamA 0.16 H281DRAFT_00136 vitamin B12 transporter low > 103
Hydrogenophaga sp. GW460-11-11-14-LB1 0.11 GFF671 Surface antigen (D15) precursor 0.17 GFF3976 Outer membrane vitamin B12 receptor BtuB — —
Ralstonia solanacearum IBSBF1503 0.11 RALBFv3_RS04420 outer membrane protein assembly factor 0.15 RALBFv3_RS04495 TonB-dependent receptor low > 76
Ralstonia solanacearum UW163 0.11 UW163_RS09250 outer membrane protein assembly factor 0.15 UW163_RS09175 TonB-dependent receptor — —
Ralstonia solanacearum GMI1000 0.11 RS_RS11970 outer membrane protein assembly factor 0.15 RS_RS12050 TonB-dependent receptor low > 80
Variovorax sp. OAS795 0.10 ABID97_RS24415 BamA/TamA family outer membrane protein 0.17 ABID97_RS17425 TonB-dependent receptor low > 91
Acidovorax sp. GW101-3H11 0.10 Ac3H11_3933 Surface antigen (D15) precursor 0.17 Ac3H11_985 Outer membrane vitamin B12 receptor BtuB low > 79
Rhodospirillum rubrum S1H 0.07 Rru_A2099 surface antigen (NCBI) 0.11 Rru_A0488 TonB-dependent receptor (NCBI) low > 58
Caulobacter crescentus NA1000 Δfur 0.07 CCNA_01675 outer membrane protein 0.11 CCNA_01826 vitamin B12 receptor low > 67
Caulobacter crescentus NA1000 0.07 CCNA_01675 outer membrane protein 0.11 CCNA_01826 vitamin B12 receptor — —
Castellaniella sp019104865 MT123 0.07 ABCV34_RS08915 BamA/TamA family outer membrane protein 0.14 ABCV34_RS14545 TonB-dependent receptor low > 48
Brevundimonas sp. GW460-12-10-14-LB2 0.06 A4249_RS02875 autotransporter assembly complex family protein 0.11 A4249_RS12105 TonB-dependent receptor 0.85 18

Not shown: 11 genomes with orthologs for CSW01_12905 only; 14 genomes with orthologs for CSW01_00790 only