Conservation of cofitness between CSW01_06130 and CSW01_00140 in Vibrio cholerae E7946 ATCC 55056

62 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_06130 DNA polymerase II 1.0 CSW01_00140 dihydroxy-acid dehydratase 0.43 20
Pseudomonas sp. S08-1 0.52 OH686_16850 DNA polymerase II 0.76 OH686_14100 dihydroxy-acid dehydratase low > 80
Pseudomonas sp. BP01 0.51 JOY50_RS10610 DNA polymerase II 0.77 JOY50_RS20745 ilvD dihydroxy-acid dehydratase low > 84
Pseudomonas fluorescens GW456-L13 0.51 PfGW456L13_2472 DNA polymerase II (EC 2.7.7.7) 0.76 PfGW456L13_973 Dihydroxy-acid dehydratase (EC 4.2.1.9) low > 87
Erwinia tracheiphila HP pepo 2.2 0.51 IJEDHG_06070 polB DNA polymerase II 0.82 IJEDHG_09115 ilvD dihydroxy-acid dehydratase low > 61
Dickeya dadantii 3937 0.51 DDA3937_RS18230 DNA polymerase II 0.84 DDA3937_RS20155 dihydroxy-acid dehydratase low > 74
Erwinia tracheiphila SCR3 0.51 LU632_RS02810 polB DNA polymerase II 0.82 LU632_RS24400 ilvD dihydroxy-acid dehydratase low > 74
Rahnella sp. WP5 0.51 EX31_RS03740 DNA polymerase II 0.80 EX31_RS15005 dihydroxy-acid dehydratase low > 89
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.51 GFF182 DNA polymerase II (EC 2.7.7.7) 0.84 GFF2901 Dihydroxy-acid dehydratase (EC 4.2.1.9) low > 78
Pseudomonas putida KT2440 0.51 PP_2393 DNA polymerase II 0.77 PP_5128 Dihydroxy-acid dehydratase low > 96
Pseudomonas lactucae CFBP13502 0.51 GEMAOFIL_02129 DNA polymerase II 0.76 GEMAOFIL_05518 Dihydroxy-acid dehydratase low > 93
Pseudomonas fluorescens FW300-N1B4 0.51 Pf1N1B4_87 DNA polymerase II (EC 2.7.7.7) 0.76 Pf1N1B4_2303 Dihydroxy-acid dehydratase (EC 4.2.1.9) low > 87
Pseudomonas fluorescens FW300-N2E3 0.50 AO353_29350 DNA polymerase II 0.76 AO353_08345 dihydroxy-acid dehydratase low > 101
Escherichia coli HS(pFamp)R (ATCC 700891) 0.50 OHPLBJKB_03598 DNA polymerase II 0.84 OHPLBJKB_04282 Dihydroxy-acid dehydratase low > 74
Escherichia coli BW25113 0.50 b0060 polB DNA polymerase II (NCBI) 0.85 b3771 ilvD dihydroxy-acid dehydratase (NCBI) low > 76
Pseudomonas sp. RS175 0.50 PFR28_01299 DNA polymerase II 0.76 PFR28_04278 Dihydroxy-acid dehydratase low > 88
Escherichia coli BL21 0.50 ECD_00062 DNA polymerase II 0.84 ECD_03649 dihydroxyacid dehydratase low > 61
Escherichia coli Nissle 1917 0.50 ECOLIN_RS00320 DNA polymerase II 0.85 ECOLIN_RS21665 dihydroxy-acid dehydratase low > 55
Pseudomonas sp. DMC3 0.50 GFF1404 DNA polymerase II 0.76 GFF246 Dihydroxy-acid dehydratase 0.71 29
Erwinia amylovora T8 0.50 OLJFJH_01335 DNA polymerase II 0.84 OLJFJH_06230 dihydroxy-acid dehydratase low > 58
Escherichia coli ECRC99 0.50 KEDOAH_17360 polB DNA polymerase II 0.85 KEDOAH_13510 ilvD dihydroxy-acid dehydratase — —
Pseudomonas sp. SVBP6 0.50 COO64_RS07850 DNA polymerase II 0.76 COO64_RS12815 ilvD dihydroxy-acid dehydratase low > 93
Pseudomonas syringae pv. syringae B728a 0.50 Psyr_2361 DNA damage-inducible DNA polymerase II 0.76 Psyr_0469 dihydroxyacid dehydratase low > 86
Escherichia coli ECRC98 0.50 JDDGAC_14390 polB DNA polymerase II 0.85 JDDGAC_18260 ilvD dihydroxy-acid dehydratase low > 87
Escherichia coli ECRC101 0.50 MCAODC_01310 polB DNA polymerase II 0.85 MCAODC_05145 ilvD dihydroxy-acid dehydratase low > 88
Pseudomonas syringae pv. syringae B728a ΔmexB 0.50 Psyr_2361 DNA damage-inducible DNA polymerase II 0.76 Psyr_0469 dihydroxyacid dehydratase low > 86
Escherichia coli ECRC100 0.50 OKFHMN_10795 polB DNA polymerase II 0.85 OKFHMN_14640 ilvD dihydroxy-acid dehydratase low > 79
Dickeya dianthicola ME23 0.50 DZA65_RS19305 DNA polymerase II 0.83 DZA65_RS21335 dihydroxy-acid dehydratase low > 75
Escherichia coli ECRC102 0.50 NIAGMN_08645 polB DNA polymerase II 0.85 NIAGMN_12395 ilvD dihydroxy-acid dehydratase low > 80
Escherichia coli ECRC62 0.50 BNILDI_08465 polB DNA polymerase II 0.85 BNILDI_04750 ilvD dihydroxy-acid dehydratase low > 75
Escherichia coli ECOR38 0.50 HEPCGN_08785 polB DNA polymerase II 0.84 HEPCGN_13350 ilvD dihydroxy-acid dehydratase low > 88
Pseudomonas fluorescens FW300-N2E2 0.50 Pf6N2E2_2137 DNA polymerase II (EC 2.7.7.7) 0.76 Pf6N2E2_4564 Dihydroxy-acid dehydratase (EC 4.2.1.9) low > 103
Escherichia fergusonii Becca 0.50 EFB2_03985 DNA polymerase II 0.85 EFB2_04865 Dihydroxy-acid dehydratase low > 86
Pseudomonas simiae WCS417 0.50 PS417_09565 DNA polymerase II 0.77 PS417_26890 dihydroxy-acid dehydratase low > 88
Escherichia coli ECOR27 0.50 NOLOHH_03140 polB DNA polymerase II 0.85 NOLOHH_06775 ilvD dihydroxy-acid dehydratase low > 76
Dickeya dianthicola 67-19 0.50 HGI48_RS18165 DNA polymerase II 0.83 HGI48_RS20295 dihydroxy-acid dehydratase low > 71
Serratia liquefaciens MT49 0.50 IAI46_03280 DNA polymerase II 0.82 IAI46_24345 dihydroxy-acid dehydratase low > 86
Pseudomonas aeruginosa PA14 0.50 IKLFDK_09200 DNA polymerase II 0.77 IKLFDK_23670 dihydroxy-acid dehydratase low > 100
Pseudomonas fluorescens FW300-N2C3 0.50 AO356_01325 DNA polymerase II 0.76 AO356_13250 dihydroxy-acid dehydratase low > 104
Enterobacter asburiae PDN3 0.50 EX28DRAFT_3652 DNA polymerase elongation subunit (family B) 0.84 EX28DRAFT_4443 dihydroxy-acid dehydratase low > 76
Klebsiella pneumoniae MKP103 0.50 KDGMDA_12800 DNA polymerase II 0.85 KDGMDA_09490 dihydroxy-acid dehydratase low > 95
Paraburkholderia graminis OAS925 0.49 ABIE53_004018 DNA polymerase-2 0.74 ABIE53_006513 dihydroxy-acid dehydratase low > 113
Klebsiella michiganensis M5al 0.49 BWI76_RS04575 DNA polymerase II 0.85 BWI76_RS00975 dihydroxy-acid dehydratase low > 92
Paraburkholderia bryophila 376MFSha3.1 0.49 H281DRAFT_01369 DNA damage-inducible DNA polymerase II 0.74 H281DRAFT_05312 dihydroxyacid dehydratase low > 103
Pseudomonas stutzeri RCH2 0.49 Psest_1519 DNA polymerase elongation subunit (family B) 0.76 Psest_0234 dihydroxy-acid dehydratase — —
Burkholderia phytofirmans PsJN 0.49 BPHYT_RS23105 DNA polymerase 0.70 BPHYT_RS10100 dihydroxy-acid dehydratase low > 109
Enterobacter sp. TBS_079 0.49 MPMX20_00754 DNA polymerase II 0.84 MPMX20_04499 Dihydroxy-acid dehydratase low > 85
Pseudomonas fluorescens SBW25 0.49 PFLU_RS10185 DNA polymerase II 0.76 PFLU_RS28535 dihydroxy-acid dehydratase low > 109
Pseudomonas fluorescens SBW25-INTG 0.49 PFLU_RS10185 DNA polymerase II 0.76 PFLU_RS28535 dihydroxy-acid dehydratase low > 109
Cupriavidus basilensis FW507-4G11 0.49 RR42_RS09335 DNA polymerase II 0.29 RR42_RS16210 dihydroxy-acid dehydratase — —
Pantoea sp. MT58 0.49 IAI47_16050 DNA polymerase II 0.83 IAI47_01035 dihydroxy-acid dehydratase low > 76
Pantoea agglomerans CFBP13505 P0401 0.49 PagCFBP13505_RS12945 DNA polymerase II 0.84 PagCFBP13505_RS20930 dihydroxy-acid dehydratase low > 74
Paraburkholderia sabiae LMG 24235 0.48 QEN71_RS13385 DNA polymerase II 0.73 QEN71_RS21095 dihydroxy-acid dehydratase low > 153
Herbaspirillum seropedicae SmR1 0.48 HSERO_RS12200 DNA polymerase II 0.73 HSERO_RS02650 dihydroxy-acid dehydratase low > 78
Pectobacterium carotovorum WPP14 0.48 HER17_RS02995 DNA polymerase II 0.85 HER17_RS01075 dihydroxy-acid dehydratase low > 75
Variovorax sp. SCN45 0.46 GFF7213 DNA polymerase II (EC 2.7.7.7) 0.31 GFF471 Dihydroxy-acid dehydratase (EC 4.2.1.9) — —
Alteromonas macleodii MIT1002 0.42 MIT1002_03358 DNA polymerase II 0.78 MIT1002_04041 Dihydroxy-acid dehydratase low > 70
Shewanella amazonensis SB2B 0.41 Sama_1250 DNA polymerase II (RefSeq) 0.79 Sama_3279 dihydroxy-acid dehydratase (RefSeq) low > 62
Shewanella sp. ANA-3 0.41 Shewana3_2629 DNA polymerase II (RefSeq) 0.79 Shewana3_0358 dihydroxy-acid dehydratase (RefSeq) low > 73
Shewanella loihica PV-4 0.40 Shew_2482 DNA polymerase II (RefSeq) 0.78 Shew_0292 dihydroxy-acid dehydratase (RefSeq) low > 60
Shewanella oneidensis MR-1 0.40 SO1820 polB DNA polymerase II (NCBI ptt file) 0.78 SO4345 ilvD dihydroxy-acid dehydratase (NCBI ptt file) low > 76
Methanococcus maripaludis S2 0.08 MMP_RS02025 DNA-directed DNA polymerase 0.34 MMP_RS01700 dihydroxy-acid dehydratase low > 25
Methanococcus maripaludis JJ 0.08 MMJJ_RS03280 DNA-directed DNA polymerase 0.34 MMJJ_RS03675 dihydroxy-acid dehydratase — —

Not shown: 0 genomes with orthologs for CSW01_06130 only; 56 genomes with orthologs for CSW01_00140 only