Conservation of cofitness between CSW01_00065 and CSW01_00170 in Vibrio cholerae E7946 ATCC 55056

59 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_00065 DNA replication and repair protein RecF 1.0 CSW01_00170 thiol:disulfide interchange protein DsbA 0.64 18
Erwinia amylovora T8 0.57 OLJFJH_05150 DNA replication/repair protein RecF 0.35 OLJFJH_05465 thiol:disulfide interchange protein DsbA low > 58
Pantoea sp. MT58 0.56 IAI47_00015 DNA replication/repair protein RecF 0.35 IAI47_00425 thiol:disulfide interchange protein DsbA — —
Serratia liquefaciens MT49 0.56 IAI46_00015 DNA replication/repair protein RecF 0.36 IAI46_24995 thiol:disulfide interchange protein DsbA low > 86
Erwinia tracheiphila HP pepo 2.2 0.56 IJEDHG_09800 recF DNA replication/repair protein RecF 0.36 IJEDHG_10985 dsbA thiol:disulfide interchange protein DsbA low > 61
Pantoea agglomerans CFBP13505 P0401 0.56 PagCFBP13505_RS19305 DNA replication/repair protein RecF 0.35 PagCFBP13505_RS18930 thiol:disulfide interchange protein DsbA — —
Erwinia tracheiphila SCR3 0.55 LU632_RS00015 recF DNA replication/repair protein RecF 0.36 LU632_RS23875 dsbA thiol:disulfide interchange protein DsbA low > 74
Rahnella sp. WP5 0.55 EX31_RS05975 DNA replication/repair protein RecF 0.36 EX31_RS15910 thiol:disulfide interchange protein DsbA low > 89
Pectobacterium carotovorum WPP14 0.55 HER17_RS00015 DNA replication/repair protein RecF 0.37 HER17_RS21475 thiol:disulfide interchange protein DsbA low > 75
Escherichia coli ECOR27 0.55 NOLOHH_07165 recF DNA replication/repair protein RecF 0.38 NOLOHH_06300 dsbA thiol:disulfide interchange protein DsbA 0.64 19
Escherichia coli ECRC62 0.55 BNILDI_04365 recF DNA replication/repair protein RecF 0.38 BNILDI_05230 dsbA thiol:disulfide interchange protein DsbA low > 75
Escherichia coli BL21 0.55 ECD_03583 gap repair protein 0.38 ECD_03746 periplasmic protein disulfide isomerase I low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.55 OHPLBJKB_00003 DNA replication and repair protein RecF 0.38 OHPLBJKB_04193 Thiol:disulfide interchange protein DsbA low > 74
Escherichia coli Nissle 1917 0.55 ECOLIN_RS21310 DNA replication/repair protein RecF 0.38 ECOLIN_RS22250 thiol:disulfide interchange protein DsbA low > 55
Escherichia coli ECOR38 0.55 HEPCGN_13720 recF DNA replication/repair protein RecF 0.38 HEPCGN_12805 dsbA thiol:disulfide interchange protein DsbA low > 88
Dickeya dadantii 3937 0.55 DDA3937_RS21285 DNA replication/repair protein RecF 0.37 DDA3937_RS00100 thiol:disulfide interchange protein DsbA 0.46 39
Escherichia coli BW25113 0.55 b3700 recF recombination protein F (NCBI) 0.38 b3860 dsbA periplasmic protein disulfide isomerase I (NCBI) low > 76
Escherichia fergusonii Becca 0.55 EFB2_00003 DNA replication and repair protein RecF 0.38 EFB2_04757 Thiol:disulfide interchange protein DsbA low > 86
Escherichia coli ECRC102 0.55 NIAGMN_12780 recF DNA replication/repair protein RecF 0.38 NIAGMN_11925 dsbA thiol:disulfide interchange protein DsbA low > 80
Escherichia coli ECRC99 0.55 KEDOAH_13125 recF DNA replication/repair protein RecF 0.38 KEDOAH_13980 dsbA thiol:disulfide interchange protein DsbA — —
Escherichia coli ECRC100 0.55 OKFHMN_15025 recF DNA replication/repair protein RecF 0.38 OKFHMN_14170 dsbA thiol:disulfide interchange protein DsbA 0.56 64
Escherichia coli ECRC101 0.55 MCAODC_05535 recF DNA replication/repair protein RecF 0.38 MCAODC_04670 dsbA thiol:disulfide interchange protein DsbA — —
Escherichia coli ECRC98 0.55 JDDGAC_18645 recF DNA replication/repair protein RecF 0.38 JDDGAC_17795 dsbA thiol:disulfide interchange protein DsbA low > 87
Dickeya dianthicola 67-19 0.55 HGI48_RS00015 DNA replication/repair protein RecF 0.37 HGI48_RS21265 thiol:disulfide interchange protein DsbA low > 71
Dickeya dianthicola ME23 0.55 DZA65_RS00015 DNA replication/repair protein RecF 0.36 DZA65_RS22240 thiol:disulfide interchange protein DsbA low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.54 GFF1756 DNA recombination and repair protein RecF 0.36 GFF2213 Periplasmic thiol:disulfide interchange protein DsbA low > 78
Klebsiella michiganensis M5al 0.54 BWI76_RS00010 DNA replication and repair protein RecF 0.35 BWI76_RS00345 protein disulfide oxidoreductase DsbA low > 92
Klebsiella pneumoniae MKP103 0.54 KDGMDA_08670 DNA replication/repair protein RecF 0.35 KDGMDA_08960 thiol:disulfide interchange protein DsbA — —
Enterobacter sp. TBS_079 0.54 MPMX20_00003 DNA replication and repair protein RecF 0.38 MPMX20_04603 Thiol:disulfide interchange protein DsbA — —
Enterobacter asburiae PDN3 0.54 EX28DRAFT_3987 DNA replication and repair protein RecF 0.37 EX28DRAFT_4341 Protein-disulfide isomerase low > 76
Shewanella loihica PV-4 0.46 Shew_0003 DNA replication and repair protein RecF (RefSeq) 0.38 Shew_0265 DSBA oxidoreductase (RefSeq) low > 60
Shewanella oneidensis MR-1 0.45 SO0010 recF DNA replication and repair protein RecF (NCBI ptt file) 0.36 SO0333 dsbA thiol:disulfide interchange protein DsbA (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.45 Shewana3_0011 recF recombination protein F (RefSeq) 0.35 Shewana3_3838 DSBA oxidoreductase (RefSeq) low > 73
Shewanella amazonensis SB2B 0.44 Sama_0015 recF recombination protein F (RefSeq) 0.36 Sama_3321 thiol:disulfide interchange protein DsbA (RefSeq) low > 62
Pseudomonas aeruginosa PA14 0.38 IKLFDK_25545 DNA replication/repair protein RecF 0.21 IKLFDK_25970 thiol:disulfide interchange protein DsbA low > 100
Pseudomonas sp. S08-1 0.38 OH686_12620 DNA recombination and repair protein RecF 0.21 OH686_12195 Periplasmic thiol:disulfide interchange protein DsbA low > 80
Pseudomonas stutzeri RCH2 0.38 Psest_0004 recF protein 0.19 Psest_0186 Protein-disulfide isomerase low > 67
Pseudomonas fluorescens FW300-N1B4 0.38 Pf1N1B4_1927 DNA recombination and repair protein RecF 0.20 Pf1N1B4_1879 Periplasmic thiol:disulfide interchange protein DsbA — —
Pseudomonas sp. BP01 0.38 JOY50_RS08340 recF DNA replication/repair protein RecF 0.21 JOY50_RS21090 dsbA thiol:disulfide interchange protein DsbA low > 84
Pseudomonas syringae pv. syringae B728a 0.38 Psyr_0003 DNA replication and repair protein RecF 0.18 Psyr_0268 DSBA oxidoreductase low > 86
Pseudomonas lactucae CFBP13502 0.38 GEMAOFIL_00183 DNA replication and repair protein RecF 0.20 GEMAOFIL_00288 Thiol:disulfide interchange protein DsbA — —
Pseudomonas sp. RS175 0.38 PFR28_04593 DNA replication and repair protein RecF 0.20 PFR28_04628 Thiol:disulfide interchange protein DsbA low > 88
Pseudomonas sp. DMC3 0.38 GFF578 DNA replication and repair protein RecF 0.19 GFF627 Thiol:disulfide interchange protein DsbA — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.38 Psyr_0003 DNA replication and repair protein RecF 0.18 Psyr_0268 DSBA oxidoreductase — —
Pseudomonas fluorescens FW300-N2C3 0.37 AO356_11635 recombinase RecF 0.21 AO356_11445 thiol:disulfide interchange protein — —
Pseudomonas fluorescens SBW25-INTG 0.37 PFLU_RS00015 DNA replication/repair protein RecF 0.20 PFLU_RS00415 thiol:disulfide interchange protein DsbA/DsbL low > 109
Pseudomonas fluorescens SBW25 0.37 PFLU_RS00015 DNA replication/repair protein RecF 0.20 PFLU_RS00415 thiol:disulfide interchange protein DsbA/DsbL low > 109
Pseudomonas fluorescens FW300-N2E3 0.37 AO353_10480 recombinase RecF 0.21 AO353_10950 thiol:disulfide interchange protein low > 101
Pseudomonas sp. SVBP6 0.37 COO64_RS02120 recF DNA replication/repair protein RecF 0.22 COO64_RS02495 dsbA thiol:disulfide interchange protein DsbA low > 93
Pseudomonas putida KT2440 0.37 PP_0012 DNA replication and repair protein 0.21 PP_0127 Thiol:disulfide interchange protein 0.19 44
Pseudomonas simiae WCS417 0.37 PS417_00015 recombinase RecF 0.20 PS417_00425 thiol:disulfide interchange protein — —
Pseudomonas fluorescens FW300-N2E2 0.36 Pf6N2E2_4197 DNA recombination and repair protein RecF 0.22 Pf6N2E2_4158 Periplasmic thiol:disulfide interchange protein DsbA — —
Alteromonas macleodii MIT1002 0.35 MIT1002_00003 DNA replication and repair protein RecF 0.34 MIT1002_00714 Thiol:disulfide interchange protein DsbA precursor — —
Kangiella aquimarina DSM 16071 0.32 B158DRAFT_0366 DNA replication and repair protein RecF 0.20 B158DRAFT_0392 Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis low > 40
Acinetobacter radioresistens SK82 0.30 MPMX26_00003 DNA replication and repair protein RecF 0.22 MPMX26_03125 Thiol:disulfide interchange protein DsbA low > 36
Marinobacter adhaerens HP15 0.29 HP15_3705 DNA replication and repair protein recF 0.22 HP15_3325 DSBA oxidoreductase low > 73
Acinetobacter baumannii LAC-4 0.29 RR41_RS00015 DNA replication/repair protein RecF 0.23 RR41_RS18720 thiol:disulfide interchange protein DsbA/DsbL — —
Rhodanobacter denitrificans MT42 0.25 LRK55_RS08240 DNA replication/repair protein RecF 0.15 LRK55_RS06960 thiol:disulfide interchange protein DsbA/DsbL low > 63
Rhodanobacter sp000427505 FW510-R12 0.25 LRK53_RS00015 DNA replication/repair protein RecF 0.15 LRK53_RS01165 thiol:disulfide interchange protein DsbA/DsbL low > 59
Rhodanobacter denitrificans FW104-10B01 0.25 LRK54_RS08475 DNA replication/repair protein RecF 0.15 LRK54_RS07225 thiol:disulfide interchange protein DsbA/DsbL low > 59

Not shown: 37 genomes with orthologs for CSW01_00065 only; 16 genomes with orthologs for CSW01_00170 only